RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 PLCH1Q4KWH8 1693 aa19■□□□□ 0.63
CYB561A3-216ENST00000540755 ALS2Q96Q42 1657 aa18.98■□□□□ 0.63
CYB561A3-216ENST00000540755 POLKQ9UBT6 870 aa18.97■□□□□ 0.63
CYB561A3-216ENST00000540755 CABLES1Q8TDN4 633 aa18.97■□□□□ 0.63
CYB561A3-216ENST00000540755 ARHGEF10O15013 1369 aa18.96■□□□□ 0.63
CYB561A3-216ENST00000540755 NWD2Q9ULI1 1742 aa18.96■□□□□ 0.63
CYB561A3-216ENST00000540755 GJD4Q96KN9 370 aaPredicted RBP18.96■□□□□ 0.63
CYB561A3-216ENST00000540755 PSME1Q06323 249 aa18.95■□□□□ 0.62
CYB561A3-216ENST00000540755 UNC5CLQ8IV45 518 aa18.95■□□□□ 0.62
CYB561A3-216ENST00000540755 CRYBG1Q9Y4K1 1723 aa18.94■□□□□ 0.62
CYB561A3-216ENST00000540755 SRCAPQ6ZRS2 3230 aa18.94■□□□□ 0.62
CYB561A3-216ENST00000540755 NRAPQ86VF7 1730 aa18.92■□□□□ 0.62
CYB561A3-216ENST00000540755 NUDCQ9Y266 331 aa18.92■□□□□ 0.62
CYB561A3-216ENST00000540755 FBLN1P23142 703 aa18.91■□□□□ 0.62
CYB561A3-216ENST00000540755 EMILIN1Q9Y6C2 1016 aa18.91■□□□□ 0.62
CYB561A3-216ENST00000540755 BRWD3Q6RI45 1802 aa18.91■□□□□ 0.62
CYB561A3-216ENST00000540755 PEAK1Q9H792 1746 aa18.91■□□□□ 0.62
CYB561A3-216ENST00000540755 DIAPH1O60610 1272 aaKnown RBP18.9■□□□□ 0.62
CYB561A3-216ENST00000540755 PAK3O75914 559 aaPredicted RBP18.9■□□□□ 0.62
CYB561A3-216ENST00000540755 NLRP6P59044 892 aa18.9■□□□□ 0.62
CYB561A3-216ENST00000540755 ABTB2Q8N961 1025 aa18.9■□□□□ 0.62
CYB561A3-216ENST00000540755 PLEKHG5O94827 1062 aa18.9■□□□□ 0.62
CYB561A3-216ENST00000540755 RRS1Q15050 365 aaKnown RBP18.89■□□□□ 0.61
CYB561A3-216ENST00000540755 LMOD2Q6P5Q4 547 aa18.89■□□□□ 0.61
CYB561A3-216ENST00000540755 HAP1P54257 671 aaPredicted RBP18.88■□□□□ 0.61
CYB561A3-216ENST00000540755 PPM1GO15355 546 aaPredicted RBP18.87■□□□□ 0.61
CYB561A3-216ENST00000540755 VPS72Q15906 364 aa18.87■□□□□ 0.61
CYB561A3-216ENST00000540755 KIF24Q5T7B8 1368 aa18.87■□□□□ 0.61
CYB561A3-216ENST00000540755 LTN1O94822 1766 aa18.86■□□□□ 0.61
CYB561A3-216ENST00000540755 SLIT3O75094 1523 aa18.86■□□□□ 0.61
CYB561A3-216ENST00000540755 FAM83GA6ND36 823 aa18.86■□□□□ 0.61
CYB561A3-216ENST00000540755 U2AF1L5P0DN76 240 aaPredicted RBP18.86■□□□□ 0.61
CYB561A3-216ENST00000540755 U2AF1Q01081 240 aaKnown RBP eCLIP18.86■□□□□ 0.61
CYB561A3-216ENST00000540755 NGEFQ8N5V2 710 aa18.86■□□□□ 0.61
CYB561A3-216ENST00000540755 COL14A1Q05707 1796 aaKnown RBP18.86■□□□□ 0.61
CYB561A3-216ENST00000540755 NFAT5O94916 1531 aa18.86■□□□□ 0.61
CYB561A3-216ENST00000540755 CCDC146Q8IYE0 955 aa18.85■□□□□ 0.61
CYB561A3-216ENST00000540755 RUNDC1Q96C34 613 aa18.85■□□□□ 0.61
CYB561A3-216ENST00000540755 PHRF1Q9P1Y6 1649 aaKnown RBP18.85■□□□□ 0.61
CYB561A3-216ENST00000540755 PDE3BQ13370 1112 aa18.84■□□□□ 0.61
CYB561A3-216ENST00000540755 MAP3K19Q56UN5 1328 aa18.84■□□□□ 0.61
CYB561A3-216ENST00000540755 FLT4P35916 1363 aa18.84■□□□□ 0.61
CYB561A3-216ENST00000540755 U2SURPO15042 1029 aaKnown RBP18.84■□□□□ 0.61
CYB561A3-216ENST00000540755 IL13P35225 146 aa18.84■□□□□ 0.61
CYB561A3-216ENST00000540755 NUTM2GQ5VZR2 741 aa18.84■□□□□ 0.61
CYB561A3-216ENST00000540755 RGPD1P0DJD0 1748 aa18.82■□□□□ 0.6
CYB561A3-216ENST00000540755 SENP3-EIF4A1A0A087X0R7 540 aa18.82■□□□□ 0.6
CYB561A3-216ENST00000540755 APAF1O14727 1248 aa18.82■□□□□ 0.6
CYB561A3-216ENST00000540755 ONECUT3O60422 494 aaPredicted RBP18.82■□□□□ 0.6
CYB561A3-216ENST00000540755 KCNH5Q8NCM2 988 aa18.82■□□□□ 0.6
CYB561A3-216ENST00000540755 PNNQ9H307 717 aaKnown RBP18.82■□□□□ 0.6
CYB561A3-216ENST00000540755 USP19O94966 1318 aa18.82■□□□□ 0.6
CYB561A3-216ENST00000540755 RTL1A6NKG5 1358 aa18.81■□□□□ 0.6
CYB561A3-216ENST00000540755 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
CYB561A3-216ENST00000540755 SEPT12Q8IYM1 358 aa18.81■□□□□ 0.6
CYB561A3-216ENST00000540755 SOX12O15370 315 aa18.8■□□□□ 0.6
CYB561A3-216ENST00000540755 PLEKHF1Q96S99 279 aa18.8■□□□□ 0.6
CYB561A3-216ENST00000540755 SALL2Q9Y467 1007 aaPredicted RBP18.8■□□□□ 0.6
CYB561A3-216ENST00000540755 ZNF521Q96K83 1311 aa18.8■□□□□ 0.6
CYB561A3-216ENST00000540755 FCHSD2O94868 740 aa18.79■□□□□ 0.6
CYB561A3-216ENST00000540755 AMPHP49418 695 aa18.78■□□□□ 0.6
CYB561A3-216ENST00000540755 EIF4A2Q14240 407 aaKnown RBP18.78■□□□□ 0.6
CYB561A3-216ENST00000540755 CCDC125Q86Z20 511 aa18.78■□□□□ 0.6
CYB561A3-216ENST00000540755 BTG4Q9NY30 223 aa18.78■□□□□ 0.6
CYB561A3-216ENST00000540755 THSD7AQ9UPZ6 1657 aa18.78■□□□□ 0.6
CYB561A3-216ENST00000540755 HSP90AB2PQ58FF8 381 aa18.77■□□□□ 0.6
CYB561A3-216ENST00000540755 TCP11L2Q8N4U5 519 aa18.77■□□□□ 0.59
CYB561A3-216ENST00000540755 RSPH6AQ9H0K4 717 aa18.77■□□□□ 0.59
CYB561A3-216ENST00000540755 CCDC9Q9Y3X0 531 aaKnown RBP18.77■□□□□ 0.59
CYB561A3-216ENST00000540755 HOXC9P31274 260 aa18.76■□□□□ 0.59
CYB561A3-216ENST00000540755 KIAA0232Q92628 1395 aa18.76■□□□□ 0.59
CYB561A3-216ENST00000540755 GCP02774 474 aa18.75■□□□□ 0.59
CYB561A3-216ENST00000540755 CCDC27Q2M243 656 aa18.75■□□□□ 0.59
CYB561A3-216ENST00000540755 MAPK8IP3Q9UPT6 1336 aa18.75■□□□□ 0.59
CYB561A3-216ENST00000540755 SPATA31A5Q5VU36 1347 aa18.74■□□□□ 0.59
CYB561A3-216ENST00000540755 SPATA31A7Q8IWB4 1347 aa18.74■□□□□ 0.59
CYB561A3-216ENST00000540755 FAM98CQ17RN3 349 aaKnown RBP18.73■□□□□ 0.59
CYB561A3-216ENST00000540755 KRT27Q7Z3Y8 459 aa18.73■□□□□ 0.59
CYB561A3-216ENST00000540755 PRDM11Q9NQV5 511 aa18.73■□□□□ 0.59
CYB561A3-216ENST00000540755 PRKAR2BP31323 418 aa18.72■□□□□ 0.59
CYB561A3-216ENST00000540755 IP6K1Q92551 441 aa18.72■□□□□ 0.59
CYB561A3-216ENST00000540755 NEFMP07197 916 aa18.71■□□□□ 0.59
CYB561A3-216ENST00000540755 GOLGA2Q08379 1002 aa18.71■□□□□ 0.59
CYB561A3-216ENST00000540755 DEFB132Q7Z7B7 95 aa18.71■□□□□ 0.59
CYB561A3-216ENST00000540755 ARHGEF25Q86VW2 580 aa18.71■□□□□ 0.59
CYB561A3-216ENST00000540755 GTF3C3Q9Y5Q9 886 aa18.71■□□□□ 0.59
CYB561A3-216ENST00000540755 LMO7Q8WWI1 1683 aa18.71■□□□□ 0.59
CYB561A3-216ENST00000540755 HMOX1P09601 288 aa18.71■□□□□ 0.59
CYB561A3-216ENST00000540755 WWC1Q8IX03 1113 aa18.71■□□□□ 0.59
CYB561A3-216ENST00000540755 ABCC6O95255 1503 aa18.7■□□□□ 0.58
CYB561A3-216ENST00000540755 TMPOP42166 694 aaKnown RBP18.7■□□□□ 0.58
CYB561A3-216ENST00000540755 CHRNA2Q15822 529 aa18.7■□□□□ 0.58
CYB561A3-216ENST00000540755 CDCA7LQ96GN5 454 aa18.7■□□□□ 0.58
CYB561A3-216ENST00000540755 DLG5Q8TDM6 1919 aa18.69■□□□□ 0.58
CYB561A3-216ENST00000540755 KDRP35968 1356 aa18.69■□□□□ 0.58
CYB561A3-216ENST00000540755 IGSF1Q8N6C5 1336 aa18.69■□□□□ 0.58
CYB561A3-216ENST00000540755 RRP7AQ9Y3A4 280 aaKnown RBP18.69■□□□□ 0.58
CYB561A3-216ENST00000540755 A0A0G2JS52 829 aa18.68■□□□□ 0.58
CYB561A3-216ENST00000540755 MYT1Q01538 1121 aa18.68■□□□□ 0.58
CYB561A3-216ENST00000540755 COL18A1P39060 1754 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms