RNA–Protein interactions for RNA: ENST00000539605.5

ANKLE2-207, Transcript of ankyrin repeat and LEM domain containing 2, humanhuman

TSL 1 (best)

Gene ANKLE2, Length 10,890 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKLE2-207ENST00000539605 SPA17Q15506 151 aa17.23■□□□□ 0.35
ANKLE2-207ENST00000539605 PLIN1O60240 522 aa17.23■□□□□ 0.35
ANKLE2-207ENST00000539605 SREK1Q8WXA9 508 aaKnown RBP17.23■□□□□ 0.35
ANKLE2-207ENST00000539605 HOOK3Q86VS8 718 aa17.23■□□□□ 0.35
ANKLE2-207ENST00000539605 TANGO6Q9C0B7 1094 aa17.23■□□□□ 0.35
ANKLE2-207ENST00000539605 NAP1L3Q99457 506 aaPredicted RBP17.22■□□□□ 0.35
ANKLE2-207ENST00000539605 NEMFO60524 1076 aa17.22■□□□□ 0.35
ANKLE2-207ENST00000539605 MCM5P33992 734 aa17.22■□□□□ 0.35
ANKLE2-207ENST00000539605 CCDC113Q9H0I3 377 aa17.22■□□□□ 0.35
ANKLE2-207ENST00000539605 FERP16591 822 aa17.21■□□□□ 0.35
ANKLE2-207ENST00000539605 MPHOSPH9Q99550 1183 aa17.21■□□□□ 0.35
ANKLE2-207ENST00000539605 CCDC18Q5T9S5 1454 aa17.21■□□□□ 0.35
ANKLE2-207ENST00000539605 UPF3BQ9BZI7 483 aaKnown RBP17.21■□□□□ 0.35
ANKLE2-207ENST00000539605 WASHC2AQ641Q2 1341 aa17.21■□□□□ 0.35
ANKLE2-207ENST00000539605 GOLGA6L9A6NEM1 432 aa17.21■□□□□ 0.35
ANKLE2-207ENST00000539605 TMCO5BA8MYB1 307 aa17.21■□□□□ 0.35
ANKLE2-207ENST00000539605 BCL2L13Q9BXK5 485 aa17.21■□□□□ 0.35
ANKLE2-207ENST00000539605 TBC1D2BQ9UPU7 963 aa17.21■□□□□ 0.35
ANKLE2-207ENST00000539605 NGDNQ8NEJ9 315 aaKnown RBP17.21■□□□□ 0.35
ANKLE2-207ENST00000539605 NOL3O60936 208 aaKnown RBP17.2■□□□□ 0.34
ANKLE2-207ENST00000539605 NSRP1Q9H0G5 558 aaKnown RBP17.2■□□□□ 0.34
ANKLE2-207ENST00000539605 BMP2KQ9NSY1 1161 aaPredicted RBP17.2■□□□□ 0.34
ANKLE2-207ENST00000539605 IL27Q8NEV9 243 aa17.2■□□□□ 0.34
ANKLE2-207ENST00000539605 SMARCC1Q92922 1105 aaPredicted RBP17.2■□□□□ 0.34
ANKLE2-207ENST00000539605 HMGB1P1B2RPK0 211 aaPredicted RBP17.19■□□□□ 0.34
ANKLE2-207ENST00000539605 CBX1P83916 185 aa17.19■□□□□ 0.34
ANKLE2-207ENST00000539605 COG3Q96JB2 828 aa17.19■□□□□ 0.34
ANKLE2-207ENST00000539605 GSTTP1A0A1W2PQM5 241 aa17.19■□□□□ 0.34
ANKLE2-207ENST00000539605 CCDC144AA2RUR9 1427 aa17.19■□□□□ 0.34
ANKLE2-207ENST00000539605 NUP62CLQ9H1M0 184 aa17.18■□□□□ 0.34
ANKLE2-207ENST00000539605 RRP7AQ9Y3A4 280 aaKnown RBP17.18■□□□□ 0.34
ANKLE2-207ENST00000539605 EVC2Q86UK5 1308 aa17.18■□□□□ 0.34
ANKLE2-207ENST00000539605 CEP112Q8N8E3 955 aa17.18■□□□□ 0.34
ANKLE2-207ENST00000539605 NEK4P51957 841 aa17.18■□□□□ 0.34
ANKLE2-207ENST00000539605 NOL7Q9UMY1 257 aaKnown RBP17.18■□□□□ 0.34
ANKLE2-207ENST00000539605 RBM25P49756 843 aaKnown RBP17.18■□□□□ 0.34
ANKLE2-207ENST00000539605 CEP83Q9Y592 693 aa17.17■□□□□ 0.34
ANKLE2-207ENST00000539605 EIF5P55010 431 aaKnown RBP17.17■□□□□ 0.34
ANKLE2-207ENST00000539605 WASHC4Q2M389 1173 aa17.17■□□□□ 0.34
ANKLE2-207ENST00000539605 NBPF1Q3BBV0 1214 aa17.17■□□□□ 0.34
ANKLE2-207ENST00000539605 UBE4AQ14139 1066 aa17.17■□□□□ 0.34
ANKLE2-207ENST00000539605 MAP3K11Q16584 847 aa17.17■□□□□ 0.34
ANKLE2-207ENST00000539605 FGFR1OPO95684 399 aaKnown RBP17.16■□□□□ 0.34
ANKLE2-207ENST00000539605 FKBP5Q13451 457 aaPredicted RBP17.16■□□□□ 0.34
ANKLE2-207ENST00000539605 MSL1Q68DK7 614 aa17.16■□□□□ 0.34
ANKLE2-207ENST00000539605 LNPKQ9C0E8 428 aa17.16■□□□□ 0.34
ANKLE2-207ENST00000539605 CEP131Q9UPN4 1083 aa17.16■□□□□ 0.34
ANKLE2-207ENST00000539605 CYP46A1Q9Y6A2 500 aa17.16■□□□□ 0.34
ANKLE2-207ENST00000539605 IKQ13123 557 aaPredicted RBP17.16■□□□□ 0.34
ANKLE2-207ENST00000539605 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.16■□□□□ 0.34
ANKLE2-207ENST00000539605 ALS2CR12Q96Q35 445 aa17.16■□□□□ 0.34
ANKLE2-207ENST00000539605 K7ELQ4 463 aaPredicted RBP17.16■□□□□ 0.34
ANKLE2-207ENST00000539605 CCDC6Q16204 474 aa17.16■□□□□ 0.34
ANKLE2-207ENST00000539605 GOPCQ9HD26 462 aa17.16■□□□□ 0.34
ANKLE2-207ENST00000539605 FSD2A1L4K1 749 aa17.16■□□□□ 0.34
ANKLE2-207ENST00000539605 PAXBP1Q9Y5B6 917 aa17.16■□□□□ 0.34
ANKLE2-207ENST00000539605 ZFYP08048 801 aaPredicted RBP17.15■□□□□ 0.34
ANKLE2-207ENST00000539605 EID1Q9Y6B2 187 aa17.15■□□□□ 0.34
ANKLE2-207ENST00000539605 PAFAH1B1P43034 410 aa17.15■□□□□ 0.34
ANKLE2-207ENST00000539605 CCDC57Q2TAC2 916 aa17.15■□□□□ 0.34
ANKLE2-207ENST00000539605 SPATA32Q96LK8 384 aa17.15■□□□□ 0.34
ANKLE2-207ENST00000539605 PLEKHH1Q9ULM0 1364 aa17.15■□□□□ 0.34
ANKLE2-207ENST00000539605 HMGB1P09429 215 aaKnown RBP17.15■□□□□ 0.34
ANKLE2-207ENST00000539605 GSDMDP57764 484 aa17.15■□□□□ 0.34
ANKLE2-207ENST00000539605 USP47Q96K76 1375 aa17.14■□□□□ 0.34
ANKLE2-207ENST00000539605 GNAI1P63096 354 aa17.14■□□□□ 0.34
ANKLE2-207ENST00000539605 FSD1Q9BTV5 496 aa17.14■□□□□ 0.34
ANKLE2-207ENST00000539605 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.14■□□□□ 0.332e-8■□□□□ 8.2
ANKLE2-207ENST00000539605 EHBP1Q8NDI1 1231 aa17.14■□□□□ 0.33
ANKLE2-207ENST00000539605 TDO2P48775 406 aa17.14■□□□□ 0.33
ANKLE2-207ENST00000539605 TUBB4BP68371 445 aa17.14■□□□□ 0.33
ANKLE2-207ENST00000539605 CFAP100Q494V2 611 aa17.14■□□□□ 0.33
ANKLE2-207ENST00000539605 STMN4Q9H169 189 aaPredicted RBP17.13■□□□□ 0.33
ANKLE2-207ENST00000539605 PRIMPOLQ96LW4 560 aa17.13■□□□□ 0.33
ANKLE2-207ENST00000539605 PAIP2Q9BPZ3 127 aaKnown RBP17.13■□□□□ 0.33
ANKLE2-207ENST00000539605 PRDM2Q13029 1718 aa17.13■□□□□ 0.33
ANKLE2-207ENST00000539605 USO1O60763 962 aaKnown RBP17.13■□□□□ 0.33
ANKLE2-207ENST00000539605 RSRC1Q96IZ7 334 aaKnown RBP17.13■□□□□ 0.33
ANKLE2-207ENST00000539605 PRDM10Q9NQV6 1147 aa17.13■□□□□ 0.33
ANKLE2-207ENST00000539605 RRBP1Q9P2E9 1410 aaKnown RBP17.13■□□□□ 0.33
ANKLE2-207ENST00000539605 RUNDC1Q96C34 613 aa17.13■□□□□ 0.33
ANKLE2-207ENST00000539605 UBTFL1P0CB47 393 aaPredicted RBP17.13■□□□□ 0.33
ANKLE2-207ENST00000539605 FBF1Q8TES7 1133 aa17.13■□□□□ 0.33
ANKLE2-207ENST00000539605 GTF2F1P35269 517 aaKnown RBP eCLIP17.13■□□□□ 0.33
ANKLE2-207ENST00000539605 WASF1Q92558 559 aa17.13■□□□□ 0.33
ANKLE2-207ENST00000539605 SPECC1Q5M775 1068 aa17.13■□□□□ 0.33
ANKLE2-207ENST00000539605 SOGA3Q5TF21 947 aa17.13■□□□□ 0.33
ANKLE2-207ENST00000539605 KRT222Q8N1A0 295 aa17.13■□□□□ 0.33
ANKLE2-207ENST00000539605 DNAJC21Q5F1R6 531 aaKnown RBP17.13■□□□□ 0.33
ANKLE2-207ENST00000539605 CCDC160A6NGH7 325 aa17.12■□□□□ 0.33
ANKLE2-207ENST00000539605 PPP4R3BQ5MIZ7 849 aa17.12■□□□□ 0.33
ANKLE2-207ENST00000539605 MIA2Q96PC5 1412 aa17.12■□□□□ 0.33
ANKLE2-207ENST00000539605 TNNT1P13805 278 aa17.12■□□□□ 0.33
ANKLE2-207ENST00000539605 FKBP15Q5T1M5 1219 aa17.12■□□□□ 0.33
ANKLE2-207ENST00000539605 PRKRIP1Q9H875 184 aaPredicted RBP17.11■□□□□ 0.33
ANKLE2-207ENST00000539605 LMAN1P49257 510 aa17.11■□□□□ 0.33
ANKLE2-207ENST00000539605 GCC1Q96CN9 775 aa17.11■□□□□ 0.33
ANKLE2-207ENST00000539605 CARMIL2Q6F5E8 1435 aa17.11■□□□□ 0.33
ANKLE2-207ENST00000539605 CCDC178Q5BJE1 867 aa17.11■□□□□ 0.33
ANKLE2-207ENST00000539605 TSNARE1Q96NA8 513 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms