RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 PDCD7Q8N8D1 485 aaKnown RBP15.91■□□□□ 0.14
TNC-209ENST00000534839 LRPPRCP42704 1394 aaKnown RBP15.9■□□□□ 0.14
TNC-209ENST00000534839 SOX12O15370 315 aa15.9■□□□□ 0.14
TNC-209ENST00000534839 MYOM3Q5VTT5 1437 aa15.9■□□□□ 0.14
TNC-209ENST00000534839 DLC1Q96QB1 1528 aa15.89■□□□□ 0.13
TNC-209ENST00000534839 ROBO2Q9HCK4 1378 aa15.89■□□□□ 0.13
TNC-209ENST00000534839 POTEB2H3BUK9 544 aa15.89■□□□□ 0.13
TNC-209ENST00000534839 MS4A4AQ96JQ5 239 aa15.89■□□□□ 0.13
TNC-209ENST00000534839 OCEL1Q9H607 264 aa15.89■□□□□ 0.13
TNC-209ENST00000534839 SEC24BO95487 1268 aa15.88■□□□□ 0.13
TNC-209ENST00000534839 FBXO22Q8NEZ5 403 aa15.88■□□□□ 0.13
TNC-209ENST00000534839 ABCC5O15440 1437 aa15.87■□□□□ 0.13
TNC-209ENST00000534839 DPY19L2Q6NUT2 758 aa15.87■□□□□ 0.13
TNC-209ENST00000534839 ANO8Q9HCE9 1232 aaPredicted RBP15.87■□□□□ 0.13
TNC-209ENST00000534839 BTG4Q9NY30 223 aa15.87■□□□□ 0.13
TNC-209ENST00000534839 SPATA31A5Q5VU36 1347 aa15.87■□□□□ 0.13
TNC-209ENST00000534839 SPATA31A7Q8IWB4 1347 aa15.87■□□□□ 0.13
TNC-209ENST00000534839 CROCC2H7BZ55 1655 aa15.86■□□□□ 0.13
TNC-209ENST00000534839 PLCG2P16885 1265 aa15.86■□□□□ 0.13
TNC-209ENST00000534839 GPR162Q16538 588 aa15.86■□□□□ 0.13
TNC-209ENST00000534839 BBXQ8WY36 941 aaPredicted RBP15.86■□□□□ 0.13
TNC-209ENST00000534839 TNS4Q8IZW8 715 aa15.85■□□□□ 0.13
TNC-209ENST00000534839 ABCA3Q99758 1704 aa15.84■□□□□ 0.13
TNC-209ENST00000534839 NUTM2FA1L443 756 aa15.83■□□□□ 0.12
TNC-209ENST00000534839 KRT28Q7Z3Y7 464 aa15.83■□□□□ 0.12
TNC-209ENST00000534839 NEXMIFQ5QGS0 1516 aa15.83■□□□□ 0.12
TNC-209ENST00000534839 POTEJP0CG39 1038 aa15.82■□□□□ 0.12
TNC-209ENST00000534839 NLRP6P59044 892 aa15.82■□□□□ 0.12
TNC-209ENST00000534839 IQGAP3Q86VI3 1631 aa15.82■□□□□ 0.12
TNC-209ENST00000534839 CDC42BPGQ6DT37 1551 aa15.81■□□□□ 0.12
TNC-209ENST00000534839 CCDC144AA2RUR9 1427 aa15.8■□□□□ 0.12
TNC-209ENST00000534839 TNS3Q68CZ2 1445 aa15.8■□□□□ 0.12
TNC-209ENST00000534839 GTPBP6O43824 516 aaPredicted RBP15.8■□□□□ 0.12
TNC-209ENST00000534839 DNAJC5GQ8N7S2 189 aa15.8■□□□□ 0.12
TNC-209ENST00000534839 ATP10DQ9P241 1426 aa15.78■□□□□ 0.12
TNC-209ENST00000534839 CHIC2Q9UKJ5 165 aa15.78■□□□□ 0.12
TNC-209ENST00000534839 HFM1A2PYH4 1435 aa15.77■□□□□ 0.12
TNC-209ENST00000534839 PPP1R37O75864 691 aa15.77■□□□□ 0.12
TNC-209ENST00000534839 MAP3K5Q99683 1374 aa15.76■□□□□ 0.11
TNC-209ENST00000534839 ANKRD30AQ9BXX3 1397 aa15.76■□□□□ 0.11
TNC-209ENST00000534839 ARXQ96QS3 562 aa15.76■□□□□ 0.11
TNC-209ENST00000534839 E9PCH4 1651 aa15.76■□□□□ 0.11
TNC-209ENST00000534839 DAPK1P53355 1430 aa15.76■□□□□ 0.11
TNC-209ENST00000534839 COL14A1Q05707 1796 aaKnown RBP15.75■□□□□ 0.11
TNC-209ENST00000534839 ZNF326Q5BKZ1 582 aaKnown RBP15.75■□□□□ 0.11
TNC-209ENST00000534839 LMOD2Q6P5Q4 547 aa15.75■□□□□ 0.11
TNC-209ENST00000534839 GPBP1L1Q9HC44 474 aaPredicted RBP15.75■□□□□ 0.11
TNC-209ENST00000534839 PRAG1Q86YV5 1406 aa15.75■□□□□ 0.11
TNC-209ENST00000534839 SPATA31A1Q5TZJ5 1347 aa15.74■□□□□ 0.11
TNC-209ENST00000534839 PDE3BQ13370 1112 aa15.74■□□□□ 0.11
TNC-209ENST00000534839 MTFR1LQ9H019 292 aa15.74■□□□□ 0.11
TNC-209ENST00000534839 RRBP1Q9P2E9 1410 aaKnown RBP15.74■□□□□ 0.11
TNC-209ENST00000534839 KIF1AQ12756 1690 aa15.73■□□□□ 0.11
TNC-209ENST00000534839 NAIPQ13075 1403 aa15.72■□□□□ 0.11
TNC-209ENST00000534839 APLP1P51693 650 aa15.72■□□□□ 0.11
TNC-209ENST00000534839 GOLGB1Q14789 3259 aaKnown RBP15.71■□□□□ 0.11
TNC-209ENST00000534839 PLSCR1O15162 318 aa15.71■□□□□ 0.11
TNC-209ENST00000534839 PSME1Q06323 249 aa15.71■□□□□ 0.11
TNC-209ENST00000534839 RGPD3A6NKT7 1758 aaPredicted RBP15.7■□□□□ 0.1
TNC-209ENST00000534839 RGPD4Q7Z3J3 1758 aa15.7■□□□□ 0.1
TNC-209ENST00000534839 LHX8Q68G74 356 aa15.7■□□□□ 0.1
TNC-209ENST00000534839 ARHGEF10O15013 1369 aa15.7■□□□□ 0.1
TNC-209ENST00000534839 ZNF526Q8TF50 670 aaPredicted RBP15.69■□□□□ 0.1
TNC-209ENST00000534839 SBNO1A3KN83 1393 aa15.69■□□□□ 0.1
TNC-209ENST00000534839 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.68■□□□□ 0.1
TNC-209ENST00000534839 PAXIP1Q6ZW49 1069 aaPredicted RBP15.67■□□□□ 0.1
TNC-209ENST00000534839 TECPR2O15040 1411 aa15.67■□□□□ 0.1
TNC-209ENST00000534839 SLC15A2Q16348 729 aa15.66■□□□□ 0.1
TNC-209ENST00000534839 STK32BQ9NY57 414 aa15.66■□□□□ 0.1
TNC-209ENST00000534839 USP35Q9P2H5 1018 aa15.65■□□□□ 0.1
TNC-209ENST00000534839 YBX3P16989 372 aaKnown RBP eCLIP15.64■□□□□ 0.09
TNC-209ENST00000534839 SPRYD3Q8NCJ5 442 aa15.64■□□□□ 0.09
TNC-209ENST00000534839 CFAP44Q96MT7 982 aa15.64■□□□□ 0.09
TNC-209ENST00000534839 STRN4Q9NRL3 753 aa15.64■□□□□ 0.09
TNC-209ENST00000534839 FMN2Q9NZ56 1722 aa15.64■□□□□ 0.09
TNC-209ENST00000534839 WWC3Q9ULE0 1092 aa15.64■□□□□ 0.09
TNC-209ENST00000534839 ANKRD50Q9ULJ7 1429 aa15.64■□□□□ 0.09
TNC-209ENST00000534839 BOLA1Q9Y3E2 137 aa15.64■□□□□ 0.09
TNC-209ENST00000534839 BARGINQ6ZT62 677 aa15.63■□□□□ 0.09
TNC-209ENST00000534839 PTF1AQ7RTS3 328 aa15.63■□□□□ 0.09
TNC-209ENST00000534839 JMYQ8N9B5 988 aa15.63■□□□□ 0.09
TNC-209ENST00000534839 L3MBTL3Q96JM7 780 aaPredicted RBP15.63■□□□□ 0.09
TNC-209ENST00000534839 KIF3CO14782 793 aa15.62■□□□□ 0.09
TNC-209ENST00000534839 WAPLQ7Z5K2 1190 aa15.62■□□□□ 0.09
TNC-209ENST00000534839 MICALL2Q8IY33 904 aa15.62■□□□□ 0.09
TNC-209ENST00000534839 TMEM121BQ9BXQ6 578 aaPredicted RBP15.62■□□□□ 0.09
TNC-209ENST00000534839 GRIN3BO60391 1043 aa15.61■□□□□ 0.09
TNC-209ENST00000534839 KANK4Q5T7N3 995 aaPredicted RBP15.61■□□□□ 0.09
TNC-209ENST00000534839 NLGN2Q8NFZ4 835 aa15.61■□□□□ 0.09
TNC-209ENST00000534839 ADCY9O60503 1353 aa15.61■□□□□ 0.09
TNC-209ENST00000534839 PRDM11Q9NQV5 511 aa15.6■□□□□ 0.09
TNC-209ENST00000534839 RYDENQ9NUL5 291 aaKnown RBP15.6■□□□□ 0.09
TNC-209ENST00000534839 KLRG1Q96E93 195 aa15.59■□□□□ 0.09
TNC-209ENST00000534839 OTUD5Q96G74 571 aa15.59■□□□□ 0.09
TNC-209ENST00000534839 NRXN1Q9ULB1 1477 aa15.59■□□□□ 0.09
TNC-209ENST00000534839 RGPD8O14715 1765 aaPredicted RBP15.58■□□□□ 0.08
TNC-209ENST00000534839 PEAK1Q9H792 1746 aa15.57■□□□□ 0.08
TNC-209ENST00000534839 CHRNA2Q15822 529 aa15.57■□□□□ 0.08
TNC-209ENST00000534839 TXNRD1Q16881 649 aa15.57■□□□□ 0.08
TNC-209ENST00000534839 HTRA3P83110 453 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms