RNA–Protein interactions for RNA: ENST00000538192.4

LRIT2-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 2, humanhuman

TSL 1 (best) BASIC

Gene LRIT2, Length 3,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2-202ENST00000538192 SULT6B1Q6IMI4 303 aa13.9□□□□□ -0.18
LRIT2-202ENST00000538192 ZMYM3Q14202 1370 aa13.9□□□□□ -0.18
LRIT2-202ENST00000538192 CT47B1P0C2W7 299 aaPredicted RBP13.9□□□□□ -0.18
LRIT2-202ENST00000538192 IL13P35225 146 aa13.89□□□□□ -0.19
LRIT2-202ENST00000538192 TWISTNBQ3B726 338 aaPredicted RBP13.89□□□□□ -0.19
LRIT2-202ENST00000538192 C8orf58Q8NAV2 365 aa13.89□□□□□ -0.19
LRIT2-202ENST00000538192 MCM10Q7L590 875 aa13.89□□□□□ -0.19
LRIT2-202ENST00000538192 ZBTB40Q9NUA8 1239 aa13.89□□□□□ -0.19
LRIT2-202ENST00000538192 MIS18AQ9NYP9 233 aa13.89□□□□□ -0.19
LRIT2-202ENST00000538192 LRRC7Q96NW7 1537 aa13.88□□□□□ -0.19
LRIT2-202ENST00000538192 NUTM2GQ5VZR2 741 aa13.88□□□□□ -0.19
LRIT2-202ENST00000538192 VAMP4O75379 141 aa13.88□□□□□ -0.19
LRIT2-202ENST00000538192 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.87□□□□□ -0.19
LRIT2-202ENST00000538192 TBC1D2Q9BYX2 928 aa13.87□□□□□ -0.19
LRIT2-202ENST00000538192 C22orf23Q9BZE7 217 aa13.87□□□□□ -0.19
LRIT2-202ENST00000538192 IL16Q14005 1332 aa13.87□□□□□ -0.19
LRIT2-202ENST00000538192 PRR36Q9H6K5 1346 aa13.87□□□□□ -0.19
LRIT2-202ENST00000538192 GNAI1P63096 354 aa13.87□□□□□ -0.19
LRIT2-202ENST00000538192 TBC1D32Q96NH3 1257 aa13.87□□□□□ -0.19
LRIT2-202ENST00000538192 PNPLA6Q8IY17 1366 aa13.87□□□□□ -0.19
LRIT2-202ENST00000538192 HSP90AB2PQ58FF8 381 aa13.87□□□□□ -0.19
LRIT2-202ENST00000538192 ADGRB2O60241 1585 aa13.86□□□□□ -0.19
LRIT2-202ENST00000538192 AEBP2Q6ZN18 517 aaPredicted RBP13.86□□□□□ -0.19
LRIT2-202ENST00000538192 HDGFP51858 240 aaKnown RBP13.85□□□□□ -0.19
LRIT2-202ENST00000538192 HDAC1Q13547 482 aaPredicted RBP13.85□□□□□ -0.19
LRIT2-202ENST00000538192 C14orf37Q86TY3 774 aa13.85□□□□□ -0.19
LRIT2-202ENST00000538192 ACEP12821 1306 aa13.85□□□□□ -0.19
LRIT2-202ENST00000538192 LTKP29376 864 aa13.85□□□□□ -0.19
LRIT2-202ENST00000538192 MRPL50Q8N5N7 158 aaKnown RBP13.85□□□□□ -0.19
LRIT2-202ENST00000538192 FOXD4L1Q9NU39 408 aa13.85□□□□□ -0.19
LRIT2-202ENST00000538192 BCL11BQ9C0K0 894 aaPredicted RBP13.84□□□□□ -0.19
LRIT2-202ENST00000538192 DIP2BQ9P265 1576 aa13.84□□□□□ -0.19
LRIT2-202ENST00000538192 RIMBP3CA6NJZ7 1639 aa13.84□□□□□ -0.19
LRIT2-202ENST00000538192 RIMBP3BA6NNM3 1639 aa13.84□□□□□ -0.19
LRIT2-202ENST00000538192 RIMBP3Q9UFD9 1639 aa13.84□□□□□ -0.19
LRIT2-202ENST00000538192 ALDH1L2Q3SY69 923 aa13.84□□□□□ -0.19
LRIT2-202ENST00000538192 MAP2P11137 1827 aaKnown RBP13.84□□□□□ -0.19
LRIT2-202ENST00000538192 FAM135BQ49AJ0 1406 aa13.84□□□□□ -0.19
LRIT2-202ENST00000538192 CALD1Q05682 793 aaKnown RBP13.83□□□□□ -0.19
LRIT2-202ENST00000538192 EIF4A2Q14240 407 aaKnown RBP13.83□□□□□ -0.19
LRIT2-202ENST00000538192 CHD1LQ86WJ1 897 aa13.83□□□□□ -0.19
LRIT2-202ENST00000538192 SMC5Q8IY18 1101 aa13.83□□□□□ -0.2
LRIT2-202ENST00000538192 RBM33Q96EV2 1170 aaKnown RBP13.83□□□□□ -0.2
LRIT2-202ENST00000538192 ROBO2Q9HCK4 1378 aa13.83□□□□□ -0.2
LRIT2-202ENST00000538192 ZBTB7CA1YPR0 619 aa13.83□□□□□ -0.2
LRIT2-202ENST00000538192 FOXO3O43524 673 aa13.83□□□□□ -0.2
LRIT2-202ENST00000538192 NGDNQ8NEJ9 315 aaKnown RBP13.83□□□□□ -0.2
LRIT2-202ENST00000538192 NECTIN2Q92692 538 aa13.83□□□□□ -0.2
LRIT2-202ENST00000538192 LTV1Q96GA3 475 aaPredicted RBP13.83□□□□□ -0.2
LRIT2-202ENST00000538192 GZF1Q9H116 711 aaPredicted RBP13.83□□□□□ -0.2
LRIT2-202ENST00000538192 IFT57Q9NWB7 429 aa13.83□□□□□ -0.2
LRIT2-202ENST00000538192 EDC4Q6P2E9 1401 aaKnown RBP13.83□□□□□ -0.2
LRIT2-202ENST00000538192 CPS1P31327 1500 aa13.82□□□□□ -0.2
LRIT2-202ENST00000538192 TNRQ92752 1358 aa13.82□□□□□ -0.2
LRIT2-202ENST00000538192 ZBTB7BO15156 539 aaPredicted RBP13.82□□□□□ -0.2
LRIT2-202ENST00000538192 PPP6R1Q9UPN7 881 aa13.82□□□□□ -0.2
LRIT2-202ENST00000538192 NCBP3Q53F19 620 aaKnown RBP13.81□□□□□ -0.2
LRIT2-202ENST00000538192 SLC4A10Q6U841 1118 aa13.81□□□□□ -0.2
LRIT2-202ENST00000538192 CFAP44Q96MT7 982 aa13.81□□□□□ -0.2
LRIT2-202ENST00000538192 MED14O60244 1454 aa13.81□□□□□ -0.2
LRIT2-202ENST00000538192 ATP7BP35670 1465 aa13.81□□□□□ -0.2
LRIT2-202ENST00000538192 TTC21BQ7Z4L5 1316 aa13.81□□□□□ -0.2
LRIT2-202ENST00000538192 NUCB1Q02818 461 aa13.81□□□□□ -0.2
LRIT2-202ENST00000538192 LMOD3Q0VAK6 560 aa13.8□□□□□ -0.2
LRIT2-202ENST00000538192 KIF20BQ96Q89 1820 aa13.79□□□□□ -0.2
LRIT2-202ENST00000538192 ZNF692Q9BU19 519 aaPredicted RBP13.79□□□□□ -0.2
LRIT2-202ENST00000538192 CPSF1Q10570 1443 aaKnown RBP13.79□□□□□ -0.2
LRIT2-202ENST00000538192 AMPHP49418 695 aa13.79□□□□□ -0.2
LRIT2-202ENST00000538192 SIRT2Q8IXJ6 389 aa13.79□□□□□ -0.2
LRIT2-202ENST00000538192 AMOTL2Q9Y2J4 779 aa13.79□□□□□ -0.2
LRIT2-202ENST00000538192 HSCBQ8IWL3 235 aa13.78□□□□□ -0.2
LRIT2-202ENST00000538192 EID1Q9Y6B2 187 aa13.78□□□□□ -0.2
LRIT2-202ENST00000538192 C16orf71Q8IYS4 520 aaPredicted RBP13.77□□□□□ -0.2
LRIT2-202ENST00000538192 TMEM2Q9UHN6 1383 aa13.77□□□□□ -0.21
LRIT2-202ENST00000538192 F6X3S4 739 aa13.77□□□□□ -0.21
LRIT2-202ENST00000538192 ARID3AQ99856 593 aa13.77□□□□□ -0.21
LRIT2-202ENST00000538192 SMARCA5O60264 1052 aaPredicted RBP13.76□□□□□ -0.21
LRIT2-202ENST00000538192 ZNF853P0CG23 659 aa13.76□□□□□ -0.21
LRIT2-202ENST00000538192 RTF1Q92541 710 aaKnown RBP13.76□□□□□ -0.21
LRIT2-202ENST00000538192 API5Q9BZZ5 524 aaKnown RBP13.76□□□□□ -0.21
LRIT2-202ENST00000538192 SPATA31D1Q6ZQQ2 1576 aa13.76□□□□□ -0.21
LRIT2-202ENST00000538192 SLC4A2P04920 1241 aa13.76□□□□□ -0.21
LRIT2-202ENST00000538192 ANKRD26Q9UPS8 1709 aa13.76□□□□□ -0.21
LRIT2-202ENST00000538192 RBM42Q9BTD8 480 aaKnown RBP13.75□□□□□ -0.21
LRIT2-202ENST00000538192 NLRP6P59044 892 aa13.75□□□□□ -0.21
LRIT2-202ENST00000538192 HSP90AB1P08238 724 aaKnown RBP13.75□□□□□ -0.21
LRIT2-202ENST00000538192 TSPYL4Q9UJ04 414 aa13.75□□□□□ -0.21
LRIT2-202ENST00000538192 OTUD7AQ8TE49 926 aaPredicted RBP13.74□□□□□ -0.21
LRIT2-202ENST00000538192 ANTXR1Q9H6X2 564 aa13.74□□□□□ -0.21
LRIT2-202ENST00000538192 PDIA4P13667 645 aaKnown RBP13.74□□□□□ -0.21
LRIT2-202ENST00000538192 ZNF428Q96B54 188 aa13.74□□□□□ -0.21
LRIT2-202ENST00000538192 MAP3K19Q56UN5 1328 aa13.74□□□□□ -0.21
LRIT2-202ENST00000538192 CDK12Q9NYV4 1490 aaPredicted RBP13.74□□□□□ -0.21
LRIT2-202ENST00000538192 GCC1Q96CN9 775 aa13.73□□□□□ -0.21
LRIT2-202ENST00000538192 PANK2Q9BZ23 570 aa13.73□□□□□ -0.21
LRIT2-202ENST00000538192 AGLP35573 1532 aa13.73□□□□□ -0.21
LRIT2-202ENST00000538192 DLC1Q96QB1 1528 aa13.73□□□□□ -0.21
LRIT2-202ENST00000538192 MTHFSDQ2M296 383 aaKnown RBP13.73□□□□□ -0.21
LRIT2-202ENST00000538192 TBC1D9Q6ZT07 1266 aa13.73□□□□□ -0.21
LRIT2-202ENST00000538192 USHBP1Q8N6Y0 703 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms