RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 REREQ9P2R6 1566 aa21.26■□□□□ 0.99
C2CD3-213ENST00000539061 C1orf115Q9H7X2 142 aa21.26■□□□□ 0.99
C2CD3-213ENST00000539061 CWC22Q9HCG8 908 aaKnown RBP21.25■□□□□ 0.99
C2CD3-213ENST00000539061 GGNBP2Q9H3C7 697 aa21.25■□□□□ 0.99
C2CD3-213ENST00000539061 CABP2Q9NPB3 220 aa21.25■□□□□ 0.99
C2CD3-213ENST00000539061 FAM13BQ9NYF5 915 aa21.25■□□□□ 0.99
C2CD3-213ENST00000539061 PIK3R4Q99570 1358 aa21.24■□□□□ 0.99
C2CD3-213ENST00000539061 SIRT2Q8IXJ6 389 aa21.24■□□□□ 0.99
C2CD3-213ENST00000539061 RPGRIP1LQ68CZ1 1315 aa21.23■□□□□ 0.99
C2CD3-213ENST00000539061 DIAPH1O60610 1272 aaKnown RBP21.23■□□□□ 0.99
C2CD3-213ENST00000539061 CSPP1Q1MSJ5 1256 aa21.23■□□□□ 0.99
C2CD3-213ENST00000539061 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.23■□□□□ 0.99
C2CD3-213ENST00000539061 TULP4Q9NRJ4 1543 aa21.23■□□□□ 0.99
C2CD3-213ENST00000539061 MCM5P33992 734 aa21.23■□□□□ 0.99
C2CD3-213ENST00000539061 PRIM1P49642 420 aaKnown RBP21.23■□□□□ 0.99
C2CD3-213ENST00000539061 MRPL50Q8N5N7 158 aaKnown RBP21.22■□□□□ 0.99
C2CD3-213ENST00000539061 ZKSCAN5Q9Y2L8 839 aa21.22■□□□□ 0.99
C2CD3-213ENST00000539061 XPCQ01831 940 aaPredicted RBP21.22■□□□□ 0.99
C2CD3-213ENST00000539061 PPRC1Q5VV67 1664 aaKnown RBP21.22■□□□□ 0.99
C2CD3-213ENST00000539061 GSPT1P15170 499 aaKnown RBP21.21■□□□□ 0.99
C2CD3-213ENST00000539061 A0A1W2PP64 1363 aa21.21■□□□□ 0.99
C2CD3-213ENST00000539061 UQCRHLA0A096LP55 91 aa21.21■□□□□ 0.99
C2CD3-213ENST00000539061 UQCRHP07919 91 aa21.21■□□□□ 0.99
C2CD3-213ENST00000539061 PTCH1Q13635 1447 aa21.21■□□□□ 0.99
C2CD3-213ENST00000539061 MTERF4Q7Z6M4 381 aaKnown RBP21.2■□□□□ 0.99
C2CD3-213ENST00000539061 LMTK2Q8IWU2 1503 aa21.2■□□□□ 0.98
C2CD3-213ENST00000539061 PPLO60437 1756 aa21.2■□□□□ 0.98
C2CD3-213ENST00000539061 VAMP4O75379 141 aa21.2■□□□□ 0.98
C2CD3-213ENST00000539061 PRPF40AO75400 957 aaKnown RBP21.2■□□□□ 0.98
C2CD3-213ENST00000539061 USP26Q9BXU7 913 aa21.2■□□□□ 0.98
C2CD3-213ENST00000539061 FCHSD2O94868 740 aa21.2■□□□□ 0.98
C2CD3-213ENST00000539061 PLEKHM2Q8IWE5 1019 aa21.2■□□□□ 0.98
C2CD3-213ENST00000539061 AK9Q5TCS8 1911 aa21.19■□□□□ 0.98
C2CD3-213ENST00000539061 PKP1Q13835 747 aa21.19■□□□□ 0.98
C2CD3-213ENST00000539061 DYNC1I1O14576 645 aa21.18■□□□□ 0.98
C2CD3-213ENST00000539061 ABCC4O15439 1325 aa21.18■□□□□ 0.98
C2CD3-213ENST00000539061 LRSAM1Q6UWE0 723 aa21.18■□□□□ 0.98
C2CD3-213ENST00000539061 GPT2Q8TD30 523 aa21.18■□□□□ 0.98
C2CD3-213ENST00000539061 CCDC39Q9UFE4 941 aa21.18■□□□□ 0.98
C2CD3-213ENST00000539061 FYB1O15117 783 aa21.17■□□□□ 0.98
C2CD3-213ENST00000539061 ST18O60284 1047 aa21.17■□□□□ 0.98
C2CD3-213ENST00000539061 TTC22Q5TAA0 569 aa21.17■□□□□ 0.98
C2CD3-213ENST00000539061 INTS3Q68E01 1043 aaKnown RBP21.17■□□□□ 0.98
C2CD3-213ENST00000539061 RBM27Q9P2N5 1060 aaKnown RBP21.16■□□□□ 0.98
C2CD3-213ENST00000539061 GLI2P10070 1586 aa21.16■□□□□ 0.98
C2CD3-213ENST00000539061 PNPLA6Q8IY17 1366 aa21.16■□□□□ 0.98
C2CD3-213ENST00000539061 SRPK2P78362 688 aaKnown RBP21.15■□□□□ 0.98
C2CD3-213ENST00000539061 TERF2IPQ9NYB0 399 aa21.15■□□□□ 0.98
C2CD3-213ENST00000539061 PRDM4Q9UKN5 801 aa21.14■□□□□ 0.98
C2CD3-213ENST00000539061 DCTPP1Q9H773 170 aa21.14■□□□□ 0.97
C2CD3-213ENST00000539061 SASS6Q6UVJ0 657 aa21.13■□□□□ 0.97
C2CD3-213ENST00000539061 PRKAR2BP31323 418 aa21.13■□□□□ 0.97
C2CD3-213ENST00000539061 FAM69CQ0P6D2 419 aa21.13■□□□□ 0.97
C2CD3-213ENST00000539061 SAFB2Q14151 953 aaKnown RBP eCLIP21.13■□□□□ 0.97
C2CD3-213ENST00000539061 CASC1Q6TDU7 716 aa21.13■□□□□ 0.97
C2CD3-213ENST00000539061 ZGPATQ8N5A5 531 aaKnown RBP21.13■□□□□ 0.97
C2CD3-213ENST00000539061 TSPYL6Q8N831 410 aa21.13■□□□□ 0.97
C2CD3-213ENST00000539061 API5Q9BZZ5 524 aaKnown RBP21.13■□□□□ 0.97
C2CD3-213ENST00000539061 TMEM63CQ9P1W3 806 aa21.13■□□□□ 0.97
C2CD3-213ENST00000539061 ZDHHC9Q9Y397 364 aa21.13■□□□□ 0.97
C2CD3-213ENST00000539061 ARHGEF28Q8N1W1 1705 aaKnown RBP21.12■□□□□ 0.97
C2CD3-213ENST00000539061 VGFO15240 615 aaPredicted RBP21.12■□□□□ 0.97
C2CD3-213ENST00000539061 GNAI1P63096 354 aa21.12■□□□□ 0.97
C2CD3-213ENST00000539061 NPATQ14207 1427 aa21.12■□□□□ 0.97
C2CD3-213ENST00000539061 SYCE3A1L190 88 aa21.12■□□□□ 0.97
C2CD3-213ENST00000539061 MBD3O95983 291 aa21.11■□□□□ 0.97
C2CD3-213ENST00000539061 NFE2L2Q16236 605 aa21.11■□□□□ 0.97
C2CD3-213ENST00000539061 IFT57Q9NWB7 429 aa21.11■□□□□ 0.97
C2CD3-213ENST00000539061 RAPGEF3O95398 923 aa21.1■□□□□ 0.97
C2CD3-213ENST00000539061 FAM135BQ49AJ0 1406 aa21.1■□□□□ 0.97
C2CD3-213ENST00000539061 KIF24Q5T7B8 1368 aa21.09■□□□□ 0.97
C2CD3-213ENST00000539061 ATAD2Q6PL18 1390 aa21.09■□□□□ 0.97
C2CD3-213ENST00000539061 ELL2O00472 640 aaPredicted RBP21.09■□□□□ 0.97
C2CD3-213ENST00000539061 LRRC7Q96NW7 1537 aa21.09■□□□□ 0.97
C2CD3-213ENST00000539061 SMAP1Q8IYB5 467 aaPredicted RBP21.09■□□□□ 0.97
C2CD3-213ENST00000539061 C16orf71Q8IYS4 520 aaPredicted RBP21.08■□□□□ 0.97
C2CD3-213ENST00000539061 ZFYVE9O95405 1425 aa21.08■□□□□ 0.97
C2CD3-213ENST00000539061 REC8O95072 547 aa21.08■□□□□ 0.96
C2CD3-213ENST00000539061 TWISTNBQ3B726 338 aaPredicted RBP21.08■□□□□ 0.96
C2CD3-213ENST00000539061 THUMPD2Q9BTF0 503 aaKnown RBP21.08■□□□□ 0.96
C2CD3-213ENST00000539061 NUTM2DQ5VT03 806 aaPredicted RBP21.07■□□□□ 0.96
C2CD3-213ENST00000539061 ANKRD26Q9UPS8 1709 aa21.07■□□□□ 0.96
C2CD3-213ENST00000539061 SDSP20132 328 aa21.07■□□□□ 0.96
C2CD3-213ENST00000539061 MBIPQ9NS73 344 aa21.07■□□□□ 0.96
C2CD3-213ENST00000539061 CDC42BPGQ6DT37 1551 aa21.06■□□□□ 0.96
C2CD3-213ENST00000539061 ZNF853P0CG23 659 aa21.06■□□□□ 0.96
C2CD3-213ENST00000539061 NSFL1CQ9UNZ2 370 aaKnown RBP21.06■□□□□ 0.96
C2CD3-213ENST00000539061 HDGFL2Q7Z4V5 671 aaPredicted RBP21.06■□□□□ 0.96
C2CD3-213ENST00000539061 PHACTR3Q96KR7 559 aa21.06■□□□□ 0.96
C2CD3-213ENST00000539061 PTMAP06454 111 aaKnown RBP21.05■□□□□ 0.96
C2CD3-213ENST00000539061 RNF214Q8ND24 703 aa21.05■□□□□ 0.96
C2CD3-213ENST00000539061 KIAA2012Q0VF49 1180 aa21.04■□□□□ 0.96
C2CD3-213ENST00000539061 ANKRD44Q8N8A2 993 aa21.04■□□□□ 0.96
C2CD3-213ENST00000539061 CFAP65Q6ZU64 1925 aaKnown RBP21.04■□□□□ 0.96
C2CD3-213ENST00000539061 STK26Q9P289 416 aa21.04■□□□□ 0.96
C2CD3-213ENST00000539061 CAMSAP1Q5T5Y3 1602 aa21.03■□□□□ 0.96
C2CD3-213ENST00000539061 TSPY26PQ9H489 355 aa21.03■□□□□ 0.96
C2CD3-213ENST00000539061 YEATS2Q9ULM3 1422 aa21.03■□□□□ 0.96
C2CD3-213ENST00000539061 CD163L1Q9NR16 1453 aa21.03■□□□□ 0.96
C2CD3-213ENST00000539061 RPAP2Q8IXW5 612 aaPredicted RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms