RNA–Protein interactions for RNA: ENST00000535926.2

CHPF-203, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 2,634 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-203ENST00000535926 WASLO00401 505 aaPredicted RBP23.44■■□□□ 1.34
CHPF-203ENST00000535926 DDIT3P35638 169 aa23.44■■□□□ 1.34
CHPF-203ENST00000535926 GCC1Q96CN9 775 aa23.44■■□□□ 1.34
CHPF-203ENST00000535926 CPSF1Q10570 1443 aaKnown RBP23.43■■□□□ 1.34
CHPF-203ENST00000535926 A2ML1A8K2U0 1454 aa23.43■■□□□ 1.34
CHPF-203ENST00000535926 FAM83GA6ND36 823 aa23.43■■□□□ 1.34
CHPF-203ENST00000535926 CALD1Q05682 793 aaKnown RBP23.43■■□□□ 1.34
CHPF-203ENST00000535926 ARXQ96QS3 562 aa23.43■■□□□ 1.34
CHPF-203ENST00000535926 KIF2CQ99661 725 aa23.43■■□□□ 1.34
CHPF-203ENST00000535926 PTCH1Q13635 1447 aa23.43■■□□□ 1.34
CHPF-203ENST00000535926 RRS1Q15050 365 aaKnown RBP23.43■■□□□ 1.34
CHPF-203ENST00000535926 TWISTNBQ3B726 338 aaPredicted RBP23.43■■□□□ 1.34
CHPF-203ENST00000535926 L1TD1Q5T7N2 865 aaKnown RBP23.43■■□□□ 1.34
CHPF-203ENST00000535926 FAM43AQ8N2R8 423 aa23.43■■□□□ 1.34
CHPF-203ENST00000535926 SNX21Q969T3 373 aa23.42■■□□□ 1.34
CHPF-203ENST00000535926 ABCC4O15439 1325 aa23.42■■□□□ 1.34
CHPF-203ENST00000535926 DLC1Q96QB1 1528 aa23.42■■□□□ 1.34
CHPF-203ENST00000535926 MAP2P11137 1827 aaKnown RBP23.41■■□□□ 1.34
CHPF-203ENST00000535926 TRAK2O60296 914 aa23.41■■□□□ 1.34
CHPF-203ENST00000535926 RIMS2Q9UQ26 1411 aa23.41■■□□□ 1.34
CHPF-203ENST00000535926 XRCC6P12956 609 aaKnown RBP eCLIP23.41■■□□□ 1.34
CHPF-203ENST00000535926 DCTN1Q14203 1278 aa23.41■■□□□ 1.34
CHPF-203ENST00000535926 CFAP44Q96MT7 982 aa23.41■■□□□ 1.34
CHPF-203ENST00000535926 NCOA3Q9Y6Q9 1424 aa23.4■■□□□ 1.34
CHPF-203ENST00000535926 FSD2A1L4K1 749 aa23.4■■□□□ 1.34
CHPF-203ENST00000535926 TXNDC2Q86VQ3 553 aa23.4■■□□□ 1.34
CHPF-203ENST00000535926 EDC4Q6P2E9 1401 aaKnown RBP23.4■■□□□ 1.34
CHPF-203ENST00000535926 TBC1D9Q6ZT07 1266 aa23.38■■□□□ 1.33
CHPF-203ENST00000535926 NUDT16Q96DE0 195 aaKnown RBP23.38■■□□□ 1.33
CHPF-203ENST00000535926 CHMP4BQ9H444 224 aaKnown RBP23.38■■□□□ 1.33
CHPF-203ENST00000535926 METP08581 1390 aa23.38■■□□□ 1.33
CHPF-203ENST00000535926 GOLGA6L3A6NEY3 463 aa23.37■■□□□ 1.33
CHPF-203ENST00000535926 CD2BP2O95400 341 aaKnown RBP23.37■■□□□ 1.33
CHPF-203ENST00000535926 CYB5RLQ6IPT4 315 aa23.37■■□□□ 1.33
CHPF-203ENST00000535926 AATKQ6ZMQ8 1374 aa23.37■■□□□ 1.33
CHPF-203ENST00000535926 MLECQ14165 292 aa23.36■■□□□ 1.33
CHPF-203ENST00000535926 COG3Q96JB2 828 aa23.36■■□□□ 1.33
CHPF-203ENST00000535926 FAM69CQ0P6D2 419 aa23.36■■□□□ 1.33
CHPF-203ENST00000535926 CDK12Q9NYV4 1490 aaPredicted RBP23.36■■□□□ 1.33
CHPF-203ENST00000535926 CPS1P31327 1500 aa23.35■■□□□ 1.33
CHPF-203ENST00000535926 RBM42Q9BTD8 480 aaKnown RBP23.34■■□□□ 1.33
CHPF-203ENST00000535926 PANK2Q9BZ23 570 aa23.34■■□□□ 1.33
CHPF-203ENST00000535926 CCDC61Q9Y6R9 512 aa23.34■■□□□ 1.33
CHPF-203ENST00000535926 RIMBP3CA6NJZ7 1639 aa23.34■■□□□ 1.33
CHPF-203ENST00000535926 RIMBP3BA6NNM3 1639 aa23.34■■□□□ 1.33
CHPF-203ENST00000535926 RIMBP3Q9UFD9 1639 aa23.34■■□□□ 1.33
CHPF-203ENST00000535926 TNPO1Q92973 898 aaKnown RBP23.33■■□□□ 1.33
CHPF-203ENST00000535926 SETD1AO15047 1707 aaKnown RBP23.33■■□□□ 1.33
CHPF-203ENST00000535926 RRAGDQ9NQL2 400 aaPredicted RBP23.33■■□□□ 1.33
CHPF-203ENST00000535926 PPP6R1Q9UPN7 881 aa23.33■■□□□ 1.33
CHPF-203ENST00000535926 HSP90AB1P08238 724 aaKnown RBP23.32■■□□□ 1.32
CHPF-203ENST00000535926 LMOD3Q0VAK6 560 aa23.32■■□□□ 1.32
CHPF-203ENST00000535926 API5Q9BZZ5 524 aaKnown RBP23.32■■□□□ 1.32
CHPF-203ENST00000535926 KRT24Q2M2I5 525 aa23.31■■□□□ 1.32
CHPF-203ENST00000535926 AEBP1Q8IUX7 1158 aa23.31■■□□□ 1.32
CHPF-203ENST00000535926 GSPT1P15170 499 aaKnown RBP23.31■■□□□ 1.32
CHPF-203ENST00000535926 FOXD4L1Q9NU39 408 aa23.3■■□□□ 1.32
CHPF-203ENST00000535926 DDX11L8A8MPP1 907 aa23.29■■□□□ 1.32
CHPF-203ENST00000535926 PLEKHM2Q8IWE5 1019 aa23.29■■□□□ 1.32
CHPF-203ENST00000535926 SPATA31D1Q6ZQQ2 1576 aa23.29■■□□□ 1.32
CHPF-203ENST00000535926 PRR36Q9H6K5 1346 aa23.28■■□□□ 1.32
CHPF-203ENST00000535926 C16orf71Q8IYS4 520 aaPredicted RBP23.28■■□□□ 1.32
CHPF-203ENST00000535926 DCTPP1Q9H773 170 aa23.28■■□□□ 1.32
CHPF-203ENST00000535926 RAB3GAP1Q15042 981 aa23.28■■□□□ 1.32
CHPF-203ENST00000535926 CIZ1Q9ULV3 898 aaPredicted RBP23.27■■□□□ 1.32
CHPF-203ENST00000535926 NRXN3Q9Y4C0 1643 aa23.27■■□□□ 1.32
CHPF-203ENST00000535926 SULT6B1Q6IMI4 303 aa23.27■■□□□ 1.32
CHPF-203ENST00000535926 CDC45O75419 566 aa23.26■■□□□ 1.31
CHPF-203ENST00000535926 EIF4A2Q14240 407 aaKnown RBP23.26■■□□□ 1.31
CHPF-203ENST00000535926 DLG5Q8TDM6 1919 aa23.26■■□□□ 1.31
CHPF-203ENST00000535926 K7ELQ4 463 aaPredicted RBP23.26■■□□□ 1.31
CHPF-203ENST00000535926 INTS3Q68E01 1043 aaKnown RBP23.26■■□□□ 1.31
CHPF-203ENST00000535926 AGLP35573 1532 aa23.25■■□□□ 1.31
CHPF-203ENST00000535926 MCM10Q7L590 875 aa23.24■■□□□ 1.31
CHPF-203ENST00000535926 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.24■■□□□ 1.31
CHPF-203ENST00000535926 KNDC1Q76NI1 1749 aa23.23■■□□□ 1.31
CHPF-203ENST00000535926 GAS2L2Q8NHY3 880 aa23.23■■□□□ 1.31
CHPF-203ENST00000535926 KIF24Q5T7B8 1368 aa23.23■■□□□ 1.31
CHPF-203ENST00000535926 CHL1O00533 1208 aa23.23■■□□□ 1.31
CHPF-203ENST00000535926 HSP90AA1P07900 732 aaKnown RBP23.23■■□□□ 1.31
CHPF-203ENST00000535926 OTUD7AQ8TE49 926 aaPredicted RBP23.23■■□□□ 1.31
CHPF-203ENST00000535926 MRE11P49959 708 aa23.22■■□□□ 1.31
CHPF-203ENST00000535926 SIRT1Q96EB6 747 aa23.22■■□□□ 1.31
CHPF-203ENST00000535926 RGS12O14924 1447 aa23.22■■□□□ 1.31
CHPF-203ENST00000535926 ANKRD44Q8N8A2 993 aa23.21■■□□□ 1.31
CHPF-203ENST00000535926 TTC22Q5TAA0 569 aa23.2■■□□□ 1.3
CHPF-203ENST00000535926 REREQ9P2R6 1566 aa23.2■■□□□ 1.3
CHPF-203ENST00000535926 GBP4Q96PP9 640 aa23.2■■□□□ 1.3
CHPF-203ENST00000535926 GRPEL1Q9HAV7 217 aa23.2■■□□□ 1.3
CHPF-203ENST00000535926 HSP90AB2PQ58FF8 381 aa23.19■■□□□ 1.3
CHPF-203ENST00000535926 CEP85Q6P2H3 762 aa23.19■■□□□ 1.3
CHPF-203ENST00000535926 ATP10DQ9P241 1426 aa23.19■■□□□ 1.3
CHPF-203ENST00000535926 NUTM2FA1L443 756 aa23.19■■□□□ 1.3
CHPF-203ENST00000535926 GAS2L3Q86XJ1 694 aa23.19■■□□□ 1.3
CHPF-203ENST00000535926 TTC21BQ7Z4L5 1316 aa23.19■■□□□ 1.3
CHPF-203ENST00000535926 SSFA2P28290 1259 aa23.18■■□□□ 1.3
CHPF-203ENST00000535926 MON2Q7Z3U7 1717 aa23.18■■□□□ 1.3
CHPF-203ENST00000535926 TECPR2O15040 1411 aa23.18■■□□□ 1.3
CHPF-203ENST00000535926 SMARCA5O60264 1052 aaPredicted RBP23.17■■□□□ 1.3
CHPF-203ENST00000535926 ROBO2Q9HCK4 1378 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms