RNA–Protein interactions for RNA: ENST00000540309.5

GPD2-213, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 1 (best) BASIC

Gene GPD2, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-213ENST00000540309 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.72□□□□□ -0.37
GPD2-213ENST00000540309 ABCA9Q8IUA7 1624 aa12.72□□□□□ -0.37
GPD2-213ENST00000540309 HMGN5P82970 282 aaKnown RBP12.72□□□□□ -0.37
GPD2-213ENST00000540309 PRIMPOLQ96LW4 560 aa12.72□□□□□ -0.37
GPD2-213ENST00000540309 SLC12A5Q9H2X9 1139 aa12.72□□□□□ -0.37
GPD2-213ENST00000540309 ARHGEF28Q8N1W1 1705 aaKnown RBP12.72□□□□□ -0.37
GPD2-213ENST00000540309 UQCRHLA0A096LP55 91 aa12.71□□□□□ -0.37
GPD2-213ENST00000540309 CD2BP2O95400 341 aaKnown RBP12.71□□□□□ -0.37
GPD2-213ENST00000540309 UQCRHP07919 91 aa12.71□□□□□ -0.37
GPD2-213ENST00000540309 NCLP19338 710 aaKnown RBP12.71□□□□□ -0.37
GPD2-213ENST00000540309 OSCARQ8IYS5 282 aa12.71□□□□□ -0.37
GPD2-213ENST00000540309 R3HCC1Q9Y3T6 440 aaKnown RBP12.71□□□□□ -0.37
GPD2-213ENST00000540309 ZFYVE9O95405 1425 aa12.71□□□□□ -0.38
GPD2-213ENST00000540309 ST18O60284 1047 aa12.7□□□□□ -0.38
GPD2-213ENST00000540309 GTF2F1P35269 517 aaKnown RBP eCLIP12.7□□□□□ -0.38
GPD2-213ENST00000540309 MCM2P49736 904 aa12.7□□□□□ -0.38
GPD2-213ENST00000540309 UVSSAQ2YD98 709 aa12.7□□□□□ -0.38
GPD2-213ENST00000540309 FAM184AQ8NB25 1140 aa12.7□□□□□ -0.38
GPD2-213ENST00000540309 TSR2Q969E8 191 aaKnown RBP12.7□□□□□ -0.38
GPD2-213ENST00000540309 RBSNQ9H1K0 784 aa12.7□□□□□ -0.38
GPD2-213ENST00000540309 FRMPD1Q5SYB0 1578 aa12.69□□□□□ -0.38
GPD2-213ENST00000540309 FCHSD2O94868 740 aa12.69□□□□□ -0.38
GPD2-213ENST00000540309 ANKRD45Q5TZF3 282 aa12.69□□□□□ -0.38
GPD2-213ENST00000540309 CCDC94Q9BW85 323 aaPredicted RBP12.69□□□□□ -0.38
GPD2-213ENST00000540309 ABCC4O15439 1325 aa12.69□□□□□ -0.38
GPD2-213ENST00000540309 TULP4Q9NRJ4 1543 aa12.69□□□□□ -0.38
GPD2-213ENST00000540309 GLI2P10070 1586 aa12.69□□□□□ -0.38
GPD2-213ENST00000540309 INTS3Q68E01 1043 aaKnown RBP12.69□□□□□ -0.38
GPD2-213ENST00000540309 MCTP1Q6DN14 999 aa12.69□□□□□ -0.38
GPD2-213ENST00000540309 CAVIN1Q6NZI2 390 aaKnown RBP12.69□□□□□ -0.38
GPD2-213ENST00000540309 SYAP1Q96A49 352 aaPredicted RBP12.69□□□□□ -0.38
GPD2-213ENST00000540309 USP26Q9BXU7 913 aa12.69□□□□□ -0.38
GPD2-213ENST00000540309 CLTCQ00610 1675 aaKnown RBP12.68□□□□□ -0.38
GPD2-213ENST00000540309 PHF14O94880 888 aa12.68□□□□□ -0.38
GPD2-213ENST00000540309 PRIM1P49642 420 aaKnown RBP12.68□□□□□ -0.38
GPD2-213ENST00000540309 CASC1Q6TDU7 716 aa12.68□□□□□ -0.38
GPD2-213ENST00000540309 FAM13BQ9NYF5 915 aa12.68□□□□□ -0.38
GPD2-213ENST00000540309 RIMBP3CA6NJZ7 1639 aa12.68□□□□□ -0.38
GPD2-213ENST00000540309 RIMBP3BA6NNM3 1639 aa12.68□□□□□ -0.38
GPD2-213ENST00000540309 RIMBP3Q9UFD9 1639 aa12.68□□□□□ -0.38
GPD2-213ENST00000540309 AK9Q5TCS8 1911 aa12.67□□□□□ -0.38
GPD2-213ENST00000540309 MYRIPQ8NFW9 859 aa12.67□□□□□ -0.38
GPD2-213ENST00000540309 KIAA2012Q0VF49 1180 aa12.67□□□□□ -0.38
GPD2-213ENST00000540309 DCTPP1Q9H773 170 aa12.67□□□□□ -0.38
GPD2-213ENST00000540309 UGGT1Q9NYU2 1555 aa12.66□□□□□ -0.38
GPD2-213ENST00000540309 REC8O95072 547 aa12.66□□□□□ -0.38
GPD2-213ENST00000540309 GTPBP4Q9BZE4 634 aaKnown RBP12.66□□□□□ -0.38
GPD2-213ENST00000540309 API5Q9BZZ5 524 aaKnown RBP12.66□□□□□ -0.38
GPD2-213ENST00000540309 ATAD2Q6PL18 1390 aa12.65□□□□□ -0.38
GPD2-213ENST00000540309 EPB41L2O43491 1005 aaKnown RBP12.65□□□□□ -0.38
GPD2-213ENST00000540309 HAP1P54257 671 aaPredicted RBP12.65□□□□□ -0.38
GPD2-213ENST00000540309 TTC22Q5TAA0 569 aa12.65□□□□□ -0.38
GPD2-213ENST00000540309 MRPL50Q8N5N7 158 aaKnown RBP12.65□□□□□ -0.38
GPD2-213ENST00000540309 IL17RAQ96F46 866 aa12.65□□□□□ -0.38
GPD2-213ENST00000540309 PIK3C2BO00750 1634 aa12.65□□□□□ -0.38
GPD2-213ENST00000540309 FAM135BQ49AJ0 1406 aa12.65□□□□□ -0.38
GPD2-213ENST00000540309 DMTNQ08495 405 aa12.65□□□□□ -0.38
GPD2-213ENST00000540309 PLEKHM2Q8IWE5 1019 aa12.65□□□□□ -0.38
GPD2-213ENST00000540309 GPT2Q8TD30 523 aa12.65□□□□□ -0.38
GPD2-213ENST00000540309 INTS4Q96HW7 963 aaKnown RBP12.65□□□□□ -0.38
GPD2-213ENST00000540309 KIF20AO95235 890 aa12.64□□□□□ -0.39
GPD2-213ENST00000540309 TNNT2P45379 298 aaPredicted RBP12.64□□□□□ -0.39
GPD2-213ENST00000540309 XPCQ01831 940 aaPredicted RBP12.64□□□□□ -0.39
GPD2-213ENST00000540309 IFT57Q9NWB7 429 aa12.64□□□□□ -0.39
GPD2-213ENST00000540309 CHD1O14646 1710 aa12.64□□□□□ -0.39
GPD2-213ENST00000540309 VAMP4O75379 141 aa12.63□□□□□ -0.39
GPD2-213ENST00000540309 GNAI1P63096 354 aa12.63□□□□□ -0.39
GPD2-213ENST00000540309 RBM10P98175 930 aaKnown RBP12.63□□□□□ -0.39
GPD2-213ENST00000540309 RBM42Q9BTD8 480 aaKnown RBP12.63□□□□□ -0.39
GPD2-213ENST00000540309 KIF20BQ96Q89 1820 aa12.63□□□□□ -0.39
GPD2-213ENST00000540309 DIAPH1O60610 1272 aaKnown RBP12.63□□□□□ -0.39
GPD2-213ENST00000540309 LETM1O95202 739 aaPredicted RBP12.63□□□□□ -0.39
GPD2-213ENST00000540309 SIRT2Q8IXJ6 389 aa12.63□□□□□ -0.39
GPD2-213ENST00000540309 RPAP2Q8IXW5 612 aaPredicted RBP12.63□□□□□ -0.39
GPD2-213ENST00000540309 PIBF1Q8WXW3 757 aa12.63□□□□□ -0.39
GPD2-213ENST00000540309 KIF3BO15066 747 aa12.62□□□□□ -0.39
GPD2-213ENST00000540309 PRPF40AO75400 957 aaKnown RBP12.62□□□□□ -0.39
GPD2-213ENST00000540309 GSPT1P15170 499 aaKnown RBP12.62□□□□□ -0.39
GPD2-213ENST00000540309 TERF2IPQ9NYB0 399 aa12.62□□□□□ -0.39
GPD2-213ENST00000540309 TRAK1Q9UPV9 953 aa12.62□□□□□ -0.39
GPD2-213ENST00000540309 TPM3P06753 285 aa12.61□□□□□ -0.39
GPD2-213ENST00000540309 ZNF853P0CG23 659 aa12.61□□□□□ -0.39
GPD2-213ENST00000540309 ANAPC15P60006 121 aa12.61□□□□□ -0.39
GPD2-213ENST00000540309 AFAP1Q8N556 730 aa12.61□□□□□ -0.39
GPD2-213ENST00000540309 TSPY26PQ9H489 355 aa12.61□□□□□ -0.39
GPD2-213ENST00000540309 TMEM63CQ9P1W3 806 aa12.61□□□□□ -0.39
GPD2-213ENST00000540309 ABCC3O15438 1527 aa12.61□□□□□ -0.39
GPD2-213ENST00000540309 A0A1W2PP64 1363 aa12.61□□□□□ -0.39
GPD2-213ENST00000540309 HECW2Q9P2P5 1572 aa12.61□□□□□ -0.39
GPD2-213ENST00000540309 LRRC7Q96NW7 1537 aa12.61□□□□□ -0.39
GPD2-213ENST00000540309 BRD1O95696 1058 aa12.61□□□□□ -0.39
GPD2-213ENST00000540309 CUL4AQ13619 759 aa12.61□□□□□ -0.39
GPD2-213ENST00000540309 OSBPL3Q9H4L5 887 aa12.61□□□□□ -0.39
GPD2-213ENST00000540309 SPTLC3Q9NUV7 552 aa12.61□□□□□ -0.39
GPD2-213ENST00000540309 ZDHHC9Q9Y397 364 aa12.61□□□□□ -0.39
GPD2-213ENST00000540309 KIDINS220Q9ULH0 1771 aa12.6□□□□□ -0.39
GPD2-213ENST00000540309 CPSF1Q10570 1443 aaKnown RBP12.6□□□□□ -0.39
GPD2-213ENST00000540309 U2SURPO15042 1029 aaKnown RBP12.6□□□□□ -0.39
GPD2-213ENST00000540309 LMOD3Q0VAK6 560 aa12.6□□□□□ -0.39
GPD2-213ENST00000540309 FOXD4L1Q9NU39 408 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms