RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 IQGAP3Q86VI3 1631 aa10.92□□□□□ -0.66
DDB1-217ENST00000540166 BCL11BQ9C0K0 894 aaPredicted RBP10.91□□□□□ -0.66
DDB1-217ENST00000540166 MROH1Q8NDA8 1641 aa10.91□□□□□ -0.66
DDB1-217ENST00000540166 NEURL4Q96JN8 1562 aa10.91□□□□□ -0.66
DDB1-217ENST00000540166 PLEKHH1Q9ULM0 1364 aa10.91□□□□□ -0.66
DDB1-217ENST00000540166 SPATA31A3Q5VYP0 1347 aa10.91□□□□□ -0.66
DDB1-217ENST00000540166 VWDEQ8N2E2 1590 aa10.91□□□□□ -0.66
DDB1-217ENST00000540166 UNC13BO14795 1591 aa10.91□□□□□ -0.66
DDB1-217ENST00000540166 GOLGA6L22H0YM25 854 aa10.9□□□□□ -0.66
DDB1-217ENST00000540166 RBM10P98175 930 aaKnown RBP10.9□□□□□ -0.66
DDB1-217ENST00000540166 KIF1BO60333 1816 aa10.9□□□□□ -0.66
DDB1-217ENST00000540166 GCC2Q8IWJ2 1684 aa10.9□□□□□ -0.66
DDB1-217ENST00000540166 EXOC5O00471 708 aa10.9□□□□□ -0.67
DDB1-217ENST00000540166 XRCC6P12956 609 aaKnown RBP eCLIP10.9□□□□□ -0.67
DDB1-217ENST00000540166 APBA3O96018 575 aa10.89□□□□□ -0.67
DDB1-217ENST00000540166 MAP7D2Q96T17 732 aa10.89□□□□□ -0.67
DDB1-217ENST00000540166 PTPRUQ92729 1446 aa10.89□□□□□ -0.67
DDB1-217ENST00000540166 SOS2Q07890 1332 aaPredicted RBP10.89□□□□□ -0.67
DDB1-217ENST00000540166 KIAA1211Q6ZU35 1233 aa10.89□□□□□ -0.67
DDB1-217ENST00000540166 DIP2AQ14689 1571 aa10.89□□□□□ -0.67
DDB1-217ENST00000540166 TRAK2O60296 914 aa10.88□□□□□ -0.67
DDB1-217ENST00000540166 DDB1Q16531 1140 aa10.88□□□□□ -0.67
DDB1-217ENST00000540166 CCDC125Q86Z20 511 aa10.88□□□□□ -0.67
DDB1-217ENST00000540166 PNPLA6Q8IY17 1366 aa10.88□□□□□ -0.67
DDB1-217ENST00000540166 E9PCH4 1651 aa10.88□□□□□ -0.67
DDB1-217ENST00000540166 GOLGA2Q08379 1002 aa10.88□□□□□ -0.67
DDB1-217ENST00000540166 NEUROD2Q15784 382 aa10.88□□□□□ -0.67
DDB1-217ENST00000540166 HSCBQ8IWL3 235 aa10.88□□□□□ -0.67
DDB1-217ENST00000540166 RAPGEF4Q8WZA2 1011 aa10.88□□□□□ -0.67
DDB1-217ENST00000540166 MST1RQ04912 1400 aa10.87□□□□□ -0.67
DDB1-217ENST00000540166 DDX11L8A8MPP1 907 aa10.87□□□□□ -0.67
DDB1-217ENST00000540166 PANK2Q9BZ23 570 aa10.87□□□□□ -0.67
DDB1-217ENST00000540166 SPATA31E1Q6ZUB1 1445 aa10.87□□□□□ -0.67
DDB1-217ENST00000540166 DNTTIP2Q5QJE6 756 aaKnown RBP10.87□□□□□ -0.67
DDB1-217ENST00000540166 DDX54Q8TDD1 881 aaKnown RBP10.87□□□□□ -0.67
DDB1-217ENST00000540166 GCP02774 474 aa10.86□□□□□ -0.67
DDB1-217ENST00000540166 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.86□□□□□ -0.67
DDB1-217ENST00000540166 CCDC146Q8IYE0 955 aa10.86□□□□□ -0.67
DDB1-217ENST00000540166 GRPEL1Q9HAV7 217 aa10.86□□□□□ -0.67
DDB1-217ENST00000540166 ADAMTS8Q9UP79 889 aa10.86□□□□□ -0.67
DDB1-217ENST00000540166 PTCH1Q13635 1447 aa10.86□□□□□ -0.67
DDB1-217ENST00000540166 FAM196AQ6ZSG2 479 aa10.86□□□□□ -0.67
DDB1-217ENST00000540166 GBP4Q96PP9 640 aa10.85□□□□□ -0.67
DDB1-217ENST00000540166 CHMP5Q9NZZ3 219 aa10.85□□□□□ -0.67
DDB1-217ENST00000540166 MED1Q15648 1581 aaPredicted RBP10.85□□□□□ -0.67
DDB1-217ENST00000540166 TMEM131LA2VDJ0 1609 aa10.85□□□□□ -0.67
DDB1-217ENST00000540166 MCM4P33991 863 aa10.85□□□□□ -0.67
DDB1-217ENST00000540166 TCP11L2Q8N4U5 519 aa10.85□□□□□ -0.67
DDB1-217ENST00000540166 CDK11BP21127 795 aaKnown RBP10.85□□□□□ -0.67
DDB1-217ENST00000540166 FAM182BQ5T319 152 aa10.85□□□□□ -0.67
DDB1-217ENST00000540166 SPHKAPQ2M3C7 1700 aa10.85□□□□□ -0.67
DDB1-217ENST00000540166 MAPK8IP3Q9UPT6 1336 aa10.84□□□□□ -0.67
DDB1-217ENST00000540166 UPF1Q92900 1129 aaKnown RBP eCLIP10.84□□□□□ -0.67
DDB1-217ENST00000540166 ALKQ9UM73 1620 aa10.84□□□□□ -0.67
DDB1-217ENST00000540166 C20orf194Q5TEA3 1177 aa10.84□□□□□ -0.67
DDB1-217ENST00000540166 FAM83GA6ND36 823 aa10.83□□□□□ -0.68
DDB1-217ENST00000540166 TRIM37O94972 964 aa10.83□□□□□ -0.68
DDB1-217ENST00000540166 CALD1Q05682 793 aaKnown RBP10.83□□□□□ -0.68
DDB1-217ENST00000540166 VPS72Q15906 364 aa10.83□□□□□ -0.68
DDB1-217ENST00000540166 R3HCC1Q9Y3T6 440 aaKnown RBP10.83□□□□□ -0.68
DDB1-217ENST00000540166 CLTCL1P53675 1640 aa10.83□□□□□ -0.68
DDB1-217ENST00000540166 HSP90AB1P08238 724 aaKnown RBP10.83□□□□□ -0.68
DDB1-217ENST00000540166 PDE4CQ08493 712 aa10.83□□□□□ -0.68
DDB1-217ENST00000540166 PTMAP06454 111 aaKnown RBP10.83□□□□□ -0.68
DDB1-217ENST00000540166 C8orf34Q49A92 452 aa10.83□□□□□ -0.68
DDB1-217ENST00000540166 KAT6BQ8WYB5 2073 aa10.83□□□□□ -0.68
DDB1-217ENST00000540166 PHLPP1O60346 1717 aa10.82□□□□□ -0.68
DDB1-217ENST00000540166 SLC12A5Q9H2X9 1139 aa10.82□□□□□ -0.68
DDB1-217ENST00000540166 ISY1Q9ULR0 285 aaKnown RBP10.82□□□□□ -0.68
DDB1-217ENST00000540166 ROBO1Q9Y6N7 1651 aa10.82□□□□□ -0.68
DDB1-217ENST00000540166 NPHP1O15259 732 aa10.81□□□□□ -0.68
DDB1-217ENST00000540166 HMGB2P26583 209 aaKnown RBP10.81□□□□□ -0.68
DDB1-217ENST00000540166 MTERF4Q7Z6M4 381 aaKnown RBP10.81□□□□□ -0.68
DDB1-217ENST00000540166 PPIP5K1Q6PFW1 1433 aa10.81□□□□□ -0.68
DDB1-217ENST00000540166 PSDA5PKW4 1024 aaPredicted RBP10.81□□□□□ -0.68
DDB1-217ENST00000540166 DEFB132Q7Z7B7 95 aa10.81□□□□□ -0.68
DDB1-217ENST00000540166 FNBP4Q8N3X1 1017 aaPredicted RBP10.81□□□□□ -0.68
DDB1-217ENST00000540166 CDCA7Q9BWT1 371 aaPredicted RBP10.81□□□□□ -0.68
DDB1-217ENST00000540166 ASXL1Q8IXJ9 1541 aa10.81□□□□□ -0.68
DDB1-217ENST00000540166 TNS3Q68CZ2 1445 aa10.81□□□□□ -0.68
DDB1-217ENST00000540166 PTMSP20962 102 aa10.81□□□□□ -0.68
DDB1-217ENST00000540166 RGS17Q9UGC6 210 aaPredicted RBP10.81□□□□□ -0.68
DDB1-217ENST00000540166 KIAA0232Q92628 1395 aa10.8□□□□□ -0.68
DDB1-217ENST00000540166 APAF1O14727 1248 aa10.8□□□□□ -0.68
DDB1-217ENST00000540166 AMER1Q5JTC6 1135 aaPredicted RBP10.8□□□□□ -0.68
DDB1-217ENST00000540166 STK32BQ9NY57 414 aa10.8□□□□□ -0.68
DDB1-217ENST00000540166 MORC1Q86VD1 984 aa10.8□□□□□ -0.68
DDB1-217ENST00000540166 SBNO1A3KN83 1393 aa10.8□□□□□ -0.68
DDB1-217ENST00000540166 TATP17735 454 aaPredicted RBP10.79□□□□□ -0.68
DDB1-217ENST00000540166 MFAP1P55081 439 aaKnown RBP10.79□□□□□ -0.68
DDB1-217ENST00000540166 PIK3C2GO75747 1445 aa10.79□□□□□ -0.68
DDB1-217ENST00000540166 EN1Q05925 392 aaPredicted RBP10.79□□□□□ -0.68
DDB1-217ENST00000540166 SKOR2Q2VWA4 1001 aaPredicted RBP10.79□□□□□ -0.68
DDB1-217ENST00000540166 PLEKHG3A1L390 1219 aa10.79□□□□□ -0.68
DDB1-217ENST00000540166 GGNBP2Q9H3C7 697 aa10.79□□□□□ -0.68
DDB1-217ENST00000540166 NEXMIFQ5QGS0 1516 aa10.78□□□□□ -0.68
DDB1-217ENST00000540166 LARP1Q6PKG0 1096 aaKnown RBP10.78□□□□□ -0.68
DDB1-217ENST00000540166 TTC21BQ7Z4L5 1316 aa10.78□□□□□ -0.68
DDB1-217ENST00000540166 TTC21AQ8NDW8 1320 aa10.78□□□□□ -0.68
DDB1-217ENST00000540166 ZHX1Q9UKY1 873 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms