RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 TNS3Q68CZ2 1445 aa11.69□□□□□ -0.54
DDB1-213ENST00000539332 TOM1O60784 492 aa11.69□□□□□ -0.54
DDB1-213ENST00000539332 LMOD2Q6P5Q4 547 aa11.69□□□□□ -0.54
DDB1-213ENST00000539332 PHRF1Q9P1Y6 1649 aaKnown RBP11.68□□□□□ -0.54
DDB1-213ENST00000539332 LTN1O94822 1766 aa11.68□□□□□ -0.54
DDB1-213ENST00000539332 SPATA31A3Q5VYP0 1347 aa11.68□□□□□ -0.54
DDB1-213ENST00000539332 ERICH6BQ5W0A0 696 aa11.68□□□□□ -0.54
DDB1-213ENST00000539332 CERKQ8TCT0 537 aa11.68□□□□□ -0.54
DDB1-213ENST00000539332 AHDC1Q5TGY3 1603 aaPredicted RBP11.68□□□□□ -0.54
DDB1-213ENST00000539332 SOX12O15370 315 aa11.67□□□□□ -0.54
DDB1-213ENST00000539332 RRS1Q15050 365 aaKnown RBP11.67□□□□□ -0.54
DDB1-213ENST00000539332 EMILIN1Q9Y6C2 1016 aa11.67□□□□□ -0.54
DDB1-213ENST00000539332 CRYBG1Q9Y4K1 1723 aa11.67□□□□□ -0.54
DDB1-213ENST00000539332 SLIT3O75094 1523 aa11.67□□□□□ -0.54
DDB1-213ENST00000539332 NFAT5O94916 1531 aa11.67□□□□□ -0.54
DDB1-213ENST00000539332 USP19O94966 1318 aa11.67□□□□□ -0.54
DDB1-213ENST00000539332 UBAP1LF5GYI3 381 aa11.67□□□□□ -0.54
DDB1-213ENST00000539332 PPM1GO15355 546 aaPredicted RBP11.67□□□□□ -0.54
DDB1-213ENST00000539332 MED1Q15648 1581 aaPredicted RBP11.66□□□□□ -0.54
DDB1-213ENST00000539332 ARHGEF10O15013 1369 aa11.66□□□□□ -0.54
DDB1-213ENST00000539332 RNF123Q5XPI4 1314 aa11.66□□□□□ -0.54
DDB1-213ENST00000539332 DLG5Q8TDM6 1919 aa11.65□□□□□ -0.54
DDB1-213ENST00000539332 KCNH5Q8NCM2 988 aa11.65□□□□□ -0.54
DDB1-213ENST00000539332 PHLPP1O60346 1717 aa11.65□□□□□ -0.54
DDB1-213ENST00000539332 MAP3K19Q56UN5 1328 aa11.65□□□□□ -0.54
DDB1-213ENST00000539332 GCP02774 474 aa11.64□□□□□ -0.55
DDB1-213ENST00000539332 PIP4K2BP78356 416 aa11.64□□□□□ -0.55
DDB1-213ENST00000539332 RUNDC1Q96C34 613 aa11.64□□□□□ -0.55
DDB1-213ENST00000539332 APAF1O14727 1248 aa11.64□□□□□ -0.55
DDB1-213ENST00000539332 PLEKHG5O94827 1062 aa11.64□□□□□ -0.55
DDB1-213ENST00000539332 CCDC146Q8IYE0 955 aa11.64□□□□□ -0.55
DDB1-213ENST00000539332 COL16A1Q07092 1604 aaPredicted RBP11.63□□□□□ -0.55
DDB1-213ENST00000539332 ABCA3Q99758 1704 aa11.63□□□□□ -0.55
DDB1-213ENST00000539332 KIF24Q5T7B8 1368 aa11.62□□□□□ -0.55
DDB1-213ENST00000539332 DIAPH1O60610 1272 aaKnown RBP11.62□□□□□ -0.55
DDB1-213ENST00000539332 CABLES1Q8TDN4 633 aa11.62□□□□□ -0.55
DDB1-213ENST00000539332 PLEKHF1Q96S99 279 aa11.62□□□□□ -0.55
DDB1-213ENST00000539332 FLT4P35916 1363 aa11.62□□□□□ -0.55
DDB1-213ENST00000539332 SENP3-EIF4A1A0A087X0R7 540 aa11.62□□□□□ -0.55
DDB1-213ENST00000539332 AMPHP49418 695 aa11.62□□□□□ -0.55
DDB1-213ENST00000539332 CCDC27Q2M243 656 aa11.62□□□□□ -0.55
DDB1-213ENST00000539332 TRMT2AQ8IZ69 625 aaKnown RBP11.62□□□□□ -0.55
DDB1-213ENST00000539332 LRRC59Q96AG4 307 aaKnown RBP11.62□□□□□ -0.55
DDB1-213ENST00000539332 HSP90AB2PQ58FF8 381 aa11.61□□□□□ -0.55
DDB1-213ENST00000539332 RGPD5Q99666 1765 aa11.6□□□□□ -0.55
DDB1-213ENST00000539332 RTL1A6NKG5 1358 aa11.6□□□□□ -0.55
DDB1-213ENST00000539332 U2AF1L5P0DN76 240 aaPredicted RBP11.6□□□□□ -0.55
DDB1-213ENST00000539332 IL13P35225 146 aa11.6□□□□□ -0.55
DDB1-213ENST00000539332 U2AF1Q01081 240 aaKnown RBP eCLIP11.6□□□□□ -0.551e-12■■■□□ 17.5
DDB1-213ENST00000539332 ARHGEF25Q86VW2 580 aa11.6□□□□□ -0.55
DDB1-213ENST00000539332 CDCA7LQ96GN5 454 aa11.6□□□□□ -0.55
DDB1-213ENST00000539332 COL22A1Q8NFW1 1626 aaPredicted RBP11.6□□□□□ -0.55
DDB1-213ENST00000539332 HOXC9P31274 260 aa11.59□□□□□ -0.55
DDB1-213ENST00000539332 GOLGA2Q08379 1002 aa11.59□□□□□ -0.55
DDB1-213ENST00000539332 DUSP27Q5VZP5 1158 aa11.59□□□□□ -0.55
DDB1-213ENST00000539332 TCP11L2Q8N4U5 519 aa11.59□□□□□ -0.55
DDB1-213ENST00000539332 SALL2Q9Y467 1007 aaPredicted RBP11.59□□□□□ -0.55
DDB1-213ENST00000539332 FCHSD2O94868 740 aa11.59□□□□□ -0.55
DDB1-213ENST00000539332 SLFN5Q08AF3 891 aa11.59□□□□□ -0.55
DDB1-213ENST00000539332 RSPH6AQ9H0K4 717 aa11.59□□□□□ -0.55
DDB1-213ENST00000539332 COL18A1P39060 1754 aa11.58□□□□□ -0.56
DDB1-213ENST00000539332 U2SURPO15042 1029 aaKnown RBP11.58□□□□□ -0.56
DDB1-213ENST00000539332 ZC3H6P61129 1189 aaKnown RBP11.58□□□□□ -0.56
DDB1-213ENST00000539332 EIF4A2Q14240 407 aaKnown RBP11.58□□□□□ -0.56
DDB1-213ENST00000539332 WWC1Q8IX03 1113 aa11.58□□□□□ -0.56
DDB1-213ENST00000539332 IP6K1Q92551 441 aa11.58□□□□□ -0.56
DDB1-213ENST00000539332 FBXO3Q9UK99 471 aa11.58□□□□□ -0.56
DDB1-213ENST00000539332 CPDO75976 1380 aa11.58□□□□□ -0.56
DDB1-213ENST00000539332 ZBTB7CA1YPR0 619 aa11.57□□□□□ -0.56
DDB1-213ENST00000539332 PNNQ9H307 717 aaKnown RBP11.57□□□□□ -0.56
DDB1-213ENST00000539332 CAMTA1Q9Y6Y1 1673 aa11.56□□□□□ -0.56
DDB1-213ENST00000539332 KIAA0232Q92628 1395 aa11.56□□□□□ -0.56
DDB1-213ENST00000539332 RGPD2P0DJD1 1756 aa11.56□□□□□ -0.56
DDB1-213ENST00000539332 ABCC6O95255 1503 aa11.56□□□□□ -0.56
DDB1-213ENST00000539332 E9PSI1 815 aa11.56□□□□□ -0.56
DDB1-213ENST00000539332 WDR63Q8IWG1 891 aa11.56□□□□□ -0.56
DDB1-213ENST00000539332 SPINK5Q9NQ38 1064 aaPredicted RBP11.55□□□□□ -0.56
DDB1-213ENST00000539332 RCAN3Q9UKA8 241 aa11.55□□□□□ -0.56
DDB1-213ENST00000539332 AXIN2Q9Y2T1 843 aa11.55□□□□□ -0.56
DDB1-213ENST00000539332 TMPOP42166 694 aaKnown RBP11.54□□□□□ -0.56
DDB1-213ENST00000539332 KDRP35968 1356 aa11.54□□□□□ -0.56
DDB1-213ENST00000539332 LMO7Q8WWI1 1683 aa11.54□□□□□ -0.56
DDB1-213ENST00000539332 MAPK8IP3Q9UPT6 1336 aa11.54□□□□□ -0.56
DDB1-213ENST00000539332 CHRNA2Q15822 529 aa11.54□□□□□ -0.56
DDB1-213ENST00000539332 LTV1Q96GA3 475 aaPredicted RBP11.54□□□□□ -0.56
DDB1-213ENST00000539332 PRDM11Q9NQV5 511 aa11.54□□□□□ -0.56
DDB1-213ENST00000539332 HMOX1P09601 288 aa11.53□□□□□ -0.56
DDB1-213ENST00000539332 EYA1Q99502 592 aa11.53□□□□□ -0.56
DDB1-213ENST00000539332 TRIM35Q9UPQ4 493 aa11.53□□□□□ -0.56
DDB1-213ENST00000539332 IL16Q14005 1332 aa11.52□□□□□ -0.56
DDB1-213ENST00000539332 IGSF1Q8N6C5 1336 aa11.52□□□□□ -0.56
DDB1-213ENST00000539332 PRKAR2BP31323 418 aa11.52□□□□□ -0.57
DDB1-213ENST00000539332 FAM208AQ9UK61 1670 aaKnown RBP11.52□□□□□ -0.57
DDB1-213ENST00000539332 ERBB3P21860 1342 aa11.52□□□□□ -0.57
DDB1-213ENST00000539332 MSH5O43196 834 aa11.51□□□□□ -0.57
DDB1-213ENST00000539332 RRP1P56182 461 aaKnown RBP11.51□□□□□ -0.57
DDB1-213ENST00000539332 SULT6B1Q6IMI4 303 aa11.51□□□□□ -0.57
DDB1-213ENST00000539332 AEBP1Q8IUX7 1158 aa11.51□□□□□ -0.57
DDB1-213ENST00000539332 ANKRD24Q8TF21 1146 aa11.51□□□□□ -0.57
DDB1-213ENST00000539332 RRP7AQ9Y3A4 280 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms