RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 PEAK1Q9H792 1746 aa9.11□□□□□ -0.95
CDH19-203ENST00000540086 TRPM3Q9HCF6 1732 aaPredicted RBP9.11□□□□□ -0.95
CDH19-203ENST00000540086 SPATA31A3Q5VYP0 1347 aa9.11□□□□□ -0.95
CDH19-203ENST00000540086 NFAT5O94916 1531 aa9.11□□□□□ -0.95
CDH19-203ENST00000540086 FCHSD2O94868 740 aa9.1□□□□□ -0.95
CDH19-203ENST00000540086 CABLES1Q8TDN4 633 aa9.1□□□□□ -0.95
CDH19-203ENST00000540086 IQSEC2Q5JU85 1478 aa9.1□□□□□ -0.95
CDH19-203ENST00000540086 ZNF521Q96K83 1311 aa9.1□□□□□ -0.95
CDH19-203ENST00000540086 MAPK8IP3Q9UPT6 1336 aa9.1□□□□□ -0.95
CDH19-203ENST00000540086 MARF1Q9Y4F3 1742 aaKnown RBP9.1□□□□□ -0.95
CDH19-203ENST00000540086 AEBP1Q8IUX7 1158 aa9.1□□□□□ -0.95
CDH19-203ENST00000540086 LTV1Q96GA3 475 aaPredicted RBP9.1□□□□□ -0.95
CDH19-203ENST00000540086 GTF3C3Q9Y5Q9 886 aa9.1□□□□□ -0.95
CDH19-203ENST00000540086 USP54Q70EL1 1684 aa9.1□□□□□ -0.95
CDH19-203ENST00000540086 SLIT3O75094 1523 aa9.09□□□□□ -0.95
CDH19-203ENST00000540086 SOS2Q07890 1332 aaPredicted RBP9.09□□□□□ -0.95
CDH19-203ENST00000540086 MAP2P11137 1827 aaKnown RBP9.09□□□□□ -0.95
CDH19-203ENST00000540086 ZC3H6P61129 1189 aaKnown RBP9.09□□□□□ -0.95
CDH19-203ENST00000540086 PDE3BQ13370 1112 aa9.09□□□□□ -0.95
CDH19-203ENST00000540086 SULT6B1Q6IMI4 303 aa9.09□□□□□ -0.95
CDH19-203ENST00000540086 ARHGEF25Q86VW2 580 aa9.09□□□□□ -0.95
CDH19-203ENST00000540086 RTL1A6NKG5 1358 aa9.09□□□□□ -0.95
CDH19-203ENST00000540086 ARHGEF10O15013 1369 aa9.09□□□□□ -0.95
CDH19-203ENST00000540086 KIF24Q5T7B8 1368 aa9.09□□□□□ -0.95
CDH19-203ENST00000540086 POTEHQ6S545 545 aa9.08□□□□□ -0.96
CDH19-203ENST00000540086 WWC1Q8IX03 1113 aa9.08□□□□□ -0.96
CDH19-203ENST00000540086 NGEFQ8N5V2 710 aa9.08□□□□□ -0.96
CDH19-203ENST00000540086 IP6K1Q92551 441 aa9.08□□□□□ -0.96
CDH19-203ENST00000540086 PHACTR3Q96KR7 559 aa9.08□□□□□ -0.96
CDH19-203ENST00000540086 PNNQ9H307 717 aaKnown RBP9.08□□□□□ -0.96
CDH19-203ENST00000540086 MED1Q15648 1581 aaPredicted RBP9.08□□□□□ -0.96
CDH19-203ENST00000540086 TMPOP42166 694 aaKnown RBP9.08□□□□□ -0.96
CDH19-203ENST00000540086 GOLGA2Q08379 1002 aa9.08□□□□□ -0.96
CDH19-203ENST00000540086 ALS2Q96Q42 1657 aa9.07□□□□□ -0.96
CDH19-203ENST00000540086 EYA1Q99502 592 aa9.07□□□□□ -0.96
CDH19-203ENST00000540086 SPINK5Q9NQ38 1064 aaPredicted RBP9.07□□□□□ -0.96
CDH19-203ENST00000540086 FOXD4L1Q9NU39 408 aa9.07□□□□□ -0.96
CDH19-203ENST00000540086 NEFMP07197 916 aa9.06□□□□□ -0.96
CDH19-203ENST00000540086 RNF39Q9H2S5 420 aa9.06□□□□□ -0.96
CDH19-203ENST00000540086 SUPT16HQ9Y5B9 1047 aaKnown RBP9.06□□□□□ -0.96
CDH19-203ENST00000540086 IGSF1Q8N6C5 1336 aa9.06□□□□□ -0.96
CDH19-203ENST00000540086 RIPK4P57078 832 aa9.06□□□□□ -0.96
CDH19-203ENST00000540086 USHBP1Q8N6Y0 703 aa9.06□□□□□ -0.96
CDH19-203ENST00000540086 AXIN2Q9Y2T1 843 aa9.06□□□□□ -0.96
CDH19-203ENST00000540086 PIP4K2BP78356 416 aa9.05□□□□□ -0.96
CDH19-203ENST00000540086 SLFN5Q08AF3 891 aa9.05□□□□□ -0.96
CDH19-203ENST00000540086 NFE2L2Q16236 605 aa9.05□□□□□ -0.96
CDH19-203ENST00000540086 CCDC27Q2M243 656 aa9.05□□□□□ -0.96
CDH19-203ENST00000540086 TRIM35Q9UPQ4 493 aa9.05□□□□□ -0.96
CDH19-203ENST00000540086 CHRNA2Q15822 529 aa9.04□□□□□ -0.96
CDH19-203ENST00000540086 DUSP27Q5VZP5 1158 aa9.04□□□□□ -0.96
CDH19-203ENST00000540086 ANKRD24Q8TF21 1146 aa9.04□□□□□ -0.96
CDH19-203ENST00000540086 LRRC59Q96AG4 307 aaKnown RBP9.04□□□□□ -0.96
CDH19-203ENST00000540086 KIAA0232Q92628 1395 aa9.04□□□□□ -0.96
CDH19-203ENST00000540086 E9PSI1 815 aa9.04□□□□□ -0.96
CDH19-203ENST00000540086 TOM1O60784 492 aa9.04□□□□□ -0.96
CDH19-203ENST00000540086 HAP1P54257 671 aaPredicted RBP9.04□□□□□ -0.96
CDH19-203ENST00000540086 NBPF6Q5VWK0 638 aa9.04□□□□□ -0.96
CDH19-203ENST00000540086 NBPF4Q96M43 638 aa9.04□□□□□ -0.96
CDH19-203ENST00000540086 KDRP35968 1356 aa9.03□□□□□ -0.96
CDH19-203ENST00000540086 UBAP1LF5GYI3 381 aa9.03□□□□□ -0.96
CDH19-203ENST00000540086 WDR63Q8IWG1 891 aa9.03□□□□□ -0.96
CDH19-203ENST00000540086 ROBO1Q9Y6N7 1651 aa9.03□□□□□ -0.96
CDH19-203ENST00000540086 TRMT2AQ8IZ69 625 aaKnown RBP9.03□□□□□ -0.96
CDH19-203ENST00000540086 CNKSR2Q8WXI2 1034 aa9.03□□□□□ -0.96
CDH19-203ENST00000540086 RGPD1P0DJD0 1748 aa9.02□□□□□ -0.96
CDH19-203ENST00000540086 CPDO75976 1380 aa9.02□□□□□ -0.97
CDH19-203ENST00000540086 NHSL1Q5SYE7 1610 aa9.02□□□□□ -0.97
CDH19-203ENST00000540086 ERBB3P21860 1342 aa9.02□□□□□ -0.97
CDH19-203ENST00000540086 THUMPD2Q9BTF0 503 aaKnown RBP9.02□□□□□ -0.97
CDH19-203ENST00000540086 PRDM11Q9NQV5 511 aa9.02□□□□□ -0.97
CDH19-203ENST00000540086 LTN1O94822 1766 aa9.01□□□□□ -0.97
CDH19-203ENST00000540086 FAM83GA6ND36 823 aa9.01□□□□□ -0.97
CDH19-203ENST00000540086 NEFLP07196 543 aa9.01□□□□□ -0.97
CDH19-203ENST00000540086 IRX6P78412 446 aaPredicted RBP9.01□□□□□ -0.97
CDH19-203ENST00000540086 MAPK8IP2Q13387 824 aaPredicted RBP9.01□□□□□ -0.97
CDH19-203ENST00000540086 MTHFSDQ2M296 383 aaKnown RBP9.01□□□□□ -0.97
CDH19-203ENST00000540086 RCAN3Q9UKA8 241 aa9.01□□□□□ -0.97
CDH19-203ENST00000540086 PHRF1Q9P1Y6 1649 aaKnown RBP9.01□□□□□ -0.97
CDH19-203ENST00000540086 AHDC1Q5TGY3 1603 aaPredicted RBP9.01□□□□□ -0.97
CDH19-203ENST00000540086 DCTN1Q14203 1278 aa9.01□□□□□ -0.97
CDH19-203ENST00000540086 FKBP8Q14318 412 aa9.01□□□□□ -0.97
CDH19-203ENST00000540086 CSB-PGBD3P0DP91 1061 aa9□□□□□ -0.97
CDH19-203ENST00000540086 LMOD3Q0VAK6 560 aa9□□□□□ -0.97
CDH19-203ENST00000540086 TSR2Q969E8 191 aaKnown RBP9□□□□□ -0.97
CDH19-203ENST00000540086 MYH16Q9H6N6 1097 aa9□□□□□ -0.97
CDH19-203ENST00000540086 NLRP2Q9NX02 1062 aa9□□□□□ -0.97
CDH19-203ENST00000540086 CERKQ8TCT0 537 aa8.99□□□□□ -0.97
CDH19-203ENST00000540086 CRYBG1Q9Y4K1 1723 aa8.99□□□□□ -0.97
CDH19-203ENST00000540086 IL16Q14005 1332 aa8.99□□□□□ -0.97
CDH19-203ENST00000540086 FANCIQ9NVI1 1328 aa8.99□□□□□ -0.97
CDH19-203ENST00000540086 MCM10Q7L590 875 aa8.99□□□□□ -0.97
CDH19-203ENST00000540086 GAS2L2Q8NHY3 880 aa8.99□□□□□ -0.97
CDH19-203ENST00000540086 LAS1LQ9Y4W2 734 aaKnown RBP8.99□□□□□ -0.97
CDH19-203ENST00000540086 RNF123Q5XPI4 1314 aa8.98□□□□□ -0.97
CDH19-203ENST00000540086 NCAPD2Q15021 1401 aa8.98□□□□□ -0.97
CDH19-203ENST00000540086 CALD1Q05682 793 aaKnown RBP8.97□□□□□ -0.97
CDH19-203ENST00000540086 RRP1P56182 461 aaKnown RBP8.97□□□□□ -0.97
CDH19-203ENST00000540086 RTF1Q92541 710 aaKnown RBP8.97□□□□□ -0.97
CDH19-203ENST00000540086 ABCC6O95255 1503 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms