RNA–Protein interactions for RNA: ENST00000537568.1

LMO3-216, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-216ENST00000537568 CDK13Q14004 1512 aaKnown RBP12.82□□□□□ -0.36
LMO3-216ENST00000537568 JCADQ9P266 1359 aa12.81□□□□□ -0.36
LMO3-216ENST00000537568 KIDINS220Q9ULH0 1771 aa12.81□□□□□ -0.36
LMO3-216ENST00000537568 DEPDC5O75140 1603 aa12.81□□□□□ -0.36
LMO3-216ENST00000537568 ROBO1Q9Y6N7 1651 aa12.81□□□□□ -0.36
LMO3-216ENST00000537568 ABCC1P33527 1531 aa12.81□□□□□ -0.36
LMO3-216ENST00000537568 FAM9AQ8IZU1 332 aaPredicted RBP12.8□□□□□ -0.36
LMO3-216ENST00000537568 IRX2Q9BZI1 471 aaPredicted RBP12.8□□□□□ -0.36
LMO3-216ENST00000537568 TLL1O43897 1013 aa12.79□□□□□ -0.36
LMO3-216ENST00000537568 MAP2K5Q13163 448 aa12.79□□□□□ -0.36
LMO3-216ENST00000537568 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.79□□□□□ -0.36
LMO3-216ENST00000537568 IQGAP1P46940 1657 aa12.79□□□□□ -0.36
LMO3-216ENST00000537568 DDX11L8A8MPP1 907 aa12.77□□□□□ -0.37
LMO3-216ENST00000537568 RSPH4AQ5TD94 716 aa12.77□□□□□ -0.37
LMO3-216ENST00000537568 RDH13Q8NBN7 331 aa12.77□□□□□ -0.37
LMO3-216ENST00000537568 KDM4CQ9H3R0 1056 aa12.77□□□□□ -0.37
LMO3-216ENST00000537568 MYO5CQ9NQX4 1742 aa12.76□□□□□ -0.37
LMO3-216ENST00000537568 FBXO31Q5XUX0 539 aaPredicted RBP12.76□□□□□ -0.37
LMO3-216ENST00000537568 LRP5O75197 1615 aa12.75□□□□□ -0.37
LMO3-216ENST00000537568 PRXQ9BXM0 1461 aa12.75□□□□□ -0.37
LMO3-216ENST00000537568 ITSN2Q9NZM3 1697 aa12.74□□□□□ -0.37
LMO3-216ENST00000537568 ARHGAP5Q13017 1502 aa12.74□□□□□ -0.37
LMO3-216ENST00000537568 TNRQ92752 1358 aa12.74□□□□□ -0.37
LMO3-216ENST00000537568 PUS10Q3MIT2 529 aaKnown RBP12.74□□□□□ -0.37
LMO3-216ENST00000537568 PRKD2Q9BZL6 878 aa12.74□□□□□ -0.37
LMO3-216ENST00000537568 ZC3H13Q5T200 1668 aaKnown RBP12.73□□□□□ -0.37
LMO3-216ENST00000537568 GGCXP38435 758 aa12.73□□□□□ -0.37
LMO3-216ENST00000537568 COL16A1Q07092 1604 aaPredicted RBP12.73□□□□□ -0.37
LMO3-216ENST00000537568 PLXNC1O60486 1568 aa12.73□□□□□ -0.37
LMO3-216ENST00000537568 IRF6O14896 467 aa12.72□□□□□ -0.37
LMO3-216ENST00000537568 TRIM66O15016 1216 aa12.72□□□□□ -0.37
LMO3-216ENST00000537568 PDE4DQ08499 809 aa12.72□□□□□ -0.37
LMO3-216ENST00000537568 KIF14Q15058 1648 aa12.72□□□□□ -0.37
LMO3-216ENST00000537568 SPATA31A6Q5VVP1 1343 aa12.71□□□□□ -0.37
LMO3-216ENST00000537568 NR1I2O75469 434 aa12.71□□□□□ -0.37
LMO3-216ENST00000537568 SULF1Q8IWU6 871 aa12.71□□□□□ -0.37
LMO3-216ENST00000537568 MAP3K1Q13233 1512 aa12.71□□□□□ -0.38
LMO3-216ENST00000537568 MEX3CQ5U5Q3 659 aaKnown RBP12.7□□□□□ -0.38
LMO3-216ENST00000537568 THEMISQ8N1K5 641 aaPredicted RBP12.7□□□□□ -0.38
LMO3-216ENST00000537568 TMUB1Q9BVT8 246 aa12.7□□□□□ -0.38
LMO3-216ENST00000537568 ZMYND15Q9H091 742 aa12.7□□□□□ -0.38
LMO3-216ENST00000537568 PHLPP1O60346 1717 aa12.7□□□□□ -0.38
LMO3-216ENST00000537568 MINK1Q8N4C8 1332 aaPredicted RBP12.69□□□□□ -0.38
LMO3-216ENST00000537568 KDM5DQ9BY66 1539 aa12.69□□□□□ -0.38
LMO3-216ENST00000537568 NUTM2BA6NNL0 878 aaPredicted RBP12.69□□□□□ -0.38
LMO3-216ENST00000537568 NUTM2EB1AL46 878 aaPredicted RBP12.69□□□□□ -0.38
LMO3-216ENST00000537568 FUT2Q10981 343 aa12.69□□□□□ -0.38
LMO3-216ENST00000537568 NUTM2DQ5VT03 806 aaPredicted RBP12.69□□□□□ -0.38
LMO3-216ENST00000537568 GGT6Q6P531 493 aa12.69□□□□□ -0.38
LMO3-216ENST00000537568 NUTM2AQ8IVF1 878 aaPredicted RBP12.69□□□□□ -0.38
LMO3-216ENST00000537568 SCUBE3Q8IX30 993 aa12.69□□□□□ -0.38
LMO3-216ENST00000537568 CCDC102AQ96A19 550 aa12.69□□□□□ -0.38
LMO3-216ENST00000537568 UGGT1Q9NYU2 1555 aa12.69□□□□□ -0.38
LMO3-216ENST00000537568 TMEM94Q12767 1356 aa12.69□□□□□ -0.38
LMO3-216ENST00000537568 CEP350Q5VT06 3117 aa12.68□□□□□ -0.38
LMO3-216ENST00000537568 GCGRP47871 477 aa12.68□□□□□ -0.38
LMO3-216ENST00000537568 AFF2P51816 1311 aa12.67□□□□□ -0.38
LMO3-216ENST00000537568 RNF223E7ERA6 249 aa12.67□□□□□ -0.38
LMO3-216ENST00000537568 S1PR4O95977 384 aa12.67□□□□□ -0.38
LMO3-216ENST00000537568 ADH1BP00325 375 aa12.67□□□□□ -0.38
LMO3-216ENST00000537568 YY1P25490 414 aa12.67□□□□□ -0.38
LMO3-216ENST00000537568 V9GY48 417 aaPredicted RBP12.67□□□□□ -0.38
LMO3-216ENST00000537568 FGD6Q6ZV73 1430 aa12.67□□□□□ -0.38
LMO3-216ENST00000537568 SAMD9LQ8IVG5 1584 aa12.67□□□□□ -0.38
LMO3-216ENST00000537568 ATAD2Q6PL18 1390 aa12.67□□□□□ -0.38
LMO3-216ENST00000537568 ATP7AQ04656 1500 aa12.66□□□□□ -0.38
LMO3-216ENST00000537568 FAM135AQ9P2D6 1515 aa12.66□□□□□ -0.38
LMO3-216ENST00000537568 MDM2Q00987 491 aaPredicted RBP12.65□□□□□ -0.38
LMO3-216ENST00000537568 MORN1Q5T089 497 aa12.65□□□□□ -0.38
LMO3-216ENST00000537568 RSPH6AQ9H0K4 717 aa12.65□□□□□ -0.38
LMO3-216ENST00000537568 CDC42BPBQ9Y5S2 1711 aa12.65□□□□□ -0.38
LMO3-216ENST00000537568 LRRC9Q6ZRR7 1453 aa12.65□□□□□ -0.38
LMO3-216ENST00000537568 MIA2Q96PC5 1412 aa12.64□□□□□ -0.39
LMO3-216ENST00000537568 UBTFP17480 764 aaKnown RBP12.64□□□□□ -0.39
LMO3-216ENST00000537568 ATP6V1AP38606 617 aa12.64□□□□□ -0.39
LMO3-216ENST00000537568 RBM6P78332 1123 aaKnown RBP12.64□□□□□ -0.39
LMO3-216ENST00000537568 PZPP20742 1482 aa12.64□□□□□ -0.39
LMO3-216ENST00000537568 NLRP1Q9C000 1473 aa12.64□□□□□ -0.39
LMO3-216ENST00000537568 PPEF1O14829 653 aaPredicted RBP12.63□□□□□ -0.39
LMO3-216ENST00000537568 A2MP01023 1474 aa12.63□□□□□ -0.39
LMO3-216ENST00000537568 CD46P15529 392 aa12.62□□□□□ -0.39
LMO3-216ENST00000537568 SPSB2Q99619 263 aa12.61□□□□□ -0.39
LMO3-216ENST00000537568 SLC6A16Q9GZN6 736 aa12.61□□□□□ -0.39
LMO3-216ENST00000537568 QTRT2Q9H974 415 aaKnown RBP12.61□□□□□ -0.39
LMO3-216ENST00000537568 SLAIN2Q9P270 581 aa12.61□□□□□ -0.39
LMO3-216ENST00000537568 SHPRHQ149N8 1683 aa12.61□□□□□ -0.39
LMO3-216ENST00000537568 LTKP29376 864 aa12.6□□□□□ -0.39
LMO3-216ENST00000537568 ANKLE1Q8NAG6 615 aa12.6□□□□□ -0.39
LMO3-216ENST00000537568 EMID1Q96A84 441 aaPredicted RBP12.6□□□□□ -0.39
LMO3-216ENST00000537568 SLC27A5Q9Y2P5 690 aa12.6□□□□□ -0.39
LMO3-216ENST00000537568 NHSL1Q5SYE7 1610 aa12.59□□□□□ -0.39
LMO3-216ENST00000537568 FAM117AQ9C073 453 aa12.59□□□□□ -0.39
LMO3-216ENST00000537568 PODXL2Q9NZ53 605 aa12.59□□□□□ -0.39
LMO3-216ENST00000537568 GFRA3O60609 400 aa12.58□□□□□ -0.4
LMO3-216ENST00000537568 THAP11Q96EK4 314 aa12.58□□□□□ -0.4
LMO3-216ENST00000537568 UTRNP46939 3433 aa12.58□□□□□ -0.4
LMO3-216ENST00000537568 SPAG9O60271 1321 aaKnown RBP12.58□□□□□ -0.4
LMO3-216ENST00000537568 DIP2AQ14689 1571 aa12.57□□□□□ -0.4
LMO3-216ENST00000537568 TROQ12816 1431 aaPredicted RBP12.57□□□□□ -0.4
LMO3-216ENST00000537568 Q6ZNB5 142 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms