RNA–Protein interactions for RNA: ENST00000536066.1

FOXM1-206, Transcript of forkhead box M1, humanhuman

TSL 1 (best)

Gene FOXM1, Length 2,518 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXM1-206ENST00000536066 LRRC7Q96NW7 1537 aa11.47□□□□□ -0.57
FOXM1-206ENST00000536066 TXNDC2Q86VQ3 553 aa11.46□□□□□ -0.57
FOXM1-206ENST00000536066 RRP7AQ9Y3A4 280 aaKnown RBP11.46□□□□□ -0.57
FOXM1-206ENST00000536066 AATKQ6ZMQ8 1374 aa11.46□□□□□ -0.58
FOXM1-206ENST00000536066 XRCC6P12956 609 aaKnown RBP eCLIP11.46□□□□□ -0.58
FOXM1-206ENST00000536066 CALD1Q05682 793 aaKnown RBP11.46□□□□□ -0.58
FOXM1-206ENST00000536066 C8orf34Q49A92 452 aa11.45□□□□□ -0.58
FOXM1-206ENST00000536066 PDCL3Q9H2J4 239 aa11.45□□□□□ -0.58
FOXM1-206ENST00000536066 PTCH1Q13635 1447 aa11.45□□□□□ -0.58
FOXM1-206ENST00000536066 PDE3AQ14432 1141 aa11.45□□□□□ -0.58
FOXM1-206ENST00000536066 NUDT16Q96DE0 195 aaKnown RBP11.45□□□□□ -0.58
FOXM1-206ENST00000536066 RIMS1Q86UR5 1692 aaKnown RBP11.45□□□□□ -0.58
FOXM1-206ENST00000536066 XRN1Q8IZH2 1706 aaKnown RBP11.44□□□□□ -0.58
FOXM1-206ENST00000536066 GOLGA6L3A6NEY3 463 aa11.44□□□□□ -0.58
FOXM1-206ENST00000536066 DIAPH1O60610 1272 aaKnown RBP11.44□□□□□ -0.58
FOXM1-206ENST00000536066 BCAR3O75815 825 aa11.44□□□□□ -0.58
FOXM1-206ENST00000536066 LTKP29376 864 aa11.44□□□□□ -0.58
FOXM1-206ENST00000536066 MYH16Q9H6N6 1097 aa11.44□□□□□ -0.58
FOXM1-206ENST00000536066 CCDC61Q9Y6R9 512 aa11.44□□□□□ -0.58
FOXM1-206ENST00000536066 U3KPZ7 1027 aaPredicted RBP11.44□□□□□ -0.58
FOXM1-206ENST00000536066 PTPRUQ92729 1446 aa11.44□□□□□ -0.58
FOXM1-206ENST00000536066 NALCNQ8IZF0 1738 aa11.44□□□□□ -0.58
FOXM1-206ENST00000536066 CENPQQ7L2Z9 268 aaPredicted RBP11.44□□□□□ -0.58
FOXM1-206ENST00000536066 IL16Q14005 1332 aa11.43□□□□□ -0.58
FOXM1-206ENST00000536066 PRR36Q9H6K5 1346 aa11.43□□□□□ -0.58
FOXM1-206ENST00000536066 NEUROD2Q15784 382 aa11.43□□□□□ -0.58
FOXM1-206ENST00000536066 PRDM4Q9UKN5 801 aa11.43□□□□□ -0.58
FOXM1-206ENST00000536066 CT47B1P0C2W7 299 aaPredicted RBP11.43□□□□□ -0.58
FOXM1-206ENST00000536066 BRD2P25440 801 aaKnown RBP11.43□□□□□ -0.58
FOXM1-206ENST00000536066 TMPOP42166 694 aaKnown RBP11.43□□□□□ -0.58
FOXM1-206ENST00000536066 POLKQ9UBT6 870 aa11.43□□□□□ -0.58
FOXM1-206ENST00000536066 U2SURPO15042 1029 aaKnown RBP11.42□□□□□ -0.58
FOXM1-206ENST00000536066 TPM2P07951 284 aa11.42□□□□□ -0.58
FOXM1-206ENST00000536066 RARSP54136 660 aaKnown RBP11.42□□□□□ -0.58
FOXM1-206ENST00000536066 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.42□□□□□ -0.58
FOXM1-206ENST00000536066 MAPK8IP3Q9UPT6 1336 aa11.42□□□□□ -0.58
FOXM1-206ENST00000536066 EID1Q9Y6B2 187 aa11.41□□□□□ -0.58
FOXM1-206ENST00000536066 FCHSD2O94868 740 aa11.41□□□□□ -0.58
FOXM1-206ENST00000536066 CEBPAP49715 358 aaPredicted RBP11.41□□□□□ -0.58
FOXM1-206ENST00000536066 ZNF692Q9BU19 519 aaPredicted RBP11.41□□□□□ -0.58
FOXM1-206ENST00000536066 PANK2Q9BZ23 570 aa11.41□□□□□ -0.58
FOXM1-206ENST00000536066 TRIM35Q9UPQ4 493 aa11.41□□□□□ -0.58
FOXM1-206ENST00000536066 CEP170BQ9Y4F5 1589 aaPredicted RBP11.4□□□□□ -0.58
FOXM1-206ENST00000536066 FSD2A1L4K1 749 aa11.4□□□□□ -0.58
FOXM1-206ENST00000536066 NME9Q86XW9 330 aa11.4□□□□□ -0.58
FOXM1-206ENST00000536066 TBX22Q9Y458 520 aa11.4□□□□□ -0.59
FOXM1-206ENST00000536066 ZNF142P52746 1687 aaPredicted RBP11.4□□□□□ -0.59
FOXM1-206ENST00000536066 OVOS2A0A0J9YW53 1432 aa11.39□□□□□ -0.59
FOXM1-206ENST00000536066 OVOS2Q6IE36 1432 aa11.39□□□□□ -0.59
FOXM1-206ENST00000536066 PLEKHG3A1L390 1219 aa11.39□□□□□ -0.59
FOXM1-206ENST00000536066 RGS3P49796 1198 aa11.39□□□□□ -0.59
FOXM1-206ENST00000536066 USP6P35125 1406 aa11.39□□□□□ -0.59
FOXM1-206ENST00000536066 ESPNB1AK53 854 aa11.38□□□□□ -0.59
FOXM1-206ENST00000536066 COG3Q96JB2 828 aa11.38□□□□□ -0.59
FOXM1-206ENST00000536066 NCKAP5LQ9HCH0 1330 aa11.38□□□□□ -0.59
FOXM1-206ENST00000536066 SSH2Q76I76 1423 aa11.38□□□□□ -0.59
FOXM1-206ENST00000536066 IL13P35225 146 aa11.37□□□□□ -0.59
FOXM1-206ENST00000536066 BECN1Q14457 450 aa11.37□□□□□ -0.59
FOXM1-206ENST00000536066 THEMISQ8N1K5 641 aaPredicted RBP11.37□□□□□ -0.59
FOXM1-206ENST00000536066 SLKQ9H2G2 1235 aaPredicted RBP11.37□□□□□ -0.59
FOXM1-206ENST00000536066 PIK3R4Q99570 1358 aa11.37□□□□□ -0.59
FOXM1-206ENST00000536066 DLG5Q8TDM6 1919 aa11.37□□□□□ -0.59
FOXM1-206ENST00000536066 CANXP27824 592 aaKnown RBP11.37□□□□□ -0.59
FOXM1-206ENST00000536066 EMILIN1Q9Y6C2 1016 aa11.37□□□□□ -0.59
FOXM1-206ENST00000536066 RGPD1P0DJD0 1748 aa11.36□□□□□ -0.59
FOXM1-206ENST00000536066 USP54Q70EL1 1684 aa11.36□□□□□ -0.59
FOXM1-206ENST00000536066 TTC21BQ7Z4L5 1316 aa11.36□□□□□ -0.59
FOXM1-206ENST00000536066 VIRMAQ69YN4 1812 aaKnown RBP11.36□□□□□ -0.59
FOXM1-206ENST00000536066 FMN2Q9NZ56 1722 aa11.36□□□□□ -0.59
FOXM1-206ENST00000536066 PRKAR2BP31323 418 aa11.36□□□□□ -0.59
FOXM1-206ENST00000536066 RIPK4P57078 832 aa11.36□□□□□ -0.59
FOXM1-206ENST00000536066 CLUAP1Q96AJ1 413 aa11.36□□□□□ -0.59
FOXM1-206ENST00000536066 ZRANB1Q9UGI0 708 aa11.36□□□□□ -0.59
FOXM1-206ENST00000536066 USP31Q70CQ4 1352 aa11.35□□□□□ -0.59
FOXM1-206ENST00000536066 PEAK1Q9H792 1746 aa11.35□□□□□ -0.59
FOXM1-206ENST00000536066 MRE11P49959 708 aa11.35□□□□□ -0.59
FOXM1-206ENST00000536066 POTEDQ86YR6 584 aa11.35□□□□□ -0.59
FOXM1-206ENST00000536066 PANK1Q8TE04 598 aa11.35□□□□□ -0.59
FOXM1-206ENST00000536066 SLC26A8Q96RN1 970 aa11.35□□□□□ -0.59
FOXM1-206ENST00000536066 RGPD8O14715 1765 aaPredicted RBP11.35□□□□□ -0.59
FOXM1-206ENST00000536066 ANKARQ7Z5J8 1434 aa11.35□□□□□ -0.59
FOXM1-206ENST00000536066 FBLN1P23142 703 aa11.35□□□□□ -0.59
FOXM1-206ENST00000536066 NFE2L2Q16236 605 aa11.35□□□□□ -0.59
FOXM1-206ENST00000536066 AMOTL2Q9Y2J4 779 aa11.35□□□□□ -0.59
FOXM1-206ENST00000536066 ACEP12821 1306 aa11.35□□□□□ -0.59
FOXM1-206ENST00000536066 ADAMTSL3P82987 1691 aa11.34□□□□□ -0.59
FOXM1-206ENST00000536066 TSR2Q969E8 191 aaKnown RBP11.34□□□□□ -0.59
FOXM1-206ENST00000536066 GZF1Q9H116 711 aaPredicted RBP11.34□□□□□ -0.59
FOXM1-206ENST00000536066 ERBB4Q15303 1308 aa11.34□□□□□ -0.59
FOXM1-206ENST00000536066 COG6Q9Y2V7 657 aa11.34□□□□□ -0.59
FOXM1-206ENST00000536066 CHD2O14647 1828 aaKnown RBP11.33□□□□□ -0.6
FOXM1-206ENST00000536066 EXOSC9Q06265 439 aaKnown RBP11.33□□□□□ -0.6
FOXM1-206ENST00000536066 PIK3C2AO00443 1686 aa11.33□□□□□ -0.6
FOXM1-206ENST00000536066 TTC21AQ8NDW8 1320 aa11.33□□□□□ -0.6
FOXM1-206ENST00000536066 RLBP1P12271 317 aa11.33□□□□□ -0.6
FOXM1-206ENST00000536066 ANTXR1Q9H6X2 564 aa11.33□□□□□ -0.6
FOXM1-206ENST00000536066 FBXO3Q9UK99 471 aa11.33□□□□□ -0.6
FOXM1-206ENST00000536066 ZKSCAN2Q63HK3 967 aa11.32□□□□□ -0.6
FOXM1-206ENST00000536066 USP19O94966 1318 aa11.32□□□□□ -0.6
FOXM1-206ENST00000536066 MARF1Q9Y4F3 1742 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms