RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 SYNE3Q6ZMZ3 975 aa20.81■□□□□ 0.92
PHRF1-206ENST00000534320 ERC1Q8IUD2 1116 aa20.81■□□□□ 0.92
PHRF1-206ENST00000534320 FSD1Q9BTV5 496 aa20.8■□□□□ 0.92
PHRF1-206ENST00000534320 STRN4Q9NRL3 753 aa20.8■□□□□ 0.92
PHRF1-206ENST00000534320 RABEP1Q15276 862 aa20.8■□□□□ 0.92
PHRF1-206ENST00000534320 RPAP2Q8IXW5 612 aaPredicted RBP20.8■□□□□ 0.92
PHRF1-206ENST00000534320 MIS18AQ9NYP9 233 aa20.79■□□□□ 0.92
PHRF1-206ENST00000534320 VPS37CA5D8V6 355 aaPredicted RBP20.79■□□□□ 0.92
PHRF1-206ENST00000534320 BTBD11A6QL63 1104 aa20.79■□□□□ 0.92
PHRF1-206ENST00000534320 CABP4P57796 275 aa20.79■□□□□ 0.92
PHRF1-206ENST00000534320 TRDNQ13061 729 aa20.79■□□□□ 0.92
PHRF1-206ENST00000534320 TARBP1Q13395 1621 aaKnown RBP20.78■□□□□ 0.92
PHRF1-206ENST00000534320 MAGI3Q5TCQ9 1506 aa20.78■□□□□ 0.92
PHRF1-206ENST00000534320 CPLX1O14810 134 aa20.78■□□□□ 0.92
PHRF1-206ENST00000534320 TOM1L2Q6ZVM7 507 aa20.78■□□□□ 0.92
PHRF1-206ENST00000534320 RASSF8Q8NHQ8 419 aa20.78■□□□□ 0.92
PHRF1-206ENST00000534320 NEK4P51957 841 aa20.77■□□□□ 0.92
PHRF1-206ENST00000534320 AKAP17AQ02040 695 aaKnown RBP20.77■□□□□ 0.92
PHRF1-206ENST00000534320 GPS2Q13227 327 aa20.77■□□□□ 0.92
PHRF1-206ENST00000534320 CEP170Q5SW79 1584 aa20.76■□□□□ 0.91
PHRF1-206ENST00000534320 TNRQ92752 1358 aa20.76■□□□□ 0.91
PHRF1-206ENST00000534320 VPS37DQ86XT2 251 aa20.76■□□□□ 0.91
PHRF1-206ENST00000534320 PHF8Q9UPP1 1060 aa20.76■□□□□ 0.91
PHRF1-206ENST00000534320 A0A0U1RQG5 324 aaPredicted RBP20.76■□□□□ 0.91
PHRF1-206ENST00000534320 ZC3H6P61129 1189 aaKnown RBP20.75■□□□□ 0.91
PHRF1-206ENST00000534320 WASHC4Q2M389 1173 aa20.75■□□□□ 0.91
PHRF1-206ENST00000534320 RBM42Q9BTD8 480 aaKnown RBP20.74■□□□□ 0.91
PHRF1-206ENST00000534320 TEX14Q8IWB6 1497 aa20.74■□□□□ 0.91
PHRF1-206ENST00000534320 PSMA5P28066 241 aa20.74■□□□□ 0.91
PHRF1-206ENST00000534320 PRDM11Q9NQV5 511 aa20.74■□□□□ 0.91
PHRF1-206ENST00000534320 FAM13BQ9NYF5 915 aa20.74■□□□□ 0.91
PHRF1-206ENST00000534320 UHRF1BP1Q6BDS2 1440 aa20.74■□□□□ 0.91
PHRF1-206ENST00000534320 HIP1O00291 1037 aa20.74■□□□□ 0.91
PHRF1-206ENST00000534320 SKAP1Q86WV1 359 aa20.74■□□□□ 0.91
PHRF1-206ENST00000534320 MCM2P49736 904 aa20.74■□□□□ 0.91
PHRF1-206ENST00000534320 FYB1O15117 783 aa20.73■□□□□ 0.91
PHRF1-206ENST00000534320 KIF6Q6ZMV9 814 aa20.73■□□□□ 0.91
PHRF1-206ENST00000534320 MYL6BP14649 208 aa20.73■□□□□ 0.91
PHRF1-206ENST00000534320 SRGAP3O43295 1099 aa20.73■□□□□ 0.91
PHRF1-206ENST00000534320 PODXL2Q9NZ53 605 aa20.73■□□□□ 0.91
PHRF1-206ENST00000534320 TRIM29Q14134 588 aa20.72■□□□□ 0.91
PHRF1-206ENST00000534320 DDX54Q8TDD1 881 aaKnown RBP20.72■□□□□ 0.91
PHRF1-206ENST00000534320 MAP7D2Q96T17 732 aa20.72■□□□□ 0.91
PHRF1-206ENST00000534320 TRIM27P14373 513 aa20.72■□□□□ 0.91
PHRF1-206ENST00000534320 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.72■□□□□ 0.91
PHRF1-206ENST00000534320 TEX35Q5T0J7 233 aa20.72■□□□□ 0.91
PHRF1-206ENST00000534320 DNAJC2Q99543 621 aaKnown RBP20.72■□□□□ 0.91
PHRF1-206ENST00000534320 ACEP12821 1306 aa20.72■□□□□ 0.91
PHRF1-206ENST00000534320 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.71■□□□□ 0.91
PHRF1-206ENST00000534320 UHRF1BP1LA0JNW5 1464 aa20.71■□□□□ 0.91
PHRF1-206ENST00000534320 TTC21BQ7Z4L5 1316 aa20.71■□□□□ 0.91
PHRF1-206ENST00000534320 GOLGA6L19H0YKK7 550 aa20.71■□□□□ 0.91
PHRF1-206ENST00000534320 NOL10Q9BSC4 688 aaKnown RBP20.71■□□□□ 0.91
PHRF1-206ENST00000534320 TAF7Q15545 349 aaPredicted RBP20.71■□□□□ 0.91
PHRF1-206ENST00000534320 MTERF4Q7Z6M4 381 aaKnown RBP20.71■□□□□ 0.91
PHRF1-206ENST00000534320 RALYLQ86SE5 291 aaKnown RBP20.7■□□□□ 0.9
PHRF1-206ENST00000534320 IL16Q14005 1332 aa20.7■□□□□ 0.9
PHRF1-206ENST00000534320 BECN2A8MW95 431 aa20.7■□□□□ 0.9
PHRF1-206ENST00000534320 BICD2Q8TD16 824 aa20.7■□□□□ 0.9
PHRF1-206ENST00000534320 USHBP1Q8N6Y0 703 aa20.7■□□□□ 0.9
PHRF1-206ENST00000534320 PUS7Q96PZ0 661 aaKnown RBP20.69■□□□□ 0.9
PHRF1-206ENST00000534320 SIL1Q9H173 461 aa20.69■□□□□ 0.9
PHRF1-206ENST00000534320 MEX3CQ5U5Q3 659 aaKnown RBP20.69■□□□□ 0.9
PHRF1-206ENST00000534320 NFXL1Q6ZNB6 911 aa20.69■□□□□ 0.9
PHRF1-206ENST00000534320 MSH5O43196 834 aa20.69■□□□□ 0.9
PHRF1-206ENST00000534320 AMOTL1Q8IY63 956 aa20.69■□□□□ 0.9
PHRF1-206ENST00000534320 RIMS2Q9UQ26 1411 aa20.68■□□□□ 0.9
PHRF1-206ENST00000534320 MAST1Q9Y2H9 1570 aa20.68■□□□□ 0.9
PHRF1-206ENST00000534320 TRAK2O60296 914 aa20.68■□□□□ 0.9
PHRF1-206ENST00000534320 FBLN1P23142 703 aa20.68■□□□□ 0.9
PHRF1-206ENST00000534320 PER1O15534 1290 aaPredicted RBP20.68■□□□□ 0.9
PHRF1-206ENST00000534320 FOXO3O43524 673 aa20.68■□□□□ 0.9
PHRF1-206ENST00000534320 RBM33Q96EV2 1170 aaKnown RBP20.68■□□□□ 0.9
PHRF1-206ENST00000534320 POLR3AO14802 1390 aaPredicted RBP20.68■□□□□ 0.9
PHRF1-206ENST00000534320 TPM3P06753 285 aa20.67■□□□□ 0.9
PHRF1-206ENST00000534320 PRKCSHP14314 528 aaPredicted RBP20.67■□□□□ 0.9
PHRF1-206ENST00000534320 IL1RAPL2Q9NP60 686 aa20.67■□□□□ 0.9
PHRF1-206ENST00000534320 COL17A1Q9UMD9 1497 aaPredicted RBP20.67■□□□□ 0.9
PHRF1-206ENST00000534320 FAM43AQ8N2R8 423 aa20.67■□□□□ 0.9
PHRF1-206ENST00000534320 K7ELQ4 463 aaPredicted RBP20.66■□□□□ 0.9
PHRF1-206ENST00000534320 EXOC6BQ9Y2D4 811 aa20.66■□□□□ 0.9
PHRF1-206ENST00000534320 AMOTQ4VCS5 1084 aa20.66■□□□□ 0.9
PHRF1-206ENST00000534320 GCC2Q8IWJ2 1684 aa20.66■□□□□ 0.9
PHRF1-206ENST00000534320 ERICH2A1L162 156 aa20.65■□□□□ 0.9
PHRF1-206ENST00000534320 CARD14Q9BXL6 1004 aa20.65■□□□□ 0.9
PHRF1-206ENST00000534320 MAP4K4O95819 1239 aaPredicted RBP20.65■□□□□ 0.9
PHRF1-206ENST00000534320 NOM1Q5C9Z4 860 aaKnown RBP20.65■□□□□ 0.9
PHRF1-206ENST00000534320 CREBRFQ8IUR6 639 aa20.65■□□□□ 0.9
PHRF1-206ENST00000534320 MBIPQ9NS73 344 aa20.65■□□□□ 0.9
PHRF1-206ENST00000534320 ATP7AQ04656 1500 aa20.65■□□□□ 0.9
PHRF1-206ENST00000534320 FAM177BA6PVY3 158 aa20.64■□□□□ 0.9
PHRF1-206ENST00000534320 FOSBP53539 338 aa20.64■□□□□ 0.89
PHRF1-206ENST00000534320 AACSQ86V21 672 aa20.64■□□□□ 0.89
PHRF1-206ENST00000534320 PIK3C2GO75747 1445 aa20.64■□□□□ 0.89
PHRF1-206ENST00000534320 FAM83GA6ND36 823 aa20.63■□□□□ 0.89
PHRF1-206ENST00000534320 PPIP5K1Q6PFW1 1433 aa20.63■□□□□ 0.89
PHRF1-206ENST00000534320 MARCH6O60337 910 aa20.63■□□□□ 0.89
PHRF1-206ENST00000534320 CLSTN1O94985 981 aa20.63■□□□□ 0.89
PHRF1-206ENST00000534320 TBC1D2BQ9UPU7 963 aa20.63■□□□□ 0.89
PHRF1-206ENST00000534320 CCDC27Q2M243 656 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms