RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	NOB1	Q9ULX3	412 aa	Known RBP	18.87	■□□□□ 0.61
NCAPD3-213	ENST00000534532	NBPF8	Q3BBV2	869 aa		18.87	■□□□□ 0.61
NCAPD3-213	ENST00000534532	C22orf23	Q9BZE7	217 aa		18.87	■□□□□ 0.61
NCAPD3-213	ENST00000534532	CADPS2	Q86UW7	1296 aa		18.86	■□□□□ 0.61
NCAPD3-213	ENST00000534532	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	18.86	■□□□□ 0.61
NCAPD3-213	ENST00000534532	FBXO31	Q5XUX0	539 aa	Predicted RBP	18.86	■□□□□ 0.61
NCAPD3-213	ENST00000534532	CHMP5	Q9NZZ3	219 aa		18.86	■□□□□ 0.61
NCAPD3-213	ENST00000534532	SASS6	Q6UVJ0	657 aa		18.85	■□□□□ 0.61
NCAPD3-213	ENST00000534532	EXOC5	O00471	708 aa		18.85	■□□□□ 0.61
NCAPD3-213	ENST00000534532	PTCD1	O75127	700 aa	Known RBP	18.85	■□□□□ 0.61
NCAPD3-213	ENST00000534532	PLB1	Q6P1J6	1458 aa		18.85	■□□□□ 0.61
NCAPD3-213	ENST00000534532	PDE3A	Q14432	1141 aa		18.84	■□□□□ 0.61
NCAPD3-213	ENST00000534532	CT47A1	Q5JQC4	288 aa	Predicted RBP	18.84	■□□□□ 0.61
NCAPD3-213	ENST00000534532	CDK5RAP3	Q96JB5	506 aa		18.84	■□□□□ 0.61
NCAPD3-213	ENST00000534532	LRRCC1	Q9C099	1032 aa		18.84	■□□□□ 0.61
NCAPD3-213	ENST00000534532	NFE2L2	Q16236	605 aa		18.84	■□□□□ 0.61
NCAPD3-213	ENST00000534532	TIAM1	Q13009	1591 aa		18.83	■□□□□ 0.61
NCAPD3-213	ENST00000534532	EPS15	P42566	896 aa		18.83	■□□□□ 0.61
NCAPD3-213	ENST00000534532	IDI1	Q13907	227 aa		18.83	■□□□□ 0.61
NCAPD3-213	ENST00000534532	ZNF428	Q96B54	188 aa		18.83	■□□□□ 0.6
NCAPD3-213	ENST00000534532	TOM1	O60784	492 aa		18.82	■□□□□ 0.6
NCAPD3-213	ENST00000534532	CCAR2	Q8N163	923 aa	Known RBP	18.82	■□□□□ 0.6
NCAPD3-213	ENST00000534532	TXLNA	P40222	546 aa		18.82	■□□□□ 0.6
NCAPD3-213	ENST00000534532	C1orf115	Q9H7X2	142 aa		18.82	■□□□□ 0.6
NCAPD3-213	ENST00000534532	RAI14	Q9P0K7	980 aa		18.82	■□□□□ 0.6
NCAPD3-213	ENST00000534532	ODF2	Q5BJF6	829 aa		18.81	■□□□□ 0.6
NCAPD3-213	ENST00000534532	KRT28	Q7Z3Y7	464 aa		18.81	■□□□□ 0.6
NCAPD3-213	ENST00000534532	CDCA7L	Q96GN5	454 aa		18.81	■□□□□ 0.6
NCAPD3-213	ENST00000534532	PDC	P20941	246 aa		18.81	■□□□□ 0.6
NCAPD3-213	ENST00000534532	NSD3	Q9BZ95	1437 aa		18.81	■□□□□ 0.6
NCAPD3-213	ENST00000534532	WASL	O00401	505 aa	Predicted RBP	18.81	■□□□□ 0.6
NCAPD3-213	ENST00000534532	WDHD1	O75717	1129 aa	Predicted RBP	18.81	■□□□□ 0.6
NCAPD3-213	ENST00000534532	ATP2B1	P20020	1258 aa		18.81	■□□□□ 0.6
NCAPD3-213	ENST00000534532	FKBP4	Q02790	459 aa	Known RBP eCLIP	18.81	■□□□□ 0.6
NCAPD3-213	ENST00000534532	OLFM4	Q6UX06	510 aa		18.81	■□□□□ 0.6
NCAPD3-213	ENST00000534532	SRGAP3	O43295	1099 aa		18.8	■□□□□ 0.6
NCAPD3-213	ENST00000534532	OFD1	O75665	1012 aa		18.8	■□□□□ 0.6
NCAPD3-213	ENST00000534532	TRIM22	Q8IYM9	498 aa		18.8	■□□□□ 0.6
NCAPD3-213	ENST00000534532	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	18.8	■□□□□ 0.6
NCAPD3-213	ENST00000534532	KIF14	Q15058	1648 aa		18.8	■□□□□ 0.6
NCAPD3-213	ENST00000534532	KDM4A	O75164	1064 aa		18.8	■□□□□ 0.6
NCAPD3-213	ENST00000534532	LRP2BP	Q9P2M1	347 aa		18.8	■□□□□ 0.6
NCAPD3-213	ENST00000534532	MCM2	P49736	904 aa		18.79	■□□□□ 0.6
NCAPD3-213	ENST00000534532	SDF4	Q9BRK5	362 aa		18.79	■□□□□ 0.6
NCAPD3-213	ENST00000534532	SOGA3	Q5TF21	947 aa		18.79	■□□□□ 0.6
NCAPD3-213	ENST00000534532	MPRIP	Q6WCQ1	1025 aa		18.79	■□□□□ 0.6
NCAPD3-213	ENST00000534532	HSP90AB3P	Q58FF7	597 aa		18.79	■□□□□ 0.6
NCAPD3-213	ENST00000534532	ATF7IP	Q6VMQ6	1270 aa		18.78	■□□□□ 0.6
NCAPD3-213	ENST00000534532	AACS	Q86V21	672 aa		18.78	■□□□□ 0.6
NCAPD3-213	ENST00000534532	KRT18	P05783	430 aa	Known RBP	18.78	■□□□□ 0.6
NCAPD3-213	ENST00000534532	LARP1	Q6PKG0	1096 aa	Known RBP	18.78	■□□□□ 0.6
NCAPD3-213	ENST00000534532	FANCA	O15360	1455 aa		18.78	■□□□□ 0.6
NCAPD3-213	ENST00000534532	TSHZ2	Q9NRE2	1034 aa		18.78	■□□□□ 0.6
NCAPD3-213	ENST00000534532	CAMSAP2	Q08AD1	1489 aa		18.77	■□□□□ 0.6
NCAPD3-213	ENST00000534532	CCDC69	A6NI79	296 aa		18.77	■□□□□ 0.6
NCAPD3-213	ENST00000534532	UBAP1L	F5GYI3	381 aa		18.77	■□□□□ 0.6
NCAPD3-213	ENST00000534532	CTNNA3	Q9UI47	895 aa		18.77	■□□□□ 0.6
NCAPD3-213	ENST00000534532	CUL7	Q14999	1698 aa		18.77	■□□□□ 0.59
NCAPD3-213	ENST00000534532	TDO2	P48775	406 aa		18.77	■□□□□ 0.59
NCAPD3-213	ENST00000534532	NAT10	Q9H0A0	1025 aa	Known RBP	18.77	■□□□□ 0.59
NCAPD3-213	ENST00000534532	MSH6	P52701	1360 aa		18.76	■□□□□ 0.59
NCAPD3-213	ENST00000534532	NEK4	P51957	841 aa		18.76	■□□□□ 0.59
NCAPD3-213	ENST00000534532	TAF7	Q15545	349 aa	Predicted RBP	18.76	■□□□□ 0.59
NCAPD3-213	ENST00000534532	CAVIN4	Q5BKX8	364 aa		18.76	■□□□□ 0.59
NCAPD3-213	ENST00000534532	METTL24	Q5JXM2	366 aa		18.76	■□□□□ 0.59
NCAPD3-213	ENST00000534532	CCDC85A	Q96PX6	553 aa	Predicted RBP	18.76	■□□□□ 0.59
NCAPD3-213	ENST00000534532	NME9	Q86XW9	330 aa		18.75	■□□□□ 0.59
NCAPD3-213	ENST00000534532	IFIT1	P09914	478 aa	Known RBP	18.75	■□□□□ 0.59
NCAPD3-213	ENST00000534532	AKAP2	Q9Y2D5	859 aa		18.75	■□□□□ 0.59
NCAPD3-213	ENST00000534532	TNR	Q92752	1358 aa		18.75	■□□□□ 0.59
NCAPD3-213	ENST00000534532	ANKRD1	Q15327	319 aa		18.75	■□□□□ 0.59
NCAPD3-213	ENST00000534532	TMPO	P42166	694 aa	Known RBP	18.75	■□□□□ 0.59
NCAPD3-213	ENST00000534532	NAP1L1	P55209	391 aa	Known RBP	18.74	■□□□□ 0.59
NCAPD3-213	ENST00000534532	PDZRN3	Q9UPQ7	1066 aa		18.74	■□□□□ 0.59
NCAPD3-213	ENST00000534532	TEX14	Q8IWB6	1497 aa		18.74	■□□□□ 0.59
NCAPD3-213	ENST00000534532	STK11IP	Q8N1F8	1099 aa		18.74	■□□□□ 0.59
NCAPD3-213	ENST00000534532	CYP46A1	Q9Y6A2	500 aa		18.74	■□□□□ 0.59
NCAPD3-213	ENST00000534532	ZNF396	Q96N95	335 aa	Predicted RBP	18.74	■□□□□ 0.59
NCAPD3-213	ENST00000534532	UBAC1	Q9BSL1	405 aa		18.74	■□□□□ 0.59
NCAPD3-213	ENST00000534532	ZNF287	Q9HBT7	754 aa		18.74	■□□□□ 0.59
NCAPD3-213	ENST00000534532	DUSP27	Q5VZP5	1158 aa		18.73	■□□□□ 0.59
NCAPD3-213	ENST00000534532	TEX13A	Q9BXU3	409 aa	Predicted RBP	18.73	■□□□□ 0.59
NCAPD3-213	ENST00000534532	JMY	Q8N9B5	988 aa		18.73	■□□□□ 0.59
NCAPD3-213	ENST00000534532	ABCF2	Q9UG63	623 aa		18.73	■□□□□ 0.59
NCAPD3-213	ENST00000534532	USHBP1	Q8N6Y0	703 aa		18.73	■□□□□ 0.59
NCAPD3-213	ENST00000534532	RPGR	Q92834	1020 aa	Known RBP	18.73	■□□□□ 0.59
NCAPD3-213	ENST00000534532	IDH1	O75874	414 aa	Known RBP	18.72	■□□□□ 0.59
NCAPD3-213	ENST00000534532	RPAP2	Q8IXW5	612 aa	Predicted RBP	18.72	■□□□□ 0.59
NCAPD3-213	ENST00000534532	NUP133	Q8WUM0	1156 aa		18.72	■□□□□ 0.59
NCAPD3-213	ENST00000534532	AK7	Q96M32	723 aa		18.72	■□□□□ 0.59
NCAPD3-213	ENST00000534532	ANKIB1	Q9P2G1	1089 aa		18.72	■□□□□ 0.59
NCAPD3-213	ENST00000534532	HOMER1	Q86YM7	354 aa		18.72	■□□□□ 0.59
NCAPD3-213	ENST00000534532	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	18.72	■□□□□ 0.59	1e-7	■■■■■ 109.9
NCAPD3-213	ENST00000534532	RABEP1	Q15276	862 aa		18.72	■□□□□ 0.59
NCAPD3-213	ENST00000534532	ZFYVE27	Q5T4F4	411 aa		18.72	■□□□□ 0.59
NCAPD3-213	ENST00000534532	BCL11B	Q9C0K0	894 aa	Predicted RBP	18.72	■□□□□ 0.59
NCAPD3-213	ENST00000534532	MPHOSPH10	O00566	681 aa	Known RBP	18.72	■□□□□ 0.59
NCAPD3-213	ENST00000534532	DHX29	Q7Z478	1369 aa	Known RBP	18.72	■□□□□ 0.59
NCAPD3-213	ENST00000534532	MCM10	Q7L590	875 aa		18.71	■□□□□ 0.59
NCAPD3-213	ENST00000534532	FMNL2	Q96PY5	1086 aa		18.71	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms