RNA–Protein interactions for RNA: ENST00000536313.2

MDM1-206, Transcript of Mdm1 nuclear protein, humanhuman

TSL 5

Gene MDM1, Length 883 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-206ENST00000536313 UPF1Q92900 1129 aaKnown RBP eCLIP6.85□□□□□ -1.31
MDM1-206ENST00000536313 TBC1D2BQ9UPU7 963 aa6.85□□□□□ -1.31
MDM1-206ENST00000536313 SUGT1Q9Y2Z0 365 aa6.85□□□□□ -1.31
MDM1-206ENST00000536313 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.85□□□□□ -1.31
MDM1-206ENST00000536313 NCOA1Q15788 1441 aa6.84□□□□□ -1.31
MDM1-206ENST00000536313 C9orf84Q5VXU9 1444 aa6.84□□□□□ -1.31
MDM1-206ENST00000536313 PREX1Q8TCU6 1659 aa6.84□□□□□ -1.31
MDM1-206ENST00000536313 GRXCR2A6NFK2 248 aa6.84□□□□□ -1.31
MDM1-206ENST00000536313 HSPA1LP34931 641 aa6.84□□□□□ -1.31
MDM1-206ENST00000536313 MMRN1Q13201 1228 aa6.84□□□□□ -1.31
MDM1-206ENST00000536313 GORABQ5T7V8 394 aa6.84□□□□□ -1.31
MDM1-206ENST00000536313 PSDA5PKW4 1024 aaPredicted RBP6.83□□□□□ -1.32
MDM1-206ENST00000536313 PALM3A6NDB9 673 aaPredicted RBP6.83□□□□□ -1.32
MDM1-206ENST00000536313 RAB11FIP3O75154 756 aa6.83□□□□□ -1.32
MDM1-206ENST00000536313 OSBPP22059 807 aa6.83□□□□□ -1.32
MDM1-206ENST00000536313 LMOD1P29536 600 aaPredicted RBP6.83□□□□□ -1.32
MDM1-206ENST00000536313 IRX6P78412 446 aaPredicted RBP6.83□□□□□ -1.32
MDM1-206ENST00000536313 CTTNBP2Q8WZ74 1663 aa6.83□□□□□ -1.32
MDM1-206ENST00000536313 RAPGEF6Q8TEU7 1601 aa6.83□□□□□ -1.32
MDM1-206ENST00000536313 FER1L4A9Z1Z3 1794 aa6.82□□□□□ -1.32
MDM1-206ENST00000536313 MDM2Q00987 491 aaPredicted RBP6.82□□□□□ -1.32
MDM1-206ENST00000536313 CCDC181Q5TID7 509 aa6.82□□□□□ -1.32
MDM1-206ENST00000536313 TEX2Q8IWB9 1127 aa6.82□□□□□ -1.32
MDM1-206ENST00000536313 AFAP1Q8N556 730 aa6.82□□□□□ -1.32
MDM1-206ENST00000536313 RBM46Q8TBY0 533 aaKnown RBP6.82□□□□□ -1.32
MDM1-206ENST00000536313 METTL14Q9HCE5 456 aaKnown RBP6.82□□□□□ -1.32
MDM1-206ENST00000536313 RBM27Q9P2N5 1060 aaKnown RBP6.82□□□□□ -1.32
MDM1-206ENST00000536313 PLCH2O75038 1416 aa6.82□□□□□ -1.32
MDM1-206ENST00000536313 TRAPPC8Q9Y2L5 1435 aa6.82□□□□□ -1.32
MDM1-206ENST00000536313 MED1Q15648 1581 aaPredicted RBP6.82□□□□□ -1.32
MDM1-206ENST00000536313 WASHC4Q2M389 1173 aa6.81□□□□□ -1.32
MDM1-206ENST00000536313 FBXO31Q5XUX0 539 aaPredicted RBP6.81□□□□□ -1.32
MDM1-206ENST00000536313 NPAS4Q8IUM7 802 aa6.81□□□□□ -1.32
MDM1-206ENST00000536313 TMA7Q9Y2S6 64 aaKnown RBP6.81□□□□□ -1.32
MDM1-206ENST00000536313 SAMD9Q5K651 1589 aa6.81□□□□□ -1.32
MDM1-206ENST00000536313 RECKO95980 971 aa6.8□□□□□ -1.32
MDM1-206ENST00000536313 PBX2P40425 430 aa6.8□□□□□ -1.32
MDM1-206ENST00000536313 MARSP56192 900 aaKnown RBP6.8□□□□□ -1.32
MDM1-206ENST00000536313 SETQ01105 290 aaPredicted RBP6.8□□□□□ -1.32
MDM1-206ENST00000536313 PTGDRQ13258 359 aa6.8□□□□□ -1.32
MDM1-206ENST00000536313 SLC52A1Q9NWF4 448 aa6.8□□□□□ -1.32
MDM1-206ENST00000536313 SBNO2Q9Y2G9 1366 aa6.8□□□□□ -1.32
MDM1-206ENST00000536313 SRCAPQ6ZRS2 3230 aa6.79□□□□□ -1.32
MDM1-206ENST00000536313 CFAP74Q9C0B2 1584 aa6.79□□□□□ -1.32
MDM1-206ENST00000536313 SOWAHDA6NJG2 315 aa6.79□□□□□ -1.32
MDM1-206ENST00000536313 ARID4AP29374 1257 aaPredicted RBP6.79□□□□□ -1.32
MDM1-206ENST00000536313 PIP4K2BP78356 416 aa6.79□□□□□ -1.32
MDM1-206ENST00000536313 DIXDC1Q155Q3 683 aa6.79□□□□□ -1.32
MDM1-206ENST00000536313 HSP90AB4PQ58FF6 505 aa6.79□□□□□ -1.32
MDM1-206ENST00000536313 PPP4R3BQ5MIZ7 849 aa6.79□□□□□ -1.32
MDM1-206ENST00000536313 POTEEQ6S8J3 1075 aa6.79□□□□□ -1.32
MDM1-206ENST00000536313 FAM217BQ9NTX9 383 aaPredicted RBP6.79□□□□□ -1.32
MDM1-206ENST00000536313 CUEDC1Q9NWM3 386 aaPredicted RBP6.79□□□□□ -1.32
MDM1-206ENST00000536313 TLDC2A0PJX2 215 aa6.78□□□□□ -1.32
MDM1-206ENST00000536313 EVI5O60447 810 aa6.78□□□□□ -1.32
MDM1-206ENST00000536313 MCCD1P59942 119 aaPredicted RBP6.78□□□□□ -1.32
MDM1-206ENST00000536313 MAP3K9P80192 1104 aa6.78□□□□□ -1.32
MDM1-206ENST00000536313 EFCAB2Q5VUJ9 269 aa6.78□□□□□ -1.32
MDM1-206ENST00000536313 PHLDB3Q6NSJ2 640 aa6.78□□□□□ -1.32
MDM1-206ENST00000536313 CDCA7Q9BWT1 371 aaPredicted RBP6.78□□□□□ -1.32
MDM1-206ENST00000536313 ANO8Q9HCE9 1232 aaPredicted RBP6.78□□□□□ -1.32
MDM1-206ENST00000536313 CAMSAP1Q5T5Y3 1602 aa6.78□□□□□ -1.32
MDM1-206ENST00000536313 ZNF518AQ6AHZ1 1483 aa6.78□□□□□ -1.32
MDM1-206ENST00000536313 ANKRD33BA6NCL7 494 aa6.77□□□□□ -1.33
MDM1-206ENST00000536313 MAFGO15525 162 aa6.77□□□□□ -1.33
MDM1-206ENST00000536313 ERCC5P28715 1186 aaPredicted RBP6.77□□□□□ -1.33
MDM1-206ENST00000536313 LSM11P83369 360 aaKnown RBP eCLIP6.77□□□□□ -1.33
MDM1-206ENST00000536313 ELOAQ14241 798 aaKnown RBP6.77□□□□□ -1.33
MDM1-206ENST00000536313 LARGE2Q8N3Y3 721 aa6.77□□□□□ -1.33
MDM1-206ENST00000536313 ALG2Q9H553 416 aa6.77□□□□□ -1.33
MDM1-206ENST00000536313 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.77□□□□□ -1.33
MDM1-206ENST00000536313 DIP2CQ9Y2E4 1556 aa6.77□□□□□ -1.33
MDM1-206ENST00000536313 CDK13Q14004 1512 aaKnown RBP6.76□□□□□ -1.33
MDM1-206ENST00000536313 TUSC1Q2TAM9 212 aa6.76□□□□□ -1.33
MDM1-206ENST00000536313 CDCA8Q53HL2 280 aa6.76□□□□□ -1.33
MDM1-206ENST00000536313 LNPKQ9C0E8 428 aa6.76□□□□□ -1.33
MDM1-206ENST00000536313 ESF1Q9H501 851 aaKnown RBP6.76□□□□□ -1.33
MDM1-206ENST00000536313 TFIP11Q9UBB9 837 aaKnown RBP6.76□□□□□ -1.33
MDM1-206ENST00000536313 MAGEC2Q9UBF1 373 aaPredicted RBP6.76□□□□□ -1.33
MDM1-206ENST00000536313 RGS17Q9UGC6 210 aaPredicted RBP6.76□□□□□ -1.33
MDM1-206ENST00000536313 AXIN2Q9Y2T1 843 aa6.76□□□□□ -1.33
MDM1-206ENST00000536313 NDUFB9Q9Y6M9 179 aa6.76□□□□□ -1.33
MDM1-206ENST00000536313 TCOF1Q13428 1488 aaKnown RBP6.76□□□□□ -1.33
MDM1-206ENST00000536313 KDM5CP41229 1560 aa6.76□□□□□ -1.33
MDM1-206ENST00000536313 ARHGAP33O14559 1287 aa6.75□□□□□ -1.33
MDM1-206ENST00000536313 FOSBP53539 338 aa6.75□□□□□ -1.33
MDM1-206ENST00000536313 IGBP1P78318 339 aa6.75□□□□□ -1.33
MDM1-206ENST00000536313 EGFLAMQ63HQ2 1017 aa6.75□□□□□ -1.33
MDM1-206ENST00000536313 ANKRD13DQ6ZTN6 518 aa6.75□□□□□ -1.33
MDM1-206ENST00000536313 ZNF454Q8N9F8 522 aa6.75□□□□□ -1.33
MDM1-206ENST00000536313 MORC4Q8TE76 937 aa6.75□□□□□ -1.33
MDM1-206ENST00000536313 GPATCH3Q96I76 525 aa6.75□□□□□ -1.33
MDM1-206ENST00000536313 BCL11AQ9H165 835 aa6.75□□□□□ -1.33
MDM1-206ENST00000536313 LIMD1Q9UGP4 676 aa6.75□□□□□ -1.33
MDM1-206ENST00000536313 AGLP35573 1532 aa6.75□□□□□ -1.33
MDM1-206ENST00000536313 NPATQ14207 1427 aa6.75□□□□□ -1.33
MDM1-206ENST00000536313 C3P01024 1663 aa6.74□□□□□ -1.33
MDM1-206ENST00000536313 REREQ9P2R6 1566 aa6.74□□□□□ -1.33
MDM1-206ENST00000536313 PLA2R1Q13018 1463 aa6.74□□□□□ -1.33
MDM1-206ENST00000536313 MLH3Q9UHC1 1453 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms