RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 SIRT2Q8IXJ6 389 aa24.12■■□□□ 1.45
CAPN1-226ENST00000533820 ZNF692Q9BU19 519 aaPredicted RBP24.12■■□□□ 1.45
CAPN1-226ENST00000533820 OSCARQ8IYS5 282 aa24.12■■□□□ 1.45
CAPN1-226ENST00000533820 C8orf58Q8NAV2 365 aa24.12■■□□□ 1.45
CAPN1-226ENST00000533820 PPIP5K1Q6PFW1 1433 aa24.11■■□□□ 1.45
CAPN1-226ENST00000533820 TNPO1Q92973 898 aaKnown RBP24.11■■□□□ 1.45
CAPN1-226ENST00000533820 TBC1D9Q6ZT07 1266 aa24.11■■□□□ 1.45
CAPN1-226ENST00000533820 LRRC7Q96NW7 1537 aa24.1■■□□□ 1.45
CAPN1-226ENST00000533820 TWISTNBQ3B726 338 aaPredicted RBP24.1■■□□□ 1.45
CAPN1-226ENST00000533820 RBM25P49756 843 aaKnown RBP24.09■■□□□ 1.45
CAPN1-226ENST00000533820 PNPLA6Q8IY17 1366 aa24.08■■□□□ 1.45
CAPN1-226ENST00000533820 KRT24Q2M2I5 525 aa24.08■■□□□ 1.45
CAPN1-226ENST00000533820 BMP2KLQ5H9B9 411 aa24.08■■□□□ 1.45
CAPN1-226ENST00000533820 FSD2A1L4K1 749 aa24.07■■□□□ 1.44
CAPN1-226ENST00000533820 BCL11BQ9C0K0 894 aaPredicted RBP24.07■■□□□ 1.44
CAPN1-226ENST00000533820 KIF2CQ99661 725 aa24.07■■□□□ 1.44
CAPN1-226ENST00000533820 SOX12O15370 315 aa24.06■■□□□ 1.44
CAPN1-226ENST00000533820 GNAI1P63096 354 aa24.06■■□□□ 1.44
CAPN1-226ENST00000533820 C16orf71Q8IYS4 520 aaPredicted RBP24.05■■□□□ 1.44
CAPN1-226ENST00000533820 NUTM2FA1L443 756 aa24.05■■□□□ 1.44
CAPN1-226ENST00000533820 DDX11L8A8MPP1 907 aa24.05■■□□□ 1.44
CAPN1-226ENST00000533820 TXNDC2Q86VQ3 553 aa24.04■■□□□ 1.44
CAPN1-226ENST00000533820 GCC1Q96CN9 775 aa24.04■■□□□ 1.44
CAPN1-226ENST00000533820 FAM135BQ49AJ0 1406 aa24.04■■□□□ 1.44
CAPN1-226ENST00000533820 DIP2CQ9Y2E4 1556 aa24.04■■□□□ 1.44
CAPN1-226ENST00000533820 AEBP2Q6ZN18 517 aaPredicted RBP24.03■■□□□ 1.44
CAPN1-226ENST00000533820 IL13P35225 146 aa24.02■■□□□ 1.44
CAPN1-226ENST00000533820 GRPEL1Q9HAV7 217 aa24.02■■□□□ 1.44
CAPN1-226ENST00000533820 SNX21Q969T3 373 aa24.01■■□□□ 1.43
CAPN1-226ENST00000533820 AEBP1Q8IUX7 1158 aa24.01■■□□□ 1.43
CAPN1-226ENST00000533820 GAS2L2Q8NHY3 880 aa24.01■■□□□ 1.43
CAPN1-226ENST00000533820 IFT57Q9NWB7 429 aa24.01■■□□□ 1.43
CAPN1-226ENST00000533820 ZFYVE9O95405 1425 aa24.01■■□□□ 1.43
CAPN1-226ENST00000533820 SSFA2P28290 1259 aa24■■□□□ 1.43
CAPN1-226ENST00000533820 OTUD7AQ8TE49 926 aaPredicted RBP24■■□□□ 1.43
CAPN1-226ENST00000533820 GAS2L3Q86XJ1 694 aa24■■□□□ 1.43
CAPN1-226ENST00000533820 ARHGEF40Q8TER5 1519 aa24■■□□□ 1.43
CAPN1-226ENST00000533820 CFAP74Q9C0B2 1584 aa23.99■■□□□ 1.43
CAPN1-226ENST00000533820 DDIT3P35638 169 aa23.99■■□□□ 1.43
CAPN1-226ENST00000533820 CALD1Q05682 793 aaKnown RBP23.99■■□□□ 1.43
CAPN1-226ENST00000533820 ARHGAP31Q2M1Z3 1444 aa23.99■■□□□ 1.43
CAPN1-226ENST00000533820 GSPT1P15170 499 aaKnown RBP23.99■■□□□ 1.43
CAPN1-226ENST00000533820 MRE11P49959 708 aa23.99■■□□□ 1.43
CAPN1-226ENST00000533820 K7ELQ4 463 aaPredicted RBP23.98■■□□□ 1.43
CAPN1-226ENST00000533820 SMARCA5O60264 1052 aaPredicted RBP23.98■■□□□ 1.43
CAPN1-226ENST00000533820 GBP4Q96PP9 640 aa23.98■■□□□ 1.43
CAPN1-226ENST00000533820 COG3Q96JB2 828 aa23.98■■□□□ 1.43
CAPN1-226ENST00000533820 ALKQ9UM73 1620 aa23.97■■□□□ 1.43
CAPN1-226ENST00000533820 CFAP44Q96MT7 982 aa23.97■■□□□ 1.43
CAPN1-226ENST00000533820 MED14O60244 1454 aa23.97■■□□□ 1.43
CAPN1-226ENST00000533820 MCM10Q7L590 875 aa23.97■■□□□ 1.43
CAPN1-226ENST00000533820 ZNF428Q96B54 188 aa23.97■■□□□ 1.43
CAPN1-226ENST00000533820 TMEM131LA2VDJ0 1609 aa23.96■■□□□ 1.43
CAPN1-226ENST00000533820 ABCC4O15439 1325 aa23.96■■□□□ 1.43
CAPN1-226ENST00000533820 ARHGAP45Q92619 1136 aa23.96■■□□□ 1.43
CAPN1-226ENST00000533820 MAP2P11137 1827 aaKnown RBP23.96■■□□□ 1.43
CAPN1-226ENST00000533820 CDC45O75419 566 aa23.96■■□□□ 1.43
CAPN1-226ENST00000533820 RAB3GAP1Q15042 981 aa23.96■■□□□ 1.43
CAPN1-226ENST00000533820 ZNF853P0CG23 659 aa23.95■■□□□ 1.43
CAPN1-226ENST00000533820 CHMP4BQ9H444 224 aaKnown RBP23.95■■□□□ 1.42
CAPN1-226ENST00000533820 MIS18AQ9NYP9 233 aa23.95■■□□□ 1.42
CAPN1-226ENST00000533820 SULT6B1Q6IMI4 303 aa23.95■■□□□ 1.42
CAPN1-226ENST00000533820 PLEKHM2Q8IWE5 1019 aa23.95■■□□□ 1.42
CAPN1-226ENST00000533820 NUDT16Q96DE0 195 aaKnown RBP23.95■■□□□ 1.42
CAPN1-226ENST00000533820 API5Q9BZZ5 524 aaKnown RBP23.95■■□□□ 1.42
CAPN1-226ENST00000533820 WASLO00401 505 aaPredicted RBP23.94■■□□□ 1.42
CAPN1-226ENST00000533820 BRPF1P55201 1214 aaPredicted RBP23.94■■□□□ 1.42
CAPN1-226ENST00000533820 NCOA3Q9Y6Q9 1424 aa23.94■■□□□ 1.42
CAPN1-226ENST00000533820 PRDM4Q9UKN5 801 aa23.93■■□□□ 1.42
CAPN1-226ENST00000533820 CYB5RLQ6IPT4 315 aa23.93■■□□□ 1.42
CAPN1-226ENST00000533820 NEO1Q92859 1461 aa23.93■■□□□ 1.42
CAPN1-226ENST00000533820 PDIA4P13667 645 aaKnown RBP23.92■■□□□ 1.42
CAPN1-226ENST00000533820 ANKRD26Q9UPS8 1709 aa23.92■■□□□ 1.42
CAPN1-226ENST00000533820 NCLP19338 710 aaKnown RBP23.92■■□□□ 1.42
CAPN1-226ENST00000533820 PTCH1Q13635 1447 aa23.91■■□□□ 1.42
CAPN1-226ENST00000533820 PREX1Q8TCU6 1659 aa23.91■■□□□ 1.42
CAPN1-226ENST00000533820 AK9Q5TCS8 1911 aa23.9■■□□□ 1.42
CAPN1-226ENST00000533820 KIF20BQ96Q89 1820 aa23.9■■□□□ 1.42
CAPN1-226ENST00000533820 CIZ1Q9ULV3 898 aaPredicted RBP23.9■■□□□ 1.42
CAPN1-226ENST00000533820 LMOD3Q0VAK6 560 aa23.89■■□□□ 1.42
CAPN1-226ENST00000533820 SLC4A10Q6U841 1118 aa23.89■■□□□ 1.42
CAPN1-226ENST00000533820 RIMS2Q9UQ26 1411 aa23.88■■□□□ 1.41
CAPN1-226ENST00000533820 MEIS3Q99687 375 aa23.88■■□□□ 1.41
CAPN1-226ENST00000533820 DDX49Q9Y6V7 483 aaKnown RBP23.88■■□□□ 1.41
CAPN1-226ENST00000533820 CLCN1P35523 988 aa23.87■■□□□ 1.41
CAPN1-226ENST00000533820 PKP1Q13835 747 aa23.87■■□□□ 1.41
CAPN1-226ENST00000533820 ERBB4Q15303 1308 aa23.87■■□□□ 1.41
CAPN1-226ENST00000533820 TRIM44Q96DX7 344 aaPredicted RBP23.87■■□□□ 1.41
CAPN1-226ENST00000533820 DCTPP1Q9H773 170 aa23.87■■□□□ 1.41
CAPN1-226ENST00000533820 PIK3R4Q99570 1358 aa23.87■■□□□ 1.41
CAPN1-226ENST00000533820 METP08581 1390 aa23.86■■□□□ 1.41
CAPN1-226ENST00000533820 TTC22Q5TAA0 569 aa23.86■■□□□ 1.41
CAPN1-226ENST00000533820 FOXD4L5Q5VV16 416 aaPredicted RBP23.86■■□□□ 1.41
CAPN1-226ENST00000533820 FOXD4L4Q8WXT5 416 aaPredicted RBP23.86■■□□□ 1.41
CAPN1-226ENST00000533820 MCTP1Q6DN14 999 aa23.86■■□□□ 1.41
CAPN1-226ENST00000533820 CCDC61Q9Y6R9 512 aa23.86■■□□□ 1.41
CAPN1-226ENST00000533820 FAM69CQ0P6D2 419 aa23.85■■□□□ 1.41
CAPN1-226ENST00000533820 CHAMP1Q96JM3 812 aa23.85■■□□□ 1.41
CAPN1-226ENST00000533820 F6X3S4 739 aa23.85■■□□□ 1.41
CAPN1-226ENST00000533820 EIF4A2Q14240 407 aaKnown RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms