RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 TRIM27P14373 513 aa9.29□□□□□ -0.92
RNPC3-209ENST00000533834 ZBTB40Q9NUA8 1239 aa9.29□□□□□ -0.92
RNPC3-209ENST00000533834 XIRP1Q702N8 1843 aaKnown RBP9.29□□□□□ -0.92
RNPC3-209ENST00000533834 ABCC4O15439 1325 aa9.29□□□□□ -0.92
RNPC3-209ENST00000533834 FBLN1P23142 703 aa9.29□□□□□ -0.92
RNPC3-209ENST00000533834 LTKP29376 864 aa9.29□□□□□ -0.92
RNPC3-209ENST00000533834 ZRANB1Q9UGI0 708 aa9.29□□□□□ -0.92
RNPC3-209ENST00000533834 SLIT3O75094 1523 aa9.28□□□□□ -0.92
RNPC3-209ENST00000533834 CHGAP10645 457 aaKnown RBP9.28□□□□□ -0.92
RNPC3-209ENST00000533834 DDIT3P35638 169 aa9.28□□□□□ -0.92
RNPC3-209ENST00000533834 PLEKHG3A1L390 1219 aa9.28□□□□□ -0.92
RNPC3-209ENST00000533834 FCHSD2O94868 740 aa9.28□□□□□ -0.92
RNPC3-209ENST00000533834 SSH1Q8WYL5 1049 aa9.28□□□□□ -0.92
RNPC3-209ENST00000533834 TSR2Q969E8 191 aaKnown RBP9.28□□□□□ -0.92
RNPC3-209ENST00000533834 SMC5Q8IY18 1101 aa9.27□□□□□ -0.92
RNPC3-209ENST00000533834 COG6Q9Y2V7 657 aa9.27□□□□□ -0.92
RNPC3-209ENST00000533834 RGPD5Q99666 1765 aa9.27□□□□□ -0.93
RNPC3-209ENST00000533834 ANKARQ7Z5J8 1434 aa9.27□□□□□ -0.93
RNPC3-209ENST00000533834 DSG3P32926 999 aa9.27□□□□□ -0.93
RNPC3-209ENST00000533834 ALDH1L2Q3SY69 923 aa9.27□□□□□ -0.93
RNPC3-209ENST00000533834 CNKSR2Q8WXI2 1034 aa9.27□□□□□ -0.93
RNPC3-209ENST00000533834 KIF24Q5T7B8 1368 aa9.26□□□□□ -0.93
RNPC3-209ENST00000533834 TNNT2P45379 298 aaPredicted RBP9.26□□□□□ -0.93
RNPC3-209ENST00000533834 SIRT2Q8IXJ6 389 aa9.26□□□□□ -0.93
RNPC3-209ENST00000533834 TERF2IPQ9NYB0 399 aa9.26□□□□□ -0.93
RNPC3-209ENST00000533834 STK26Q9P289 416 aa9.26□□□□□ -0.93
RNPC3-209ENST00000533834 VAMP4O75379 141 aa9.26□□□□□ -0.93
RNPC3-209ENST00000533834 EXOSC9Q06265 439 aaKnown RBP9.26□□□□□ -0.93
RNPC3-209ENST00000533834 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.26□□□□□ -0.93
RNPC3-209ENST00000533834 NME9Q86XW9 330 aa9.25□□□□□ -0.93
RNPC3-209ENST00000533834 MRPL50Q8N5N7 158 aaKnown RBP9.25□□□□□ -0.93
RNPC3-209ENST00000533834 EMILIN1Q9Y6C2 1016 aa9.25□□□□□ -0.93
RNPC3-209ENST00000533834 ZNF692Q9BU19 519 aaPredicted RBP9.24□□□□□ -0.93
RNPC3-209ENST00000533834 MYT1LQ9UL68 1186 aa9.24□□□□□ -0.93
RNPC3-209ENST00000533834 C5P01031 1676 aa9.24□□□□□ -0.93
RNPC3-209ENST00000533834 ZBTB7BO15156 539 aaPredicted RBP9.24□□□□□ -0.93
RNPC3-209ENST00000533834 SAFB2Q14151 953 aaKnown RBP eCLIP9.24□□□□□ -0.93
RNPC3-209ENST00000533834 ABCC6O95255 1503 aa9.24□□□□□ -0.93
RNPC3-209ENST00000533834 DIAPH1O60610 1272 aaKnown RBP9.24□□□□□ -0.93
RNPC3-209ENST00000533834 NUDT16Q96DE0 195 aaKnown RBP9.24□□□□□ -0.93
RNPC3-209ENST00000533834 TBC1D32Q96NH3 1257 aa9.24□□□□□ -0.93
RNPC3-209ENST00000533834 MYH16Q9H6N6 1097 aa9.24□□□□□ -0.93
RNPC3-209ENST00000533834 MAPK8IP3Q9UPT6 1336 aa9.23□□□□□ -0.93
RNPC3-209ENST00000533834 SHANK3Q9BYB0 1731 aa9.23□□□□□ -0.93
RNPC3-209ENST00000533834 ARHGEF10O15013 1369 aa9.23□□□□□ -0.93
RNPC3-209ENST00000533834 SRPK2P78362 688 aaKnown RBP9.23□□□□□ -0.93
RNPC3-209ENST00000533834 NFE2L2Q16236 605 aa9.23□□□□□ -0.93
RNPC3-209ENST00000533834 CAPN15O75808 1086 aa9.23□□□□□ -0.93
RNPC3-209ENST00000533834 ATF7IPQ6VMQ6 1270 aa9.23□□□□□ -0.93
RNPC3-209ENST00000533834 TSPYL6Q8N831 410 aa9.23□□□□□ -0.93
RNPC3-209ENST00000533834 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.23□□□□□ -0.93
RNPC3-209ENST00000533834 ARHGAP45Q92619 1136 aa9.23□□□□□ -0.93
RNPC3-209ENST00000533834 U2AF1L5P0DN76 240 aaPredicted RBP9.23□□□□□ -0.93
RNPC3-209ENST00000533834 ANP32AP39687 249 aaKnown RBP9.23□□□□□ -0.93
RNPC3-209ENST00000533834 U2AF1Q01081 240 aaKnown RBP eCLIP9.23□□□□□ -0.93
RNPC3-209ENST00000533834 CFAP53Q96M91 514 aa9.23□□□□□ -0.93
RNPC3-209ENST00000533834 KIF2CQ99661 725 aa9.23□□□□□ -0.93
RNPC3-209ENST00000533834 PDZRN3Q9UPQ7 1066 aa9.23□□□□□ -0.93
RNPC3-209ENST00000533834 PKD1L3Q7Z443 1732 aa9.22□□□□□ -0.93
RNPC3-209ENST00000533834 PARP4Q9UKK3 1724 aaKnown RBP9.22□□□□□ -0.93
RNPC3-209ENST00000533834 SCN11AQ9UI33 1791 aa9.22□□□□□ -0.93
RNPC3-209ENST00000533834 PAPPAQ13219 1627 aa9.22□□□□□ -0.93
RNPC3-209ENST00000533834 KIAA0232Q92628 1395 aa9.22□□□□□ -0.93
RNPC3-209ENST00000533834 IFT57Q9NWB7 429 aa9.21□□□□□ -0.93
RNPC3-209ENST00000533834 NOB1Q9ULX3 412 aaKnown RBP9.21□□□□□ -0.93
RNPC3-209ENST00000533834 TTC21BQ7Z4L5 1316 aa9.21□□□□□ -0.93
RNPC3-209ENST00000533834 RTL1A6NKG5 1358 aa9.21□□□□□ -0.93
RNPC3-209ENST00000533834 TMEM57Q8N5G2 664 aa9.21□□□□□ -0.93
RNPC3-209ENST00000533834 ZNF428Q96B54 188 aa9.21□□□□□ -0.93
RNPC3-209ENST00000533834 USP35Q9P2H5 1018 aa9.21□□□□□ -0.93
RNPC3-209ENST00000533834 NUCB1Q02818 461 aa9.21□□□□□ -0.94
RNPC3-209ENST00000533834 MBIPQ9NS73 344 aa9.21□□□□□ -0.94
RNPC3-209ENST00000533834 MSH6P52701 1360 aa9.21□□□□□ -0.94
RNPC3-209ENST00000533834 ABCA3Q99758 1704 aa9.21□□□□□ -0.94
RNPC3-209ENST00000533834 DZIP1LQ8IYY4 767 aaKnown RBP9.2□□□□□ -0.94
RNPC3-209ENST00000533834 BCL2L13Q9BXK5 485 aa9.2□□□□□ -0.94
RNPC3-209ENST00000533834 CCDC61Q9Y6R9 512 aa9.2□□□□□ -0.94
RNPC3-209ENST00000533834 KIF1AQ12756 1690 aa9.2□□□□□ -0.94
RNPC3-209ENST00000533834 PRKAR2BP31323 418 aa9.2□□□□□ -0.94
RNPC3-209ENST00000533834 RIPK4P57078 832 aa9.2□□□□□ -0.94
RNPC3-209ENST00000533834 ZKSCAN2Q63HK3 967 aa9.2□□□□□ -0.94
RNPC3-209ENST00000533834 TXNDC2Q86VQ3 553 aa9.2□□□□□ -0.94
RNPC3-209ENST00000533834 PXDNLA1KZ92 1463 aa9.2□□□□□ -0.94
RNPC3-209ENST00000533834 EIF4A2Q14240 407 aaKnown RBP9.2□□□□□ -0.94
RNPC3-209ENST00000533834 HDGFL2Q7Z4V5 671 aaPredicted RBP9.2□□□□□ -0.94
RNPC3-209ENST00000533834 PMFBP1Q8TBY8 1022 aa9.2□□□□□ -0.94
RNPC3-209ENST00000533834 ZBTB47Q9UFB7 747 aaPredicted RBP9.2□□□□□ -0.94
RNPC3-209ENST00000533834 UBR2Q8IWV8 1755 aa9.2□□□□□ -0.94
RNPC3-209ENST00000533834 DEKP35659 375 aaKnown RBP9.19□□□□□ -0.94
RNPC3-209ENST00000533834 IGSF1Q8N6C5 1336 aa9.19□□□□□ -0.94
RNPC3-209ENST00000533834 C8orf58Q8NAV2 365 aa9.18□□□□□ -0.94
RNPC3-209ENST00000533834 CFAP44Q96MT7 982 aa9.18□□□□□ -0.94
RNPC3-209ENST00000533834 ACEP12821 1306 aa9.18□□□□□ -0.94
RNPC3-209ENST00000533834 CHL1O00533 1208 aa9.18□□□□□ -0.94
RNPC3-209ENST00000533834 SALL3Q9BXA9 1300 aa9.18□□□□□ -0.94
RNPC3-209ENST00000533834 NEUROD2Q15784 382 aa9.18□□□□□ -0.94
RNPC3-209ENST00000533834 TBX22Q9Y458 520 aa9.18□□□□□ -0.94
RNPC3-209ENST00000533834 SBNO1A3KN83 1393 aa9.18□□□□□ -0.94
RNPC3-209ENST00000533834 POGKQ9P215 609 aa9.17□□□□□ -0.94
RNPC3-209ENST00000533834 RBM25P49756 843 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms