RNA–Protein interactions for RNA: ENST00000533232.5

SOX9-AS1-212, SOX9 antisense RNA 1, humanhuman

TSL 1 (best)

Gene SOX9-AS1, Length 1,739 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-212ENST00000533232 CLUAP1Q96AJ1 413 aa10.05□□□□□ -0.8
SOX9-AS1-212ENST00000533232 SIGLEC1Q9BZZ2 1709 aa10.05□□□□□ -0.8
SOX9-AS1-212ENST00000533232 BCL11AQ9H165 835 aa10.05□□□□□ -0.8
SOX9-AS1-212ENST00000533232 TERF2IPQ9NYB0 399 aa10.05□□□□□ -0.8
SOX9-AS1-212ENST00000533232 BCAR3O75815 825 aa10.04□□□□□ -0.8
SOX9-AS1-212ENST00000533232 PDAP1Q13442 181 aaKnown RBP10.04□□□□□ -0.8
SOX9-AS1-212ENST00000533232 MED14O60244 1454 aa10.04□□□□□ -0.8
SOX9-AS1-212ENST00000533232 TULP4Q9NRJ4 1543 aa10.04□□□□□ -0.8
SOX9-AS1-212ENST00000533232 ABCC11Q96J66 1382 aa10.03□□□□□ -0.8
SOX9-AS1-212ENST00000533232 RARSP54136 660 aaKnown RBP10.03□□□□□ -0.8
SOX9-AS1-212ENST00000533232 IDI1Q13907 227 aa10.03□□□□□ -0.8
SOX9-AS1-212ENST00000533232 PREX1Q8TCU6 1659 aa10.03□□□□□ -0.8
SOX9-AS1-212ENST00000533232 RAPGEF3O95398 923 aa10.02□□□□□ -0.8
SOX9-AS1-212ENST00000533232 TNNT2P45379 298 aaPredicted RBP10.02□□□□□ -0.8
SOX9-AS1-212ENST00000533232 CLTCQ00610 1675 aaKnown RBP10.02□□□□□ -0.81
SOX9-AS1-212ENST00000533232 ANKRD26Q9UPS8 1709 aa10.02□□□□□ -0.81
SOX9-AS1-212ENST00000533232 ADGRB2O60241 1585 aa10.02□□□□□ -0.81
SOX9-AS1-212ENST00000533232 TMEM131LA2VDJ0 1609 aa10.02□□□□□ -0.81
SOX9-AS1-212ENST00000533232 NEFMP07197 916 aa10.02□□□□□ -0.81
SOX9-AS1-212ENST00000533232 U2AF1L5P0DN76 240 aaPredicted RBP10.02□□□□□ -0.81
SOX9-AS1-212ENST00000533232 SRPK2P78362 688 aaKnown RBP10.02□□□□□ -0.81
SOX9-AS1-212ENST00000533232 U2AF1Q01081 240 aaKnown RBP eCLIP10.02□□□□□ -0.81
SOX9-AS1-212ENST00000533232 C8orf34Q49A92 452 aa10.02□□□□□ -0.81
SOX9-AS1-212ENST00000533232 HDGFL2Q7Z4V5 671 aaPredicted RBP10.02□□□□□ -0.81
SOX9-AS1-212ENST00000533232 RWDD1Q9H446 243 aaPredicted RBP10.02□□□□□ -0.81
SOX9-AS1-212ENST00000533232 VIRMAQ69YN4 1812 aaKnown RBP10.01□□□□□ -0.81
SOX9-AS1-212ENST00000533232 RGS3P49796 1198 aa10.01□□□□□ -0.81
SOX9-AS1-212ENST00000533232 NEUROD2Q15784 382 aa10.01□□□□□ -0.81
SOX9-AS1-212ENST00000533232 POGKQ9P215 609 aa10.01□□□□□ -0.81
SOX9-AS1-212ENST00000533232 IL16Q14005 1332 aa10.01□□□□□ -0.81
SOX9-AS1-212ENST00000533232 GPR153Q6NV75 609 aa10□□□□□ -0.81
SOX9-AS1-212ENST00000533232 FRAT1Q92837 279 aaPredicted RBP10□□□□□ -0.81
SOX9-AS1-212ENST00000533232 UPF2Q9HAU5 1272 aaKnown RBP9.99□□□□□ -0.81
SOX9-AS1-212ENST00000533232 CABP2Q9NPB3 220 aa9.99□□□□□ -0.81
SOX9-AS1-212ENST00000533232 COG6Q9Y2V7 657 aa9.99□□□□□ -0.81
SOX9-AS1-212ENST00000533232 YTHDC2Q9H6S0 1430 aaKnown RBP9.99□□□□□ -0.81
SOX9-AS1-212ENST00000533232 REREQ9P2R6 1566 aa9.99□□□□□ -0.81
SOX9-AS1-212ENST00000533232 PTPRMP28827 1452 aa9.99□□□□□ -0.81
SOX9-AS1-212ENST00000533232 A0A1W2PP64 1363 aa9.99□□□□□ -0.81
SOX9-AS1-212ENST00000533232 LSM11P83369 360 aaKnown RBP eCLIP9.99□□□□□ -0.81
SOX9-AS1-212ENST00000533232 ZKSCAN2Q63HK3 967 aa9.99□□□□□ -0.81
SOX9-AS1-212ENST00000533232 HCSTQ9UBK5 93 aa9.99□□□□□ -0.81
SOX9-AS1-212ENST00000533232 BECN1Q14457 450 aa9.98□□□□□ -0.81
SOX9-AS1-212ENST00000533232 PANK1Q8TE04 598 aa9.98□□□□□ -0.81
SOX9-AS1-212ENST00000533232 RRP7AQ9Y3A4 280 aaKnown RBP9.98□□□□□ -0.81
SOX9-AS1-212ENST00000533232 DLC1Q96QB1 1528 aa9.97□□□□□ -0.81
SOX9-AS1-212ENST00000533232 IGHDP01880 384 aa9.97□□□□□ -0.81
SOX9-AS1-212ENST00000533232 FTSJ3Q8IY81 847 aaKnown RBP9.97□□□□□ -0.81
SOX9-AS1-212ENST00000533232 ZNF428Q96B54 188 aa9.97□□□□□ -0.81
SOX9-AS1-212ENST00000533232 CHMP4BQ9H444 224 aaKnown RBP9.97□□□□□ -0.81
SOX9-AS1-212ENST00000533232 AGLP35573 1532 aa9.97□□□□□ -0.81
SOX9-AS1-212ENST00000533232 MYO5BQ9ULV0 1848 aa9.97□□□□□ -0.81
SOX9-AS1-212ENST00000533232 IPO8O15397 1037 aaKnown RBP9.96□□□□□ -0.81
SOX9-AS1-212ENST00000533232 DIAPH1O60610 1272 aaKnown RBP9.96□□□□□ -0.81
SOX9-AS1-212ENST00000533232 MVPQ14764 893 aaKnown RBP9.96□□□□□ -0.81
SOX9-AS1-212ENST00000533232 STK26Q9P289 416 aa9.96□□□□□ -0.81
SOX9-AS1-212ENST00000533232 LAS1LQ9Y4W2 734 aaKnown RBP9.96□□□□□ -0.81
SOX9-AS1-212ENST00000533232 ALKQ9UM73 1620 aa9.96□□□□□ -0.81
SOX9-AS1-212ENST00000533232 YEATS2Q9ULM3 1422 aa9.96□□□□□ -0.82
SOX9-AS1-212ENST00000533232 U2SURPO15042 1029 aaKnown RBP9.96□□□□□ -0.82
SOX9-AS1-212ENST00000533232 TMPOP42166 694 aaKnown RBP9.96□□□□□ -0.82
SOX9-AS1-212ENST00000533232 CALD1Q05682 793 aaKnown RBP9.96□□□□□ -0.82
SOX9-AS1-212ENST00000533232 NUTM2DQ5VT03 806 aaPredicted RBP9.96□□□□□ -0.82
SOX9-AS1-212ENST00000533232 DZIP1LQ8IYY4 767 aaKnown RBP9.96□□□□□ -0.82
SOX9-AS1-212ENST00000533232 PRAM1Q96QH2 718 aa9.96□□□□□ -0.82
SOX9-AS1-212ENST00000533232 KIF20BQ96Q89 1820 aa9.95□□□□□ -0.82
SOX9-AS1-212ENST00000533232 FYB1O15117 783 aa9.95□□□□□ -0.82
SOX9-AS1-212ENST00000533232 FCHSD2O94868 740 aa9.95□□□□□ -0.82
SOX9-AS1-212ENST00000533232 SKAP1Q86WV1 359 aa9.95□□□□□ -0.82
SOX9-AS1-212ENST00000533232 PLEKHF1Q96S99 279 aa9.95□□□□□ -0.82
SOX9-AS1-212ENST00000533232 DDX19BQ9UMR2 479 aa9.95□□□□□ -0.82
SOX9-AS1-212ENST00000533232 COL3A1P02461 1466 aaPredicted RBP9.95□□□□□ -0.82
SOX9-AS1-212ENST00000533232 ATP7BP35670 1465 aa9.95□□□□□ -0.82
SOX9-AS1-212ENST00000533232 PNPLA6Q8IY17 1366 aa9.94□□□□□ -0.82
SOX9-AS1-212ENST00000533232 KIF16BQ96L93 1317 aa9.94□□□□□ -0.82
SOX9-AS1-212ENST00000533232 HDGFP51858 240 aaKnown RBP9.94□□□□□ -0.82
SOX9-AS1-212ENST00000533232 SAFB2Q14151 953 aaKnown RBP eCLIP9.94□□□□□ -0.82
SOX9-AS1-212ENST00000533232 CDC42BPGQ6DT37 1551 aa9.94□□□□□ -0.82
SOX9-AS1-212ENST00000533232 MINK1Q8N4C8 1332 aaPredicted RBP9.94□□□□□ -0.82
SOX9-AS1-212ENST00000533232 ALDH1L2Q3SY69 923 aa9.93□□□□□ -0.82
SOX9-AS1-212ENST00000533232 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.93□□□□□ -0.82
SOX9-AS1-212ENST00000533232 CDK19Q9BWU1 502 aa9.93□□□□□ -0.82
SOX9-AS1-212ENST00000533232 GGNBP2Q9H3C7 697 aa9.93□□□□□ -0.82
SOX9-AS1-212ENST00000533232 SMC4Q9NTJ3 1288 aa9.93□□□□□ -0.82
SOX9-AS1-212ENST00000533232 ARHGEF40Q8TER5 1519 aa9.93□□□□□ -0.82
SOX9-AS1-212ENST00000533232 NLRP1Q9C000 1473 aa9.92□□□□□ -0.82
SOX9-AS1-212ENST00000533232 CD163L1Q9NR16 1453 aa9.92□□□□□ -0.82
SOX9-AS1-212ENST00000533232 SPATA31D1Q6ZQQ2 1576 aa9.92□□□□□ -0.82
SOX9-AS1-212ENST00000533232 RIPK4P57078 832 aa9.92□□□□□ -0.82
SOX9-AS1-212ENST00000533232 HDAC1Q13547 482 aaPredicted RBP9.92□□□□□ -0.82
SOX9-AS1-212ENST00000533232 NFKBIBQ15653 356 aa9.92□□□□□ -0.82
SOX9-AS1-212ENST00000533232 ATF7IPQ6VMQ6 1270 aa9.92□□□□□ -0.82
SOX9-AS1-212ENST00000533232 EXOSC9Q06265 439 aaKnown RBP9.91□□□□□ -0.82
SOX9-AS1-212ENST00000533232 SIRT1Q96EB6 747 aa9.91□□□□□ -0.82
SOX9-AS1-212ENST00000533232 PDZRN3Q9UPQ7 1066 aa9.91□□□□□ -0.82
SOX9-AS1-212ENST00000533232 PCDHB15Q9Y5E8 787 aa9.91□□□□□ -0.82
SOX9-AS1-212ENST00000533232 RLBP1P12271 317 aa9.9□□□□□ -0.82
SOX9-AS1-212ENST00000533232 BRPF1P55201 1214 aaPredicted RBP9.9□□□□□ -0.82
SOX9-AS1-212ENST00000533232 EIF5BO60841 1220 aaKnown RBP9.9□□□□□ -0.83
SOX9-AS1-212ENST00000533232 PBX2P40425 430 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms