RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.51■□□□□ 0.55
PCDHA3-202ENST00000532566 BECN2A8MW95 431 aa18.5■□□□□ 0.55
PCDHA3-202ENST00000532566 K7ELQ4 463 aaPredicted RBP18.5■□□□□ 0.55
PCDHA3-202ENST00000532566 ABCC2Q92887 1545 aa18.5■□□□□ 0.55
PCDHA3-202ENST00000532566 PSMA5P28066 241 aa18.5■□□□□ 0.55
PCDHA3-202ENST00000532566 ABCC10Q5T3U5 1492 aa18.5■□□□□ 0.55
PCDHA3-202ENST00000532566 BICD2Q8TD16 824 aa18.49■□□□□ 0.55
PCDHA3-202ENST00000532566 IL16Q14005 1332 aa18.49■□□□□ 0.55
PCDHA3-202ENST00000532566 RSPH6AQ9H0K4 717 aa18.49■□□□□ 0.55
PCDHA3-202ENST00000532566 HIP1O00291 1037 aa18.49■□□□□ 0.55
PCDHA3-202ENST00000532566 MIS18AQ9NYP9 233 aa18.49■□□□□ 0.55
PCDHA3-202ENST00000532566 AMOTL2Q9Y2J4 779 aa18.49■□□□□ 0.55
PCDHA3-202ENST00000532566 POLR3AO14802 1390 aaPredicted RBP18.48■□□□□ 0.55
PCDHA3-202ENST00000532566 RASSF8Q8NHQ8 419 aa18.48■□□□□ 0.55
PCDHA3-202ENST00000532566 FYB1O15117 783 aa18.48■□□□□ 0.55
PCDHA3-202ENST00000532566 AKAP17AQ02040 695 aaKnown RBP18.48■□□□□ 0.55
PCDHA3-202ENST00000532566 COL17A1Q9UMD9 1497 aaPredicted RBP18.48■□□□□ 0.55
PCDHA3-202ENST00000532566 SRGAP3O43295 1099 aa18.47■□□□□ 0.55
PCDHA3-202ENST00000532566 KCNH5Q8NCM2 988 aa18.47■□□□□ 0.55
PCDHA3-202ENST00000532566 PUS7Q96PZ0 661 aaKnown RBP18.47■□□□□ 0.55
PCDHA3-202ENST00000532566 PIK3C2GO75747 1445 aa18.46■□□□□ 0.55
PCDHA3-202ENST00000532566 MBD3O95983 291 aa18.46■□□□□ 0.55
PCDHA3-202ENST00000532566 CWC22Q9HCG8 908 aaKnown RBP18.46■□□□□ 0.55
PCDHA3-202ENST00000532566 CIZ1Q9ULV3 898 aaPredicted RBP18.46■□□□□ 0.55
PCDHA3-202ENST00000532566 GCC2Q8IWJ2 1684 aa18.45■□□□□ 0.54
PCDHA3-202ENST00000532566 BTBD11A6QL63 1104 aa18.45■□□□□ 0.54
PCDHA3-202ENST00000532566 TRIM29Q14134 588 aa18.45■□□□□ 0.54
PCDHA3-202ENST00000532566 TARBP1Q13395 1621 aaKnown RBP18.45■□□□□ 0.54
PCDHA3-202ENST00000532566 WASHC4Q2M389 1173 aa18.45■□□□□ 0.54
PCDHA3-202ENST00000532566 SPG7Q9UQ90 795 aa18.45■□□□□ 0.54
PCDHA3-202ENST00000532566 RALYLQ86SE5 291 aaKnown RBP18.45■□□□□ 0.54
PCDHA3-202ENST00000532566 EXOC6BQ9Y2D4 811 aa18.45■□□□□ 0.54
PCDHA3-202ENST00000532566 IGHDP01880 384 aa18.44■□□□□ 0.54
PCDHA3-202ENST00000532566 NASPP49321 788 aaPredicted RBP18.44■□□□□ 0.54
PCDHA3-202ENST00000532566 CCDC27Q2M243 656 aa18.44■□□□□ 0.54
PCDHA3-202ENST00000532566 CAVIN1Q6NZI2 390 aaKnown RBP18.44■□□□□ 0.54
PCDHA3-202ENST00000532566 IL1RAPL2Q9NP60 686 aa18.44■□□□□ 0.54
PCDHA3-202ENST00000532566 CARD14Q9BXL6 1004 aa18.43■□□□□ 0.54
PCDHA3-202ENST00000532566 MCM4P33991 863 aa18.43■□□□□ 0.54
PCDHA3-202ENST00000532566 CEBPAP49715 358 aaPredicted RBP18.43■□□□□ 0.54
PCDHA3-202ENST00000532566 TTC21BQ7Z4L5 1316 aa18.43■□□□□ 0.54
PCDHA3-202ENST00000532566 XPCQ01831 940 aaPredicted RBP18.42■□□□□ 0.54
PCDHA3-202ENST00000532566 PRPF40AO75400 957 aaKnown RBP18.42■□□□□ 0.54
PCDHA3-202ENST00000532566 DNAJC2Q99543 621 aaKnown RBP18.42■□□□□ 0.54
PCDHA3-202ENST00000532566 PDCP20941 246 aa18.42■□□□□ 0.54
PCDHA3-202ENST00000532566 CABP4P57796 275 aa18.42■□□□□ 0.54
PCDHA3-202ENST00000532566 TAF7Q15545 349 aaPredicted RBP18.42■□□□□ 0.54
PCDHA3-202ENST00000532566 PLEKHH1Q9ULM0 1364 aa18.42■□□□□ 0.54
PCDHA3-202ENST00000532566 ARID3AQ99856 593 aa18.42■□□□□ 0.54
PCDHA3-202ENST00000532566 G3V3G9 751 aa18.41■□□□□ 0.54
PCDHA3-202ENST00000532566 DCAF8Q5TAQ9 597 aa18.41■□□□□ 0.54
PCDHA3-202ENST00000532566 PHF8Q9UPP1 1060 aa18.41■□□□□ 0.54
PCDHA3-202ENST00000532566 VPS37DQ86XT2 251 aa18.4■□□□□ 0.54
PCDHA3-202ENST00000532566 SIL1Q9H173 461 aa18.4■□□□□ 0.54
PCDHA3-202ENST00000532566 MBIPQ9NS73 344 aa18.4■□□□□ 0.54
PCDHA3-202ENST00000532566 ACEP12821 1306 aa18.4■□□□□ 0.54
PCDHA3-202ENST00000532566 FBLN1P23142 703 aa18.4■□□□□ 0.54
PCDHA3-202ENST00000532566 CCDC73Q6ZRK6 1079 aa18.4■□□□□ 0.54
PCDHA3-202ENST00000532566 CEP170Q5SW79 1584 aa18.4■□□□□ 0.54
PCDHA3-202ENST00000532566 MYL6BP14649 208 aa18.4■□□□□ 0.54
PCDHA3-202ENST00000532566 ZC3H6P61129 1189 aaKnown RBP18.4■□□□□ 0.54
PCDHA3-202ENST00000532566 NFXL1Q6ZNB6 911 aa18.39■□□□□ 0.53
PCDHA3-202ENST00000532566 BRPF3Q9ULD4 1205 aa18.39■□□□□ 0.53
PCDHA3-202ENST00000532566 TOM1L2Q6ZVM7 507 aa18.39■□□□□ 0.53
PCDHA3-202ENST00000532566 STRN4Q9NRL3 753 aa18.39■□□□□ 0.53
PCDHA3-202ENST00000532566 CYP46A1Q9Y6A2 500 aa18.39■□□□□ 0.53
PCDHA3-202ENST00000532566 MAST1Q9Y2H9 1570 aa18.39■□□□□ 0.53
PCDHA3-202ENST00000532566 SASS6Q6UVJ0 657 aa18.39■□□□□ 0.53
PCDHA3-202ENST00000532566 PTPRCP08575 1304 aa18.38■□□□□ 0.53
PCDHA3-202ENST00000532566 TNRQ92752 1358 aa18.38■□□□□ 0.53
PCDHA3-202ENST00000532566 RNF214Q8ND24 703 aa18.38■□□□□ 0.53
PCDHA3-202ENST00000532566 F6X3S4 739 aa18.38■□□□□ 0.53
PCDHA3-202ENST00000532566 MAP4K4O95819 1239 aaPredicted RBP18.38■□□□□ 0.53
PCDHA3-202ENST00000532566 PRDM11Q9NQV5 511 aa18.38■□□□□ 0.53
PCDHA3-202ENST00000532566 PCDHB15Q9Y5E8 787 aa18.37■□□□□ 0.53
PCDHA3-202ENST00000532566 NPC1L1Q9UHC9 1359 aa18.37■□□□□ 0.53
PCDHA3-202ENST00000532566 UHRF1BP1LA0JNW5 1464 aa18.37■□□□□ 0.53
PCDHA3-202ENST00000532566 FAM83GA6ND36 823 aa18.37■□□□□ 0.53
PCDHA3-202ENST00000532566 FOSBP53539 338 aa18.37■□□□□ 0.53
PCDHA3-202ENST00000532566 AACSQ86V21 672 aa18.37■□□□□ 0.53
PCDHA3-202ENST00000532566 CREBRFQ8IUR6 639 aa18.37■□□□□ 0.53
PCDHA3-202ENST00000532566 FAM43AQ8N2R8 423 aa18.37■□□□□ 0.53
PCDHA3-202ENST00000532566 MX1P20591 662 aa18.37■□□□□ 0.53
PCDHA3-202ENST00000532566 SMARCA5O60264 1052 aaPredicted RBP18.37■□□□□ 0.53
PCDHA3-202ENST00000532566 KIF6Q6ZMV9 814 aa18.37■□□□□ 0.53
PCDHA3-202ENST00000532566 KIF1BPQ96EK5 621 aa18.37■□□□□ 0.53
PCDHA3-202ENST00000532566 ARHGAP45Q92619 1136 aa18.36■□□□□ 0.53
PCDHA3-202ENST00000532566 ERICH2A1L162 156 aa18.36■□□□□ 0.53
PCDHA3-202ENST00000532566 USHBP1Q8N6Y0 703 aa18.36■□□□□ 0.53
PCDHA3-202ENST00000532566 RBM42Q9BTD8 480 aaKnown RBP18.36■□□□□ 0.53
PCDHA3-202ENST00000532566 SPATA31E1Q6ZUB1 1445 aa18.36■□□□□ 0.53
PCDHA3-202ENST00000532566 WDR33Q9C0J8 1336 aaKnown RBP18.36■□□□□ 0.53
PCDHA3-202ENST00000532566 HDAC1Q13547 482 aaPredicted RBP18.35■□□□□ 0.53
PCDHA3-202ENST00000532566 AMOTQ4VCS5 1084 aa18.35■□□□□ 0.53
PCDHA3-202ENST00000532566 BMP2KLQ5H9B9 411 aa18.35■□□□□ 0.53
PCDHA3-202ENST00000532566 NOL10Q9BSC4 688 aaKnown RBP18.35■□□□□ 0.53
PCDHA3-202ENST00000532566 TBC1D2Q9BYX2 928 aa18.35■□□□□ 0.53
PCDHA3-202ENST00000532566 FIBPO43427 364 aa18.35■□□□□ 0.53
PCDHA3-202ENST00000532566 AMOTL1Q8IY63 956 aa18.35■□□□□ 0.53
PCDHA3-202ENST00000532566 DDX54Q8TDD1 881 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms