RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 NUDT16Q96DE0 195 aaKnown RBP8.14□□□□□ -1.11
HMGB1P42-201ENST00000532126 NHSL1Q5SYE7 1610 aa8.14□□□□□ -1.11
HMGB1P42-201ENST00000532126 TULP4Q9NRJ4 1543 aa8.13□□□□□ -1.11
HMGB1P42-201ENST00000532126 PNPLA6Q8IY17 1366 aa8.13□□□□□ -1.11
HMGB1P42-201ENST00000532126 MEX3CQ5U5Q3 659 aaKnown RBP8.13□□□□□ -1.11
HMGB1P42-201ENST00000532126 NECTIN2Q92692 538 aa8.13□□□□□ -1.11
HMGB1P42-201ENST00000532126 FARP1Q9Y4F1 1045 aaPredicted RBP8.13□□□□□ -1.11
HMGB1P42-201ENST00000532126 CCDC61Q9Y6R9 512 aa8.13□□□□□ -1.11
HMGB1P42-201ENST00000532126 PXDNQ92626 1479 aa8.13□□□□□ -1.11
HMGB1P42-201ENST00000532126 KIF1AQ12756 1690 aa8.12□□□□□ -1.11
HMGB1P42-201ENST00000532126 EVC2Q86UK5 1308 aa8.12□□□□□ -1.11
HMGB1P42-201ENST00000532126 MKRN3Q13064 507 aaKnown RBP8.12□□□□□ -1.11
HMGB1P42-201ENST00000532126 POTEHQ6S545 545 aa8.12□□□□□ -1.11
HMGB1P42-201ENST00000532126 NGDNQ8NEJ9 315 aaKnown RBP8.12□□□□□ -1.11
HMGB1P42-201ENST00000532126 CABP2Q9NPB3 220 aa8.12□□□□□ -1.11
HMGB1P42-201ENST00000532126 SPATA31A3Q5VYP0 1347 aa8.11□□□□□ -1.11
HMGB1P42-201ENST00000532126 SOX12O15370 315 aa8.11□□□□□ -1.11
HMGB1P42-201ENST00000532126 EFCAB3Q8N7B9 438 aa8.11□□□□□ -1.11
HMGB1P42-201ENST00000532126 ATP7BP35670 1465 aa8.11□□□□□ -1.11
HMGB1P42-201ENST00000532126 SHPRHQ149N8 1683 aa8.11□□□□□ -1.11
HMGB1P42-201ENST00000532126 USP32Q8NFA0 1604 aa8.11□□□□□ -1.11
HMGB1P42-201ENST00000532126 SBNO1A3KN83 1393 aa8.1□□□□□ -1.11
HMGB1P42-201ENST00000532126 PLEKHG3A1L390 1219 aa8.1□□□□□ -1.11
HMGB1P42-201ENST00000532126 FBXO22Q8NEZ5 403 aa8.1□□□□□ -1.11
HMGB1P42-201ENST00000532126 TRAIPQ9BWF2 469 aa8.1□□□□□ -1.11
HMGB1P42-201ENST00000532126 LRP6O75581 1613 aa8.1□□□□□ -1.11
HMGB1P42-201ENST00000532126 SBNO2Q9Y2G9 1366 aa8.1□□□□□ -1.11
HMGB1P42-201ENST00000532126 QRICH2Q9H0J4 1663 aa8.09□□□□□ -1.11
HMGB1P42-201ENST00000532126 ST20-MTHFSA0A0A6YYL1 179 aa8.09□□□□□ -1.11
HMGB1P42-201ENST00000532126 PAK3O75914 559 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P42-201ENST00000532126 ADAMTS2O95450 1211 aa8.09□□□□□ -1.11
HMGB1P42-201ENST00000532126 HMGB1P09429 215 aaKnown RBP8.09□□□□□ -1.11
HMGB1P42-201ENST00000532126 RGS17Q9UGC6 210 aaPredicted RBP8.09□□□□□ -1.11
HMGB1P42-201ENST00000532126 TNS3Q68CZ2 1445 aa8.09□□□□□ -1.11
HMGB1P42-201ENST00000532126 PPIP5K1Q6PFW1 1433 aa8.09□□□□□ -1.11
HMGB1P42-201ENST00000532126 ARHGEF10O15013 1369 aa8.09□□□□□ -1.12
HMGB1P42-201ENST00000532126 ACEP12821 1306 aa8.08□□□□□ -1.12
HMGB1P42-201ENST00000532126 A6NJR5 290 aa8.08□□□□□ -1.12
HMGB1P42-201ENST00000532126 RAD21O60216 631 aa8.08□□□□□ -1.12
HMGB1P42-201ENST00000532126 CCDC82Q8N4S0 544 aa8.08□□□□□ -1.12
HMGB1P42-201ENST00000532126 C8orf37Q96NL8 207 aa8.08□□□□□ -1.12
HMGB1P42-201ENST00000532126 CABP1Q9NZU7 370 aa8.08□□□□□ -1.12
HMGB1P42-201ENST00000532126 POLR3AO14802 1390 aaPredicted RBP8.08□□□□□ -1.12
HMGB1P42-201ENST00000532126 USP47Q96K76 1375 aa8.08□□□□□ -1.12
HMGB1P42-201ENST00000532126 RGPD8O14715 1765 aaPredicted RBP8.07□□□□□ -1.12
HMGB1P42-201ENST00000532126 PDE4AP27815 886 aa8.07□□□□□ -1.12
HMGB1P42-201ENST00000532126 PDE4DQ08499 809 aa8.07□□□□□ -1.12
HMGB1P42-201ENST00000532126 ZNF772Q68DY9 489 aaPredicted RBP8.07□□□□□ -1.12
HMGB1P42-201ENST00000532126 ILDR2Q71H61 639 aa8.07□□□□□ -1.12
HMGB1P42-201ENST00000532126 IFNL1Q8IU54 200 aa8.07□□□□□ -1.12
HMGB1P42-201ENST00000532126 NGLY1Q96IV0 654 aa8.07□□□□□ -1.12
HMGB1P42-201ENST00000532126 ATAD2Q6PL18 1390 aa8.07□□□□□ -1.12
HMGB1P42-201ENST00000532126 GPIHBP1Q8IV16 184 aa8.06□□□□□ -1.12
HMGB1P42-201ENST00000532126 CABLES1Q8TDN4 633 aa8.06□□□□□ -1.12
HMGB1P42-201ENST00000532126 TESK2Q96S53 571 aa8.06□□□□□ -1.12
HMGB1P42-201ENST00000532126 LARP6Q9BRS8 491 aaKnown RBP8.06□□□□□ -1.12
HMGB1P42-201ENST00000532126 COL22A1Q8NFW1 1626 aaPredicted RBP8.06□□□□□ -1.12
HMGB1P42-201ENST00000532126 ITSN1Q15811 1721 aa8.06□□□□□ -1.12
HMGB1P42-201ENST00000532126 AFF2P51816 1311 aa8.05□□□□□ -1.12
HMGB1P42-201ENST00000532126 ZNF316A6NFI3 1004 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P42-201ENST00000532126 POTEAQ6S8J7 498 aa8.05□□□□□ -1.12
HMGB1P42-201ENST00000532126 TMC1Q8TDI8 760 aa8.05□□□□□ -1.12
HMGB1P42-201ENST00000532126 DDRGK1Q96HY6 314 aa8.05□□□□□ -1.12
HMGB1P42-201ENST00000532126 PUS7Q96PZ0 661 aaKnown RBP8.05□□□□□ -1.12
HMGB1P42-201ENST00000532126 TOPAZ1Q8N9V7 1692 aa8.05□□□□□ -1.12
HMGB1P42-201ENST00000532126 TRIM66O15016 1216 aa8.04□□□□□ -1.12
HMGB1P42-201ENST00000532126 TRAK2O60296 914 aa8.04□□□□□ -1.12
HMGB1P42-201ENST00000532126 TMF1P82094 1093 aa8.04□□□□□ -1.12
HMGB1P42-201ENST00000532126 NUTM2GQ5VZR2 741 aa8.04□□□□□ -1.12
HMGB1P42-201ENST00000532126 FNBP4Q8N3X1 1017 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P42-201ENST00000532126 ABTB2Q8N961 1025 aa8.04□□□□□ -1.12
HMGB1P42-201ENST00000532126 USP21Q9UK80 565 aa8.04□□□□□ -1.12
HMGB1P42-201ENST00000532126 BRD4O60885 1362 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P42-201ENST00000532126 USP6P35125 1406 aa8.03□□□□□ -1.12
HMGB1P42-201ENST00000532126 EIF4G2P78344 907 aaKnown RBP eCLIP8.03□□□□□ -1.12
HMGB1P42-201ENST00000532126 CDCA8Q53HL2 280 aa8.03□□□□□ -1.12
HMGB1P42-201ENST00000532126 SLC12A5Q9H2X9 1139 aa8.03□□□□□ -1.12
HMGB1P42-201ENST00000532126 TRPM3Q9HCF6 1732 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P42-201ENST00000532126 KTN1Q86UP2 1357 aaKnown RBP8.02□□□□□ -1.13
HMGB1P42-201ENST00000532126 MAP3K13O43283 966 aa8.02□□□□□ -1.13
HMGB1P42-201ENST00000532126 PRKAR2AP13861 404 aaKnown RBP8.02□□□□□ -1.13
HMGB1P42-201ENST00000532126 RXRBP28702 533 aa8.02□□□□□ -1.13
HMGB1P42-201ENST00000532126 MFSD10Q14728 455 aa8.02□□□□□ -1.13
HMGB1P42-201ENST00000532126 TMCO4Q5TGY1 634 aa8.02□□□□□ -1.13
HMGB1P42-201ENST00000532126 HDGFL2Q7Z4V5 671 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P42-201ENST00000532126 NLRP13Q86W25 1043 aa8.02□□□□□ -1.13
HMGB1P42-201ENST00000532126 QTRT2Q9H974 415 aaKnown RBP8.02□□□□□ -1.13
HMGB1P42-201ENST00000532126 TERF2IPQ9NYB0 399 aa8.02□□□□□ -1.13
HMGB1P42-201ENST00000532126 TRPC5Q9UL62 973 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P42-201ENST00000532126 ARIH1Q9Y4X5 557 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P42-201ENST00000532126 CPSF1Q10570 1443 aaKnown RBP8.02□□□□□ -1.13
HMGB1P42-201ENST00000532126 NINLQ9Y2I6 1382 aa8.01□□□□□ -1.13
HMGB1P42-201ENST00000532126 FAM83GA6ND36 823 aa8.01□□□□□ -1.13
HMGB1P42-201ENST00000532126 DDX27Q96GQ7 796 aaKnown RBP8.01□□□□□ -1.13
HMGB1P42-201ENST00000532126 SSH2Q76I76 1423 aa8.01□□□□□ -1.13
HMGB1P42-201ENST00000532126 ALS2Q96Q42 1657 aa8.01□□□□□ -1.13
HMGB1P42-201ENST00000532126 TTC21BQ7Z4L5 1316 aa8.01□□□□□ -1.13
HMGB1P42-201ENST00000532126 TTC21AQ8NDW8 1320 aa8.01□□□□□ -1.13
HMGB1P42-201ENST00000532126 SOCS7O14512 581 aa8□□□□□ -1.13
HMGB1P42-201ENST00000532126 HSPA5P11021 654 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms