RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 PPP1R1BQ9UD71 204 aaPredicted RBP11.44□□□□□ -0.58
GGA3-202ENST00000538886 ADAMTS8Q9UP79 889 aa11.44□□□□□ -0.58
GGA3-202ENST00000538886 ZNF428Q96B54 188 aa11.44□□□□□ -0.58
GGA3-202ENST00000538886 CPS1P31327 1500 aa11.43□□□□□ -0.58
GGA3-202ENST00000538886 RIPK4P57078 832 aa11.43□□□□□ -0.58
GGA3-202ENST00000538886 DCTN1Q14203 1278 aa11.43□□□□□ -0.58
GGA3-202ENST00000538886 TCERG1O14776 1098 aaKnown RBP11.43□□□□□ -0.58
GGA3-202ENST00000538886 UNC5CLQ8IV45 518 aa11.43□□□□□ -0.58
GGA3-202ENST00000538886 PKNOX2Q96KN3 472 aa11.43□□□□□ -0.58
GGA3-202ENST00000538886 SOS2Q07890 1332 aaPredicted RBP11.43□□□□□ -0.58
GGA3-202ENST00000538886 EIF4A2Q14240 407 aaKnown RBP11.42□□□□□ -0.58
GGA3-202ENST00000538886 NBPF6Q5VWK0 638 aa11.42□□□□□ -0.58
GGA3-202ENST00000538886 TTC5Q8N0Z6 440 aa11.42□□□□□ -0.58
GGA3-202ENST00000538886 IP6K1Q92551 441 aa11.42□□□□□ -0.58
GGA3-202ENST00000538886 NBPF4Q96M43 638 aa11.42□□□□□ -0.58
GGA3-202ENST00000538886 USP6P35125 1406 aa11.42□□□□□ -0.58
GGA3-202ENST00000538886 EIF2S2P20042 333 aaKnown RBP11.42□□□□□ -0.58
GGA3-202ENST00000538886 SEPT12Q8IYM1 358 aa11.42□□□□□ -0.58
GGA3-202ENST00000538886 TCP11L2Q8N4U5 519 aa11.42□□□□□ -0.58
GGA3-202ENST00000538886 THUMPD2Q9BTF0 503 aaKnown RBP11.42□□□□□ -0.58
GGA3-202ENST00000538886 SPG7Q9UQ90 795 aa11.42□□□□□ -0.58
GGA3-202ENST00000538886 IL2RBP14784 551 aa11.42□□□□□ -0.58
GGA3-202ENST00000538886 EYA1Q99502 592 aa11.42□□□□□ -0.58
GGA3-202ENST00000538886 MIS18AQ9NYP9 233 aa11.42□□□□□ -0.58
GGA3-202ENST00000538886 ARHGEF25Q86VW2 580 aa11.41□□□□□ -0.58
GGA3-202ENST00000538886 NINLQ9Y2I6 1382 aa11.41□□□□□ -0.58
GGA3-202ENST00000538886 CABP4P57796 275 aa11.41□□□□□ -0.58
GGA3-202ENST00000538886 ZCRB1Q8TBF4 217 aaKnown RBP11.4□□□□□ -0.58
GGA3-202ENST00000538886 PUS7Q96PZ0 661 aaKnown RBP11.4□□□□□ -0.58
GGA3-202ENST00000538886 EDC4Q6P2E9 1401 aaKnown RBP11.4□□□□□ -0.58
GGA3-202ENST00000538886 NEURL4Q96JN8 1562 aa11.4□□□□□ -0.58
GGA3-202ENST00000538886 SETBP1Q9Y6X0 1596 aa11.4□□□□□ -0.59
GGA3-202ENST00000538886 MCM10Q7L590 875 aa11.4□□□□□ -0.59
GGA3-202ENST00000538886 BCL11BQ9C0K0 894 aaPredicted RBP11.4□□□□□ -0.59
GGA3-202ENST00000538886 PER1O15534 1290 aaPredicted RBP11.39□□□□□ -0.59
GGA3-202ENST00000538886 SPATA31A6Q5VVP1 1343 aa11.39□□□□□ -0.59
GGA3-202ENST00000538886 TRIM37O94972 964 aa11.39□□□□□ -0.59
GGA3-202ENST00000538886 GJD4Q96KN9 370 aaPredicted RBP11.39□□□□□ -0.59
GGA3-202ENST00000538886 TNS3Q68CZ2 1445 aa11.38□□□□□ -0.59
GGA3-202ENST00000538886 DIP2AQ14689 1571 aa11.38□□□□□ -0.59
GGA3-202ENST00000538886 ADGRB1O14514 1584 aa11.38□□□□□ -0.59
GGA3-202ENST00000538886 PPLO60437 1756 aa11.38□□□□□ -0.59
GGA3-202ENST00000538886 SBNO2Q9Y2G9 1366 aa11.37□□□□□ -0.59
GGA3-202ENST00000538886 KCNQ4P56696 695 aa11.37□□□□□ -0.59
GGA3-202ENST00000538886 RBM6P78332 1123 aaKnown RBP11.37□□□□□ -0.59
GGA3-202ENST00000538886 TECPR2O15040 1411 aa11.37□□□□□ -0.59
GGA3-202ENST00000538886 ANKARQ7Z5J8 1434 aa11.37□□□□□ -0.59
GGA3-202ENST00000538886 ASXL1Q8IXJ9 1541 aa11.37□□□□□ -0.59
GGA3-202ENST00000538886 FLT4P35916 1363 aa11.37□□□□□ -0.59
GGA3-202ENST00000538886 APBA3O96018 575 aa11.37□□□□□ -0.59
GGA3-202ENST00000538886 NRXN1Q9ULB1 1477 aa11.36□□□□□ -0.59
GGA3-202ENST00000538886 KRT27Q7Z3Y8 459 aa11.36□□□□□ -0.59
GGA3-202ENST00000538886 TMOD3Q9NYL9 352 aa11.36□□□□□ -0.59
GGA3-202ENST00000538886 FAM177BA6PVY3 158 aa11.36□□□□□ -0.59
GGA3-202ENST00000538886 PODXL2Q9NZ53 605 aa11.36□□□□□ -0.59
GGA3-202ENST00000538886 ATP7BP35670 1465 aa11.36□□□□□ -0.59
GGA3-202ENST00000538886 IL27Q8NEV9 243 aa11.36□□□□□ -0.59
GGA3-202ENST00000538886 FRAT1Q92837 279 aaPredicted RBP11.36□□□□□ -0.59
GGA3-202ENST00000538886 PNPLA6Q8IY17 1366 aa11.35□□□□□ -0.59
GGA3-202ENST00000538886 PRIM1P49642 420 aaKnown RBP11.35□□□□□ -0.59
GGA3-202ENST00000538886 TULP4Q9NRJ4 1543 aa11.35□□□□□ -0.59
GGA3-202ENST00000538886 SLC39A6Q13433 755 aa11.35□□□□□ -0.59
GGA3-202ENST00000538886 ERICH6BQ5W0A0 696 aa11.35□□□□□ -0.59
GGA3-202ENST00000538886 GAS2L2Q8NHY3 880 aa11.35□□□□□ -0.59
GGA3-202ENST00000538886 TSPYL4Q9UJ04 414 aa11.35□□□□□ -0.59
GGA3-202ENST00000538886 POTEAQ6S8J7 498 aa11.35□□□□□ -0.59
GGA3-202ENST00000538886 WWC3Q9ULE0 1092 aa11.35□□□□□ -0.59
GGA3-202ENST00000538886 NCOA3Q9Y6Q9 1424 aa11.34□□□□□ -0.59
GGA3-202ENST00000538886 IFNL2Q8IZJ0 200 aa11.34□□□□□ -0.59
GGA3-202ENST00000538886 BCL2L13Q9BXK5 485 aa11.34□□□□□ -0.59
GGA3-202ENST00000538886 PHF14O94880 888 aa11.33□□□□□ -0.59
GGA3-202ENST00000538886 AIMP1Q12904 312 aaKnown RBP11.33□□□□□ -0.59
GGA3-202ENST00000538886 STRCQ7RTU9 1775 aa11.33□□□□□ -0.59
GGA3-202ENST00000538886 TRPM1Q7Z4N2 1603 aa11.33□□□□□ -0.6
GGA3-202ENST00000538886 ERBB3P21860 1342 aa11.33□□□□□ -0.6
GGA3-202ENST00000538886 GTF2E1P29083 439 aaPredicted RBP11.33□□□□□ -0.6
GGA3-202ENST00000538886 RUNDC1Q96C34 613 aa11.33□□□□□ -0.6
GGA3-202ENST00000538886 PHACTR3Q96KR7 559 aa11.33□□□□□ -0.6
GGA3-202ENST00000538886 DCCP43146 1447 aa11.33□□□□□ -0.6
GGA3-202ENST00000538886 SBNO1A3KN83 1393 aa11.32□□□□□ -0.6
GGA3-202ENST00000538886 NFATC2IPQ8NCF5 419 aa11.32□□□□□ -0.6
GGA3-202ENST00000538886 WDR17Q8IZU2 1322 aa11.32□□□□□ -0.6
GGA3-202ENST00000538886 POLR1AO95602 1720 aaPredicted RBP11.32□□□□□ -0.6
GGA3-202ENST00000538886 GNAT3A8MTJ3 354 aa11.31□□□□□ -0.6
GGA3-202ENST00000538886 BTBD11A6QL63 1104 aa11.31□□□□□ -0.6
GGA3-202ENST00000538886 FCHSD2O94868 740 aa11.31□□□□□ -0.6
GGA3-202ENST00000538886 LMOD3Q0VAK6 560 aa11.31□□□□□ -0.6
GGA3-202ENST00000538886 MTHFSDQ2M296 383 aaKnown RBP11.31□□□□□ -0.6
GGA3-202ENST00000538886 POLR3AO14802 1390 aaPredicted RBP11.31□□□□□ -0.6
GGA3-202ENST00000538886 PIP4K2AP48426 406 aaPredicted RBP11.3□□□□□ -0.6
GGA3-202ENST00000538886 AMOTQ4VCS5 1084 aa11.3□□□□□ -0.6
GGA3-202ENST00000538886 CARD10Q9BWT7 1032 aa11.3□□□□□ -0.6
GGA3-202ENST00000538886 ZNF142P52746 1687 aaPredicted RBP11.3□□□□□ -0.6
GGA3-202ENST00000538886 IRX6P78412 446 aaPredicted RBP11.3□□□□□ -0.6
GGA3-202ENST00000538886 GLIPR1L2Q4G1C9 344 aa11.3□□□□□ -0.6
GGA3-202ENST00000538886 TSR2Q969E8 191 aaKnown RBP11.3□□□□□ -0.6
GGA3-202ENST00000538886 MYL6BP14649 208 aa11.29□□□□□ -0.6
GGA3-202ENST00000538886 BICDL1Q6ZP65 573 aa11.29□□□□□ -0.6
GGA3-202ENST00000538886 DLC1Q96QB1 1528 aa11.29□□□□□ -0.6
GGA3-202ENST00000538886 KCNQ2O43526 872 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms