RNA–Protein interactions for RNA: ENST00000535544.1

LINC00943-203, long intergenic non-protein coding RNA 943, humanhuman

TSL 2 BASIC

Gene LINC00943, Length 2,815 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-203ENST00000535544 PCDHB15Q9Y5E8 787 aa11.86□□□□□ -0.51
LINC00943-203ENST00000535544 AATKQ6ZMQ8 1374 aa11.86□□□□□ -0.51
LINC00943-203ENST00000535544 RGS3P49796 1198 aa11.86□□□□□ -0.51
LINC00943-203ENST00000535544 ORAI2Q96SN7 254 aa11.86□□□□□ -0.51
LINC00943-203ENST00000535544 OVOS2A0A0J9YW53 1432 aa11.86□□□□□ -0.51
LINC00943-203ENST00000535544 OVOS2Q6IE36 1432 aa11.86□□□□□ -0.51
LINC00943-203ENST00000535544 DLG5Q8TDM6 1919 aa11.86□□□□□ -0.51
LINC00943-203ENST00000535544 MCM10Q7L590 875 aa11.85□□□□□ -0.51
LINC00943-203ENST00000535544 LTV1Q96GA3 475 aaPredicted RBP11.85□□□□□ -0.51
LINC00943-203ENST00000535544 MIS18AQ9NYP9 233 aa11.85□□□□□ -0.51
LINC00943-203ENST00000535544 NRKQ7Z2Y5 1582 aa11.85□□□□□ -0.51
LINC00943-203ENST00000535544 PTCH1Q13635 1447 aa11.85□□□□□ -0.51
LINC00943-203ENST00000535544 SMC4Q9NTJ3 1288 aa11.85□□□□□ -0.51
LINC00943-203ENST00000535544 NOB1Q9ULX3 412 aaKnown RBP11.85□□□□□ -0.51
LINC00943-203ENST00000535544 ADAMTSL3P82987 1691 aa11.85□□□□□ -0.51
LINC00943-203ENST00000535544 ABTB2Q8N961 1025 aa11.84□□□□□ -0.51
LINC00943-203ENST00000535544 XRN1Q8IZH2 1706 aaKnown RBP11.84□□□□□ -0.51
LINC00943-203ENST00000535544 ESCO1Q5FWF5 840 aa11.84□□□□□ -0.51
LINC00943-203ENST00000535544 TRIM27P14373 513 aa11.83□□□□□ -0.52
LINC00943-203ENST00000535544 PDE4AP27815 886 aa11.83□□□□□ -0.52
LINC00943-203ENST00000535544 HSPA2P54652 639 aa11.83□□□□□ -0.52
LINC00943-203ENST00000535544 NPM2Q86SE8 214 aaKnown RBP11.83□□□□□ -0.52
LINC00943-203ENST00000535544 MBIPQ9NS73 344 aa11.83□□□□□ -0.52
LINC00943-203ENST00000535544 CDK12Q9NYV4 1490 aaPredicted RBP11.83□□□□□ -0.52
LINC00943-203ENST00000535544 ZBTB7CA1YPR0 619 aa11.83□□□□□ -0.52
LINC00943-203ENST00000535544 PDE3AQ14432 1141 aa11.83□□□□□ -0.52
LINC00943-203ENST00000535544 C8orf58Q8NAV2 365 aa11.83□□□□□ -0.52
LINC00943-203ENST00000535544 DDX17Q92841 729 aaKnown RBP11.83□□□□□ -0.52
LINC00943-203ENST00000535544 USHBP1Q8N6Y0 703 aa11.82□□□□□ -0.52
LINC00943-203ENST00000535544 CHD2O14647 1828 aaKnown RBP11.82□□□□□ -0.52
LINC00943-203ENST00000535544 EYA1Q99502 592 aa11.82□□□□□ -0.52
LINC00943-203ENST00000535544 NALCNQ8IZF0 1738 aa11.81□□□□□ -0.52
LINC00943-203ENST00000535544 PIK3C2AO00443 1686 aa11.81□□□□□ -0.52
LINC00943-203ENST00000535544 AMPHP49418 695 aa11.81□□□□□ -0.52
LINC00943-203ENST00000535544 PHF8Q9UPP1 1060 aa11.81□□□□□ -0.52
LINC00943-203ENST00000535544 VAMP4O75379 141 aa11.8□□□□□ -0.52
LINC00943-203ENST00000535544 USP31Q70CQ4 1352 aa11.8□□□□□ -0.52
LINC00943-203ENST00000535544 NEFMP07197 916 aa11.8□□□□□ -0.52
LINC00943-203ENST00000535544 MTHFSDQ2M296 383 aaKnown RBP11.8□□□□□ -0.52
LINC00943-203ENST00000535544 CENPQQ7L2Z9 268 aaPredicted RBP11.8□□□□□ -0.52
LINC00943-203ENST00000535544 LMOD2Q6P5Q4 547 aa11.79□□□□□ -0.52
LINC00943-203ENST00000535544 TMEM57Q8N5G2 664 aa11.79□□□□□ -0.52
LINC00943-203ENST00000535544 BACH2Q9BYV9 841 aa11.79□□□□□ -0.52
LINC00943-203ENST00000535544 ZNF853P0CG23 659 aa11.79□□□□□ -0.52
LINC00943-203ENST00000535544 ZKSCAN2Q63HK3 967 aa11.79□□□□□ -0.52
LINC00943-203ENST00000535544 DZIP1LQ8IYY4 767 aaKnown RBP11.79□□□□□ -0.52
LINC00943-203ENST00000535544 PNNQ9H307 717 aaKnown RBP11.79□□□□□ -0.52
LINC00943-203ENST00000535544 PSME1Q06323 249 aa11.78□□□□□ -0.52
LINC00943-203ENST00000535544 NCBP3Q53F19 620 aaKnown RBP11.78□□□□□ -0.52
LINC00943-203ENST00000535544 FTSJ3Q8IY81 847 aaKnown RBP11.78□□□□□ -0.52
LINC00943-203ENST00000535544 IL16Q14005 1332 aa11.78□□□□□ -0.52
LINC00943-203ENST00000535544 NPHP4O75161 1426 aaPredicted RBP11.78□□□□□ -0.52
LINC00943-203ENST00000535544 MVPQ14764 893 aaKnown RBP11.78□□□□□ -0.52
LINC00943-203ENST00000535544 ITPRIPQ8IWB1 547 aa11.78□□□□□ -0.52
LINC00943-203ENST00000535544 TTC21AQ8NDW8 1320 aa11.77□□□□□ -0.52
LINC00943-203ENST00000535544 HOXC9P31274 260 aa11.77□□□□□ -0.53
LINC00943-203ENST00000535544 ATF7IPQ6VMQ6 1270 aa11.77□□□□□ -0.53
LINC00943-203ENST00000535544 FMN2Q9NZ56 1722 aa11.77□□□□□ -0.53
LINC00943-203ENST00000535544 MARF1Q9Y4F3 1742 aaKnown RBP11.77□□□□□ -0.53
LINC00943-203ENST00000535544 PROSER2Q86WR7 435 aaPredicted RBP11.77□□□□□ -0.53
LINC00943-203ENST00000535544 CFAP44Q96MT7 982 aa11.76□□□□□ -0.53
LINC00943-203ENST00000535544 C1orf115Q9H7X2 142 aa11.76□□□□□ -0.53
LINC00943-203ENST00000535544 LRRC59Q96AG4 307 aaKnown RBP11.76□□□□□ -0.53
LINC00943-203ENST00000535544 TWISTNBQ3B726 338 aaPredicted RBP11.75□□□□□ -0.53
LINC00943-203ENST00000535544 PIK3R4Q99570 1358 aa11.75□□□□□ -0.53
LINC00943-203ENST00000535544 GNAI1P63096 354 aa11.75□□□□□ -0.53
LINC00943-203ENST00000535544 MRPL50Q8N5N7 158 aaKnown RBP11.75□□□□□ -0.53
LINC00943-203ENST00000535544 IFT57Q9NWB7 429 aa11.75□□□□□ -0.53
LINC00943-203ENST00000535544 ZNF142P52746 1687 aaPredicted RBP11.74□□□□□ -0.53
LINC00943-203ENST00000535544 SBNO1A3KN83 1393 aa11.74□□□□□ -0.53
LINC00943-203ENST00000535544 FLT4P35916 1363 aa11.74□□□□□ -0.53
LINC00943-203ENST00000535544 C8orf34Q49A92 452 aa11.74□□□□□ -0.53
LINC00943-203ENST00000535544 NBPF6Q5VWK0 638 aa11.73□□□□□ -0.53
LINC00943-203ENST00000535544 NBPF4Q96M43 638 aa11.73□□□□□ -0.53
LINC00943-203ENST00000535544 SEC24BO95487 1268 aa11.73□□□□□ -0.53
LINC00943-203ENST00000535544 RGPD1P0DJD0 1748 aa11.73□□□□□ -0.53
LINC00943-203ENST00000535544 NECTIN2Q92692 538 aa11.73□□□□□ -0.53
LINC00943-203ENST00000535544 BCL11AQ9H165 835 aa11.73□□□□□ -0.53
LINC00943-203ENST00000535544 PDZRN3Q9UPQ7 1066 aa11.73□□□□□ -0.53
LINC00943-203ENST00000535544 AXIN2Q9Y2T1 843 aa11.73□□□□□ -0.53
LINC00943-203ENST00000535544 ANKARQ7Z5J8 1434 aa11.72□□□□□ -0.53
LINC00943-203ENST00000535544 ADGRL3Q9HAR2 1447 aa11.72□□□□□ -0.53
LINC00943-203ENST00000535544 IGSF1Q8N6C5 1336 aa11.72□□□□□ -0.53
LINC00943-203ENST00000535544 CHL1O00533 1208 aa11.72□□□□□ -0.53
LINC00943-203ENST00000535544 CT47B1P0C2W7 299 aaPredicted RBP11.71□□□□□ -0.53
LINC00943-203ENST00000535544 CABLES1Q8TDN4 633 aa11.71□□□□□ -0.53
LINC00943-203ENST00000535544 MS4A1P11836 297 aa11.71□□□□□ -0.54
LINC00943-203ENST00000535544 IL17REQ8NFR9 667 aa11.71□□□□□ -0.54
LINC00943-203ENST00000535544 ZBTB40Q9NUA8 1239 aa11.71□□□□□ -0.54
LINC00943-203ENST00000535544 RGPD2P0DJD1 1756 aa11.71□□□□□ -0.54
LINC00943-203ENST00000535544 SLC4A3P48751 1232 aa11.7□□□□□ -0.54
LINC00943-203ENST00000535544 ZC3H6P61129 1189 aaKnown RBP11.7□□□□□ -0.54
LINC00943-203ENST00000535544 ALDH1L2Q3SY69 923 aa11.7□□□□□ -0.54
LINC00943-203ENST00000535544 STRCP1A6NGW2 1772 aa11.7□□□□□ -0.54
LINC00943-203ENST00000535544 CRB1P82279 1406 aa11.69□□□□□ -0.54
LINC00943-203ENST00000535544 GCP02774 474 aa11.69□□□□□ -0.54
LINC00943-203ENST00000535544 G2E3Q7L622 706 aa11.69□□□□□ -0.54
LINC00943-203ENST00000535544 NWD1Q149M9 1564 aa11.69□□□□□ -0.54
LINC00943-203ENST00000535544 KRT28Q7Z3Y7 464 aa11.69□□□□□ -0.54
LINC00943-203ENST00000535544 LGR6Q9HBX8 967 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms