RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 HDGFL2Q7Z4V5 671 aaPredicted RBP16■□□□□ 0.15
CYB561A3-215ENST00000540317 CPDO75976 1380 aa16■□□□□ 0.15
CYB561A3-215ENST00000540317 SPATA31A1Q5TZJ5 1347 aa16■□□□□ 0.15
CYB561A3-215ENST00000540317 TTC21AQ8NDW8 1320 aa16■□□□□ 0.15
CYB561A3-215ENST00000540317 PHRF1Q9P1Y6 1649 aaKnown RBP16■□□□□ 0.15
CYB561A3-215ENST00000540317 LARP1Q6PKG0 1096 aaKnown RBP16■□□□□ 0.15
CYB561A3-215ENST00000540317 CPSF1Q10570 1443 aaKnown RBP15.99■□□□□ 0.15
CYB561A3-215ENST00000540317 SF3B2Q13435 895 aaKnown RBP15.99■□□□□ 0.15
CYB561A3-215ENST00000540317 KCNH5Q8NCM2 988 aa15.99■□□□□ 0.15
CYB561A3-215ENST00000540317 TERF2IPQ9NYB0 399 aa15.99■□□□□ 0.15
CYB561A3-215ENST00000540317 NRAPQ86VF7 1730 aa15.98■□□□□ 0.15
CYB561A3-215ENST00000540317 CC2D1BQ5T0F9 858 aaKnown RBP15.98■□□□□ 0.15
CYB561A3-215ENST00000540317 EP400Q96L91 3159 aa15.98■□□□□ 0.15
CYB561A3-215ENST00000540317 AMER1Q5JTC6 1135 aaPredicted RBP15.97■□□□□ 0.15
CYB561A3-215ENST00000540317 FAM182BQ5T319 152 aa15.97■□□□□ 0.15
CYB561A3-215ENST00000540317 SUPT16HQ9Y5B9 1047 aaKnown RBP15.97■□□□□ 0.15
CYB561A3-215ENST00000540317 NRKQ7Z2Y5 1582 aa15.96■□□□□ 0.15
CYB561A3-215ENST00000540317 CAMTA1Q9Y6Y1 1673 aa15.96■□□□□ 0.15
CYB561A3-215ENST00000540317 TCP11L2Q8N4U5 519 aa15.96■□□□□ 0.14
CYB561A3-215ENST00000540317 ZRANB1Q9UGI0 708 aa15.96■□□□□ 0.14
CYB561A3-215ENST00000540317 BLMP54132 1417 aaPredicted RBP15.95■□□□□ 0.14
CYB561A3-215ENST00000540317 BRWD3Q6RI45 1802 aa15.95■□□□□ 0.14
CYB561A3-215ENST00000540317 NME9Q86XW9 330 aa15.95■□□□□ 0.14
CYB561A3-215ENST00000540317 AATKQ6ZMQ8 1374 aa15.94■□□□□ 0.14
CYB561A3-215ENST00000540317 BARGINQ6ZT62 677 aa15.94■□□□□ 0.14
CYB561A3-215ENST00000540317 ARHGEF25Q86VW2 580 aa15.94■□□□□ 0.14
CYB561A3-215ENST00000540317 PDE3BQ13370 1112 aa15.93■□□□□ 0.14
CYB561A3-215ENST00000540317 TOM1L2Q6ZVM7 507 aa15.93■□□□□ 0.14
CYB561A3-215ENST00000540317 DEFB132Q7Z7B7 95 aa15.93■□□□□ 0.14
CYB561A3-215ENST00000540317 AXIN2Q9Y2T1 843 aa15.93■□□□□ 0.14
CYB561A3-215ENST00000540317 PIK3C2AO00443 1686 aa15.93■□□□□ 0.14
CYB561A3-215ENST00000540317 NINLQ9Y2I6 1382 aa15.93■□□□□ 0.14
CYB561A3-215ENST00000540317 SLIT3O75094 1523 aa15.93■□□□□ 0.14
CYB561A3-215ENST00000540317 THRAP3Q9Y2W1 955 aaKnown RBP15.92■□□□□ 0.14
CYB561A3-215ENST00000540317 CD163L1Q9NR16 1453 aa15.92■□□□□ 0.14
CYB561A3-215ENST00000540317 CSB-PGBD3P0DP91 1061 aa15.92■□□□□ 0.14
CYB561A3-215ENST00000540317 A0A1W2PP64 1363 aa15.91■□□□□ 0.14
CYB561A3-215ENST00000540317 AKAP12Q02952 1782 aa15.91■□□□□ 0.14
CYB561A3-215ENST00000540317 PELP1Q8IZL8 1130 aaKnown RBP15.91■□□□□ 0.14
CYB561A3-215ENST00000540317 COL5A2P05997 1499 aaPredicted RBP15.91■□□□□ 0.14
CYB561A3-215ENST00000540317 PPP2R1AP30153 589 aa15.9■□□□□ 0.14
CYB561A3-215ENST00000540317 EDC4Q6P2E9 1401 aaKnown RBP15.9■□□□□ 0.14
CYB561A3-215ENST00000540317 LMO7Q8WWI1 1683 aa15.89■□□□□ 0.13
CYB561A3-215ENST00000540317 CRB1P82279 1406 aa15.89■□□□□ 0.13
CYB561A3-215ENST00000540317 SMG6Q86US8 1419 aaKnown RBP15.89■□□□□ 0.13
CYB561A3-215ENST00000540317 USP31Q70CQ4 1352 aa15.89■□□□□ 0.13
CYB561A3-215ENST00000540317 FKBP8Q14318 412 aa15.89■□□□□ 0.13
CYB561A3-215ENST00000540317 FAM196AQ6ZSG2 479 aa15.89■□□□□ 0.13
CYB561A3-215ENST00000540317 BAG6P46379 1132 aa15.88■□□□□ 0.13
CYB561A3-215ENST00000540317 ERICH6BQ5W0A0 696 aa15.88■□□□□ 0.13
CYB561A3-215ENST00000540317 WDR17Q8IZU2 1322 aa15.88■□□□□ 0.13
CYB561A3-215ENST00000540317 CARD14Q9BXL6 1004 aa15.87■□□□□ 0.13
CYB561A3-215ENST00000540317 MON2Q7Z3U7 1717 aa15.86■□□□□ 0.13
CYB561A3-215ENST00000540317 ANKRD36BQ8N2N9 1353 aa15.86■□□□□ 0.13
CYB561A3-215ENST00000540317 THSD7AQ9UPZ6 1657 aa15.86■□□□□ 0.13
CYB561A3-215ENST00000540317 TRIM37O94972 964 aa15.86■□□□□ 0.13
CYB561A3-215ENST00000540317 COG3Q96JB2 828 aa15.86■□□□□ 0.13
CYB561A3-215ENST00000540317 EN1Q05925 392 aaPredicted RBP15.85■□□□□ 0.13
CYB561A3-215ENST00000540317 NUDCQ9Y266 331 aa15.85■□□□□ 0.13
CYB561A3-215ENST00000540317 NSD2O96028 1365 aa15.85■□□□□ 0.13
CYB561A3-215ENST00000540317 DDB1Q16531 1140 aa15.84■□□□□ 0.13
CYB561A3-215ENST00000540317 CARD10Q9BWT7 1032 aa15.84■□□□□ 0.13
CYB561A3-215ENST00000540317 NSD3Q9BZ95 1437 aa15.84■□□□□ 0.13
CYB561A3-215ENST00000540317 CGNL1Q0VF96 1302 aa15.84■□□□□ 0.13
CYB561A3-215ENST00000540317 WDR43Q15061 677 aaKnown RBP eCLIP15.83■□□□□ 0.13
CYB561A3-215ENST00000540317 NLRP2Q9NX02 1062 aa15.83■□□□□ 0.13
CYB561A3-215ENST00000540317 NFAT5O94916 1531 aa15.83■□□□□ 0.12
CYB561A3-215ENST00000540317 APBA3O96018 575 aa15.83■□□□□ 0.12
CYB561A3-215ENST00000540317 CDCA7Q9BWT1 371 aaPredicted RBP15.83■□□□□ 0.12
CYB561A3-215ENST00000540317 COL18A1P39060 1754 aa15.82■□□□□ 0.12
CYB561A3-215ENST00000540317 FBLN1P23142 703 aa15.81■□□□□ 0.12
CYB561A3-215ENST00000540317 ANKRD24Q8TF21 1146 aa15.81■□□□□ 0.12
CYB561A3-215ENST00000540317 GGNBP2Q9H3C7 697 aa15.81■□□□□ 0.12
CYB561A3-215ENST00000540317 EXOC5O00471 708 aa15.8■□□□□ 0.12
CYB561A3-215ENST00000540317 FYB1O15117 783 aa15.8■□□□□ 0.12
CYB561A3-215ENST00000540317 ERBB3P21860 1342 aa15.8■□□□□ 0.12
CYB561A3-215ENST00000540317 OVOS2A0A0J9YW53 1432 aa15.8■□□□□ 0.12
CYB561A3-215ENST00000540317 OVOS2Q6IE36 1432 aa15.8■□□□□ 0.12
CYB561A3-215ENST00000540317 AMPHP49418 695 aa15.79■□□□□ 0.12
CYB561A3-215ENST00000540317 MORC1Q86VD1 984 aa15.79■□□□□ 0.12
CYB561A3-215ENST00000540317 LTV1Q96GA3 475 aaPredicted RBP15.79■□□□□ 0.12
CYB561A3-215ENST00000540317 EZH2Q15910 746 aaKnown RBP15.79■□□□□ 0.12
CYB561A3-215ENST00000540317 IP6K1Q92551 441 aa15.79■□□□□ 0.12
CYB561A3-215ENST00000540317 ADAMTS8Q9UP79 889 aa15.78■□□□□ 0.12
CYB561A3-215ENST00000540317 RGPD5Q99666 1765 aa15.78■□□□□ 0.12
CYB561A3-215ENST00000540317 NGEFQ8N5V2 710 aa15.77■□□□□ 0.11
CYB561A3-215ENST00000540317 MARCH10Q8NA82 808 aaPredicted RBP15.77■□□□□ 0.11
CYB561A3-215ENST00000540317 MAP3K19Q56UN5 1328 aa15.77■□□□□ 0.11
CYB561A3-215ENST00000540317 RRS1Q15050 365 aaKnown RBP15.76■□□□□ 0.11
CYB561A3-215ENST00000540317 CAMKK2Q96RR4 588 aa15.76■□□□□ 0.11
CYB561A3-215ENST00000540317 OVOS2A0A0G2JMS6 1433 aa15.75■□□□□ 0.11
CYB561A3-215ENST00000540317 PSDA5PKW4 1024 aaPredicted RBP15.75■□□□□ 0.11
CYB561A3-215ENST00000540317 SRCAPQ6ZRS2 3230 aa15.75■□□□□ 0.11
CYB561A3-215ENST00000540317 ABCC6O95255 1503 aa15.75■□□□□ 0.11
CYB561A3-215ENST00000540317 RGPD1P0DJD0 1748 aa15.75■□□□□ 0.11
CYB561A3-215ENST00000540317 IL2RBP14784 551 aa15.75■□□□□ 0.11
CYB561A3-215ENST00000540317 HOXC9P31274 260 aa15.75■□□□□ 0.11
CYB561A3-215ENST00000540317 USP54Q70EL1 1684 aa15.74■□□□□ 0.11
CYB561A3-215ENST00000540317 PARP4Q9UKK3 1724 aaKnown RBP15.74■□□□□ 0.11
CYB561A3-215ENST00000540317 RNF123Q5XPI4 1314 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms