RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 UACAQ9BZF9 1416 aa5.33□□□□□ -1.56
CHMP4A-208ENST00000534106 MOXD2PA6NHM9 499 aa5.33□□□□□ -1.56
CHMP4A-208ENST00000534106 KCNH2Q12809 1159 aa5.33□□□□□ -1.56
CHMP4A-208ENST00000534106 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.33□□□□□ -1.56
CHMP4A-208ENST00000534106 EVA1BQ9NVM1 165 aa5.33□□□□□ -1.56
CHMP4A-208ENST00000534106 GLI2P10070 1586 aa5.33□□□□□ -1.56
CHMP4A-208ENST00000534106 PTPRMP28827 1452 aa5.32□□□□□ -1.56
CHMP4A-208ENST00000534106 SPDYE5A6NIY4 337 aa5.32□□□□□ -1.56
CHMP4A-208ENST00000534106 VEGFBP49765 207 aa5.32□□□□□ -1.56
CHMP4A-208ENST00000534106 TRIM46Q7Z4K8 759 aa5.32□□□□□ -1.56
CHMP4A-208ENST00000534106 IRF7Q92985 503 aa5.32□□□□□ -1.56
CHMP4A-208ENST00000534106 TLL2Q9Y6L7 1015 aa5.32□□□□□ -1.56
CHMP4A-208ENST00000534106 RUSC2Q8N2Y8 1516 aa5.32□□□□□ -1.56
CHMP4A-208ENST00000534106 CD109Q6YHK3 1445 aa5.31□□□□□ -1.56
CHMP4A-208ENST00000534106 VARSP26640 1264 aaKnown RBP5.31□□□□□ -1.56
CHMP4A-208ENST00000534106 NNTQ13423 1086 aa5.31□□□□□ -1.56
CHMP4A-208ENST00000534106 SCARF1Q14162 830 aa5.31□□□□□ -1.56
CHMP4A-208ENST00000534106 MLECQ14165 292 aa5.31□□□□□ -1.56
CHMP4A-208ENST00000534106 ARID5BQ14865 1188 aa5.31□□□□□ -1.56
CHMP4A-208ENST00000534106 GIGYF2Q6Y7W6 1299 aaKnown RBP5.31□□□□□ -1.56
CHMP4A-208ENST00000534106 ZNF511Q8NB15 262 aa5.31□□□□□ -1.56
CHMP4A-208ENST00000534106 BEGAINQ9BUH8 593 aa5.31□□□□□ -1.56
CHMP4A-208ENST00000534106 CEBPAP49715 358 aaPredicted RBP5.3□□□□□ -1.56
CHMP4A-208ENST00000534106 AGERQ15109 404 aa5.3□□□□□ -1.56
CHMP4A-208ENST00000534106 DIXDC1Q155Q3 683 aa5.3□□□□□ -1.56
CHMP4A-208ENST00000534106 FAM174AQ8TBP5 190 aa5.3□□□□□ -1.56
CHMP4A-208ENST00000534106 TSC1Q92574 1164 aa5.3□□□□□ -1.56
CHMP4A-208ENST00000534106 ZFP42Q96MM3 310 aa5.3□□□□□ -1.56
CHMP4A-208ENST00000534106 CARMIL2Q6F5E8 1435 aa5.3□□□□□ -1.56
CHMP4A-208ENST00000534106 CARMIL1Q5VZK9 1371 aa5.29□□□□□ -1.56
CHMP4A-208ENST00000534106 UHRF1BP1LA0JNW5 1464 aa5.29□□□□□ -1.56
CHMP4A-208ENST00000534106 TEX14Q8IWB6 1497 aa5.29□□□□□ -1.56
CHMP4A-208ENST00000534106 GMPRP36959 345 aa5.29□□□□□ -1.56
CHMP4A-208ENST00000534106 WDR4P57081 412 aaKnown RBP5.29□□□□□ -1.56
CHMP4A-208ENST00000534106 CSPP1Q1MSJ5 1256 aa5.29□□□□□ -1.56
CHMP4A-208ENST00000534106 BARGINQ6ZT62 677 aa5.29□□□□□ -1.56
CHMP4A-208ENST00000534106 PURBQ96QR8 312 aaKnown RBP5.29□□□□□ -1.56
CHMP4A-208ENST00000534106 TOP2BQ02880 1626 aa5.29□□□□□ -1.56
CHMP4A-208ENST00000534106 ADH1CP00326 375 aa5.28□□□□□ -1.56
CHMP4A-208ENST00000534106 LCE2CQ5TA81 110 aa5.28□□□□□ -1.56
CHMP4A-208ENST00000534106 DESI1Q6ICB0 168 aa5.28□□□□□ -1.56
CHMP4A-208ENST00000534106 MRPL14Q6P1L8 145 aaKnown RBP5.28□□□□□ -1.56
CHMP4A-208ENST00000534106 NPAS3Q8IXF0 933 aa5.28□□□□□ -1.56
CHMP4A-208ENST00000534106 ZSCAN1Q8NBB4 408 aa5.28□□□□□ -1.56
CHMP4A-208ENST00000534106 TBC1D2Q9BYX2 928 aa5.28□□□□□ -1.56
CHMP4A-208ENST00000534106 KDM5BQ9UGL1 1544 aa5.28□□□□□ -1.56
CHMP4A-208ENST00000534106 SLC24A1O60721 1099 aa5.27□□□□□ -1.57
CHMP4A-208ENST00000534106 AMHR2Q16671 573 aa5.27□□□□□ -1.57
CHMP4A-208ENST00000534106 ZC3H15Q8WU90 426 aaKnown RBP5.27□□□□□ -1.57
CHMP4A-208ENST00000534106 ZBTB3Q9H5J0 574 aa5.27□□□□□ -1.57
CHMP4A-208ENST00000534106 DISP1Q96F81 1524 aa5.27□□□□□ -1.57
CHMP4A-208ENST00000534106 NUTM2BA6NNL0 878 aaPredicted RBP5.26□□□□□ -1.57
CHMP4A-208ENST00000534106 NUTM2EB1AL46 878 aaPredicted RBP5.26□□□□□ -1.57
CHMP4A-208ENST00000534106 ZMYND10O75800 440 aa5.26□□□□□ -1.57
CHMP4A-208ENST00000534106 NUTM2DQ5VT03 806 aaPredicted RBP5.26□□□□□ -1.57
CHMP4A-208ENST00000534106 RSBN1LQ6PCB5 846 aaPredicted RBP5.26□□□□□ -1.57
CHMP4A-208ENST00000534106 LYPD8Q6UX82 237 aa5.26□□□□□ -1.57
CHMP4A-208ENST00000534106 NUTM2AQ8IVF1 878 aaPredicted RBP5.26□□□□□ -1.57
CHMP4A-208ENST00000534106 MPNDQ8N594 471 aa5.26□□□□□ -1.57
CHMP4A-208ENST00000534106 FOXJ1Q92949 421 aa5.26□□□□□ -1.57
CHMP4A-208ENST00000534106 PCDHB15Q9Y5E8 787 aa5.26□□□□□ -1.57
CHMP4A-208ENST00000534106 KIF21BO75037 1637 aa5.26□□□□□ -1.57
CHMP4A-208ENST00000534106 MAP3K4Q9Y6R4 1608 aa5.26□□□□□ -1.57
CHMP4A-208ENST00000534106 WDR7Q9Y4E6 1490 aa5.26□□□□□ -1.57
CHMP4A-208ENST00000534106 PCF11O94913 1555 aaKnown RBP5.25□□□□□ -1.57
CHMP4A-208ENST00000534106 MAGI3Q5TCQ9 1506 aa5.25□□□□□ -1.57
CHMP4A-208ENST00000534106 SOBPA7XYQ1 873 aa5.25□□□□□ -1.57
CHMP4A-208ENST00000534106 H3BM21 787 aa5.25□□□□□ -1.57
CHMP4A-208ENST00000534106 UPP2O95045 317 aa5.25□□□□□ -1.57
CHMP4A-208ENST00000534106 ZIC2O95409 532 aaPredicted RBP5.25□□□□□ -1.57
CHMP4A-208ENST00000534106 TIMP2P16035 220 aa5.25□□□□□ -1.57
CHMP4A-208ENST00000534106 HRCP23327 699 aa5.25□□□□□ -1.57
CHMP4A-208ENST00000534106 C6orf118Q5T5N4 469 aa5.25□□□□□ -1.57
CHMP4A-208ENST00000534106 RIC3Q7Z5B4 369 aa5.25□□□□□ -1.57
CHMP4A-208ENST00000534106 MAP10Q9P2G4 905 aa5.25□□□□□ -1.57
CHMP4A-208ENST00000534106 CUL7Q14999 1698 aa5.24□□□□□ -1.57
CHMP4A-208ENST00000534106 CFAP99D6REC4 459 aa5.24□□□□□ -1.57
CHMP4A-208ENST00000534106 MAN1A2O60476 641 aa5.24□□□□□ -1.57
CHMP4A-208ENST00000534106 GJA5P36382 358 aa5.24□□□□□ -1.57
CHMP4A-208ENST00000534106 BPHLQ86WA6 291 aaPredicted RBP5.24□□□□□ -1.57
CHMP4A-208ENST00000534106 CABLES1Q8TDN4 633 aa5.24□□□□□ -1.57
CHMP4A-208ENST00000534106 KIF27Q86VH2 1401 aa5.23□□□□□ -1.57
CHMP4A-208ENST00000534106 BIVM-ERCC5R4GMW8 1640 aa5.23□□□□□ -1.57
CHMP4A-208ENST00000534106 SPTLC1O15269 473 aa5.23□□□□□ -1.57
CHMP4A-208ENST00000534106 BMP2P12643 396 aa5.23□□□□□ -1.57
CHMP4A-208ENST00000534106 NR5A1Q13285 461 aa5.23□□□□□ -1.57
CHMP4A-208ENST00000534106 PARP9Q8IXQ6 854 aa5.23□□□□□ -1.57
CHMP4A-208ENST00000534106 ZFAND3Q9H8U3 227 aa5.23□□□□□ -1.57
CHMP4A-208ENST00000534106 ADAMTSL3P82987 1691 aa5.23□□□□□ -1.57
CHMP4A-208ENST00000534106 ERBB4Q15303 1308 aa5.23□□□□□ -1.57
CHMP4A-208ENST00000534106 UBAP1LF5GYI3 381 aa5.22□□□□□ -1.57
CHMP4A-208ENST00000534106 PRPF38BQ5VTL8 546 aaKnown RBP5.22□□□□□ -1.57
CHMP4A-208ENST00000534106 ARMC2Q8NEN0 867 aa5.22□□□□□ -1.57
CHMP4A-208ENST00000534106 ITPKCQ96DU7 683 aa5.22□□□□□ -1.57
CHMP4A-208ENST00000534106 AK7Q96M32 723 aa5.22□□□□□ -1.57
CHMP4A-208ENST00000534106 CDK15Q96Q40 435 aa5.22□□□□□ -1.57
CHMP4A-208ENST00000534106 ZCCHC11Q5TAX3 1644 aaKnown RBP5.22□□□□□ -1.57
CHMP4A-208ENST00000534106 ARAP3Q8WWN8 1544 aa5.22□□□□□ -1.57
CHMP4A-208ENST00000534106 TRIM66O15016 1216 aa5.21□□□□□ -1.58
CHMP4A-208ENST00000534106 F12P00748 615 aaPredicted RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms