RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 ZCCHC11Q5TAX3 1644 aaKnown RBP8.58□□□□□ -1.04
CPSF7-215ENST00000536145 SPAG9O60271 1321 aaKnown RBP8.57□□□□□ -1.04
CPSF7-215ENST00000536145 U2AF1L5P0DN76 240 aaPredicted RBP8.57□□□□□ -1.04
CPSF7-215ENST00000536145 PRIM1P49642 420 aaKnown RBP8.57□□□□□ -1.04
CPSF7-215ENST00000536145 U2AF1Q01081 240 aaKnown RBP eCLIP8.57□□□□□ -1.04
CPSF7-215ENST00000536145 MRPL50Q8N5N7 158 aaKnown RBP8.57□□□□□ -1.04
CPSF7-215ENST00000536145 GPT2Q8TD30 523 aa8.57□□□□□ -1.04
CPSF7-215ENST00000536145 ARHGAP45Q92619 1136 aa8.57□□□□□ -1.04
CPSF7-215ENST00000536145 ZNF428Q96B54 188 aa8.57□□□□□ -1.04
CPSF7-215ENST00000536145 CWC22Q9HCG8 908 aaKnown RBP8.57□□□□□ -1.04
CPSF7-215ENST00000536145 FOXD4L1Q9NU39 408 aa8.57□□□□□ -1.04
CPSF7-215ENST00000536145 KIF24Q5T7B8 1368 aa8.57□□□□□ -1.04
CPSF7-215ENST00000536145 PNPLA6Q8IY17 1366 aa8.57□□□□□ -1.04
CPSF7-215ENST00000536145 KNDC1Q76NI1 1749 aa8.57□□□□□ -1.04
CPSF7-215ENST00000536145 ARHGEF28Q8N1W1 1705 aaKnown RBP8.57□□□□□ -1.04
CPSF7-215ENST00000536145 ABCC4O15439 1325 aa8.56□□□□□ -1.04
CPSF7-215ENST00000536145 ABCA9Q8IUA7 1624 aa8.56□□□□□ -1.04
CPSF7-215ENST00000536145 GSPT1P15170 499 aaKnown RBP8.56□□□□□ -1.04
CPSF7-215ENST00000536145 XPCQ01831 940 aaPredicted RBP8.56□□□□□ -1.04
CPSF7-215ENST00000536145 LRSAM1Q6UWE0 723 aa8.56□□□□□ -1.04
CPSF7-215ENST00000536145 ANP32BQ92688 251 aaKnown RBP8.56□□□□□ -1.04
CPSF7-215ENST00000536145 USP26Q9BXU7 913 aa8.56□□□□□ -1.04
CPSF7-215ENST00000536145 CCDC39Q9UFE4 941 aa8.56□□□□□ -1.04
CPSF7-215ENST00000536145 ERCC6L2Q5T890 1561 aa8.56□□□□□ -1.04
CPSF7-215ENST00000536145 MCTP1Q6DN14 999 aa8.55□□□□□ -1.04
CPSF7-215ENST00000536145 CAVIN1Q6NZI2 390 aaKnown RBP8.55□□□□□ -1.04
CPSF7-215ENST00000536145 PLEKHM2Q8IWE5 1019 aa8.55□□□□□ -1.04
CPSF7-215ENST00000536145 TMEM63CQ9P1W3 806 aa8.55□□□□□ -1.04
CPSF7-215ENST00000536145 GLI2P10070 1586 aa8.55□□□□□ -1.04
CPSF7-215ENST00000536145 FAM135BQ49AJ0 1406 aa8.54□□□□□ -1.04
CPSF7-215ENST00000536145 PIK3C2BO00750 1634 aa8.54□□□□□ -1.04
CPSF7-215ENST00000536145 VAMP4O75379 141 aa8.54□□□□□ -1.04
CPSF7-215ENST00000536145 GTF2F1P35269 517 aaKnown RBP eCLIP8.54□□□□□ -1.04
CPSF7-215ENST00000536145 TNNT2P45379 298 aaPredicted RBP8.54□□□□□ -1.04
CPSF7-215ENST00000536145 DMTNQ08495 405 aa8.54□□□□□ -1.04
CPSF7-215ENST00000536145 ANKRD45Q5TZF3 282 aa8.54□□□□□ -1.04
CPSF7-215ENST00000536145 MYRIPQ8NFW9 859 aa8.54□□□□□ -1.04
CPSF7-215ENST00000536145 CFAP44Q96MT7 982 aa8.54□□□□□ -1.04
CPSF7-215ENST00000536145 CHMP4BQ9H444 224 aaKnown RBP8.54□□□□□ -1.04
CPSF7-215ENST00000536145 RBM27Q9P2N5 1060 aaKnown RBP8.54□□□□□ -1.04
CPSF7-215ENST00000536145 RPGRIP1LQ68CZ1 1315 aa8.54□□□□□ -1.04
CPSF7-215ENST00000536145 CLTCQ00610 1675 aaKnown RBP8.53□□□□□ -1.04
CPSF7-215ENST00000536145 CD163L1Q9NR16 1453 aa8.53□□□□□ -1.04
CPSF7-215ENST00000536145 PKP1Q13835 747 aa8.53□□□□□ -1.04
CPSF7-215ENST00000536145 TTC22Q5TAA0 569 aa8.53□□□□□ -1.04
CPSF7-215ENST00000536145 ZNF710Q8N1W2 664 aa8.53□□□□□ -1.04
CPSF7-215ENST00000536145 IL17RAQ96F46 866 aa8.53□□□□□ -1.04
CPSF7-215ENST00000536145 CCDC94Q9BW85 323 aaPredicted RBP8.53□□□□□ -1.04
CPSF7-215ENST00000536145 FAM13BQ9NYF5 915 aa8.53□□□□□ -1.04
CPSF7-215ENST00000536145 NSFL1CQ9UNZ2 370 aaKnown RBP8.53□□□□□ -1.04
CPSF7-215ENST00000536145 ASXL2Q76L83 1435 aa8.53□□□□□ -1.04
CPSF7-215ENST00000536145 ZNF853P0CG23 659 aa8.52□□□□□ -1.05
CPSF7-215ENST00000536145 ZSCAN20P17040 1043 aaPredicted RBP8.52□□□□□ -1.05
CPSF7-215ENST00000536145 AFAP1Q8N556 730 aa8.52□□□□□ -1.05
CPSF7-215ENST00000536145 DCTPP1Q9H773 170 aa8.52□□□□□ -1.05
CPSF7-215ENST00000536145 TRAK1Q9UPV9 953 aa8.52□□□□□ -1.05
CPSF7-215ENST00000536145 LRRC7Q96NW7 1537 aa8.52□□□□□ -1.05
CPSF7-215ENST00000536145 ZFYVE9O95405 1425 aa8.52□□□□□ -1.05
CPSF7-215ENST00000536145 CAMSAP1Q5T5Y3 1602 aa8.51□□□□□ -1.05
CPSF7-215ENST00000536145 A0A1W2PP64 1363 aa8.51□□□□□ -1.05
CPSF7-215ENST00000536145 ABCC3O15438 1527 aa8.51□□□□□ -1.05
CPSF7-215ENST00000536145 PRPF40AO75400 957 aaKnown RBP8.51□□□□□ -1.05
CPSF7-215ENST00000536145 MBD3O95983 291 aa8.51□□□□□ -1.05
CPSF7-215ENST00000536145 CUL4AQ13619 759 aa8.51□□□□□ -1.05
CPSF7-215ENST00000536145 UVSSAQ2YD98 709 aa8.51□□□□□ -1.05
CPSF7-215ENST00000536145 ZGPATQ8N5A5 531 aaKnown RBP8.51□□□□□ -1.05
CPSF7-215ENST00000536145 PODXL2Q9NZ53 605 aa8.51□□□□□ -1.05
CPSF7-215ENST00000536145 ATP10DQ9P241 1426 aa8.51□□□□□ -1.05
CPSF7-215ENST00000536145 EVC2Q86UK5 1308 aa8.51□□□□□ -1.05
CPSF7-215ENST00000536145 NEXMIFQ5QGS0 1516 aa8.5□□□□□ -1.05
CPSF7-215ENST00000536145 BRD1O95696 1058 aa8.5□□□□□ -1.05
CPSF7-215ENST00000536145 HMGN5P82970 282 aaKnown RBP8.5□□□□□ -1.05
CPSF7-215ENST00000536145 PRIMPOLQ96LW4 560 aa8.5□□□□□ -1.05
CPSF7-215ENST00000536145 SPTLC3Q9NUV7 552 aa8.5□□□□□ -1.05
CPSF7-215ENST00000536145 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.5□□□□□ -1.05
CPSF7-215ENST00000536145 FRMPD1Q5SYB0 1578 aa8.49□□□□□ -1.05
CPSF7-215ENST00000536145 RGS12O14924 1447 aa8.49□□□□□ -1.05
CPSF7-215ENST00000536145 NPATQ14207 1427 aa8.49□□□□□ -1.05
CPSF7-215ENST00000536145 KIDINS220Q9ULH0 1771 aa8.49□□□□□ -1.05
CPSF7-215ENST00000536145 KIF3BO15066 747 aa8.49□□□□□ -1.05
CPSF7-215ENST00000536145 FCHSD2O94868 740 aa8.49□□□□□ -1.05
CPSF7-215ENST00000536145 KLHL34Q8N239 644 aa8.49□□□□□ -1.05
CPSF7-215ENST00000536145 ANKRD44Q8N8A2 993 aa8.49□□□□□ -1.05
CPSF7-215ENST00000536145 C1orf115Q9H7X2 142 aa8.49□□□□□ -1.05
CPSF7-215ENST00000536145 AK9Q5TCS8 1911 aa8.48□□□□□ -1.05
CPSF7-215ENST00000536145 HECW2Q9P2P5 1572 aa8.48□□□□□ -1.05
CPSF7-215ENST00000536145 CPSF1Q10570 1443 aaKnown RBP8.48□□□□□ -1.05
CPSF7-215ENST00000536145 TUBGCP6Q96RT7 1819 aa8.48□□□□□ -1.05
CPSF7-215ENST00000536145 SYCE3A1L190 88 aa8.48□□□□□ -1.05
CPSF7-215ENST00000536145 FYB1O15117 783 aa8.48□□□□□ -1.05
CPSF7-215ENST00000536145 NCLP19338 710 aaKnown RBP8.48□□□□□ -1.05
CPSF7-215ENST00000536145 INTS3Q68E01 1043 aaKnown RBP8.48□□□□□ -1.05
CPSF7-215ENST00000536145 TSPYL6Q8N831 410 aa8.48□□□□□ -1.05
CPSF7-215ENST00000536145 PIBF1Q8WXW3 757 aa8.48□□□□□ -1.05
CPSF7-215ENST00000536145 CHAMP1Q96JM3 812 aa8.48□□□□□ -1.05
CPSF7-215ENST00000536145 GTPBP4Q9BZE4 634 aaKnown RBP8.48□□□□□ -1.05
CPSF7-215ENST00000536145 API5Q9BZZ5 524 aaKnown RBP8.48□□□□□ -1.05
CPSF7-215ENST00000536145 TSPY26PQ9H489 355 aa8.48□□□□□ -1.05
CPSF7-215ENST00000536145 RTL1A6NKG5 1358 aa8.48□□□□□ -1.05
CPSF7-215ENST00000536145 KIF20BQ96Q89 1820 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms