RNA–Protein interactions for RNA: ENST00000532001.6

PTP4A2-213, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5

Gene PTP4A2, Length 911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-213ENST00000532001 SBNO1A3KN83 1393 aa12.63□□□□□ -0.39
PTP4A2-213ENST00000532001 EIF3AQ14152 1382 aaKnown RBP12.63□□□□□ -0.39
PTP4A2-213ENST00000532001 BCL9LQ86UU0 1499 aa12.63□□□□□ -0.39
PTP4A2-213ENST00000532001 TRPM3Q9HCF6 1732 aaPredicted RBP12.62□□□□□ -0.39
PTP4A2-213ENST00000532001 C3orf67Q6ZVT6 689 aa12.62□□□□□ -0.39
PTP4A2-213ENST00000532001 USP21Q9UK80 565 aa12.62□□□□□ -0.39
PTP4A2-213ENST00000532001 NWD2Q9ULI1 1742 aa12.62□□□□□ -0.39
PTP4A2-213ENST00000532001 SLIT2O94813 1529 aa12.62□□□□□ -0.39
PTP4A2-213ENST00000532001 TULP4Q9NRJ4 1543 aa12.62□□□□□ -0.39
PTP4A2-213ENST00000532001 NUTM2FA1L443 756 aa12.61□□□□□ -0.39
PTP4A2-213ENST00000532001 XPCQ01831 940 aaPredicted RBP12.61□□□□□ -0.39
PTP4A2-213ENST00000532001 PHF8Q9UPP1 1060 aa12.61□□□□□ -0.39
PTP4A2-213ENST00000532001 BOLA1Q9Y3E2 137 aa12.61□□□□□ -0.39
PTP4A2-213ENST00000532001 ITSN1Q15811 1721 aa12.61□□□□□ -0.39
PTP4A2-213ENST00000532001 ALS2Q96Q42 1657 aa12.61□□□□□ -0.39
PTP4A2-213ENST00000532001 POTEGQ6S5H5 508 aa12.6□□□□□ -0.39
PTP4A2-213ENST00000532001 PLCH1Q4KWH8 1693 aa12.6□□□□□ -0.39
PTP4A2-213ENST00000532001 ARHGEF10O15013 1369 aa12.59□□□□□ -0.39
PTP4A2-213ENST00000532001 KRT28Q7Z3Y7 464 aa12.59□□□□□ -0.39
PTP4A2-213ENST00000532001 DCAF11Q8TEB1 546 aa12.59□□□□□ -0.39
PTP4A2-213ENST00000532001 MS4A4AQ96JQ5 239 aa12.59□□□□□ -0.39
PTP4A2-213ENST00000532001 POGKQ9P215 609 aa12.59□□□□□ -0.39
PTP4A2-213ENST00000532001 ATAD2Q6PL18 1390 aa12.58□□□□□ -0.4
PTP4A2-213ENST00000532001 PSME1Q06323 249 aa12.58□□□□□ -0.4
PTP4A2-213ENST00000532001 CRYBG1Q9Y4K1 1723 aa12.57□□□□□ -0.4
PTP4A2-213ENST00000532001 GLI3P10071 1580 aa12.57□□□□□ -0.4
PTP4A2-213ENST00000532001 G3V3G9 751 aa12.57□□□□□ -0.4
PTP4A2-213ENST00000532001 SAFB2Q14151 953 aaKnown RBP eCLIP12.57□□□□□ -0.4
PTP4A2-213ENST00000532001 LCE2DQ5TA82 110 aaPredicted RBP12.57□□□□□ -0.4
PTP4A2-213ENST00000532001 TMEM121BQ9BXQ6 578 aaPredicted RBP12.57□□□□□ -0.4
PTP4A2-213ENST00000532001 TOPAZ1Q8N9V7 1692 aa12.57□□□□□ -0.4
PTP4A2-213ENST00000532001 EP400Q96L91 3159 aa12.56□□□□□ -0.4
PTP4A2-213ENST00000532001 TRAK1Q9UPV9 953 aa12.56□□□□□ -0.4
PTP4A2-213ENST00000532001 ATP7BP35670 1465 aa12.56□□□□□ -0.4
PTP4A2-213ENST00000532001 RALGAPBQ86X10 1494 aa12.55□□□□□ -0.4
PTP4A2-213ENST00000532001 NRAPQ86VF7 1730 aa12.55□□□□□ -0.4
PTP4A2-213ENST00000532001 NLRP6P59044 892 aa12.55□□□□□ -0.4
PTP4A2-213ENST00000532001 FBXO22Q8NEZ5 403 aa12.55□□□□□ -0.4
PTP4A2-213ENST00000532001 PCDH10Q9P2E7 1040 aa12.55□□□□□ -0.4
PTP4A2-213ENST00000532001 KDM2AQ9Y2K7 1162 aa12.55□□□□□ -0.4
PTP4A2-213ENST00000532001 PRR36Q9H6K5 1346 aa12.55□□□□□ -0.4
PTP4A2-213ENST00000532001 WASLO00401 505 aaPredicted RBP12.54□□□□□ -0.4
PTP4A2-213ENST00000532001 UNC5CLQ8IV45 518 aa12.54□□□□□ -0.4
PTP4A2-213ENST00000532001 MFRPQ9BY79 579 aa12.54□□□□□ -0.4
PTP4A2-213ENST00000532001 MINK1Q8N4C8 1332 aaPredicted RBP12.54□□□□□ -0.4
PTP4A2-213ENST00000532001 COL14A1Q05707 1796 aaKnown RBP12.53□□□□□ -0.4
PTP4A2-213ENST00000532001 FAM163AQ96GL9 167 aaPredicted RBP12.53□□□□□ -0.4
PTP4A2-213ENST00000532001 GJD4Q96KN9 370 aaPredicted RBP12.53□□□□□ -0.4
PTP4A2-213ENST00000532001 GPRASP1Q5JY77 1395 aa12.53□□□□□ -0.4
PTP4A2-213ENST00000532001 BRWD3Q6RI45 1802 aa12.53□□□□□ -0.4
PTP4A2-213ENST00000532001 HIRIP3Q9BW71 556 aaPredicted RBP12.52□□□□□ -0.41
PTP4A2-213ENST00000532001 MICALL2Q8IY33 904 aa12.51□□□□□ -0.41
PTP4A2-213ENST00000532001 HS6ST3Q8IZP7 471 aa12.51□□□□□ -0.41
PTP4A2-213ENST00000532001 PMFBP1Q8TBY8 1022 aa12.51□□□□□ -0.41
PTP4A2-213ENST00000532001 VPS72Q15906 364 aa12.5□□□□□ -0.41
PTP4A2-213ENST00000532001 PHRF1Q9P1Y6 1649 aaKnown RBP12.5□□□□□ -0.41
PTP4A2-213ENST00000532001 POLR3AO14802 1390 aaPredicted RBP12.49□□□□□ -0.41
PTP4A2-213ENST00000532001 HAP1P54257 671 aaPredicted RBP12.49□□□□□ -0.41
PTP4A2-213ENST00000532001 CABLES1Q8TDN4 633 aa12.49□□□□□ -0.41
PTP4A2-213ENST00000532001 QRICH2Q9H0J4 1663 aa12.48□□□□□ -0.41
PTP4A2-213ENST00000532001 CCDC125Q86Z20 511 aa12.48□□□□□ -0.41
PTP4A2-213ENST00000532001 NUDT16Q96DE0 195 aaKnown RBP12.48□□□□□ -0.41
PTP4A2-213ENST00000532001 TRPM1Q7Z4N2 1603 aa12.48□□□□□ -0.41
PTP4A2-213ENST00000532001 SNPHO15079 494 aa12.47□□□□□ -0.41
PTP4A2-213ENST00000532001 ONECUT3O60422 494 aaPredicted RBP12.47□□□□□ -0.41
PTP4A2-213ENST00000532001 LMOD2Q6P5Q4 547 aa12.47□□□□□ -0.41
PTP4A2-213ENST00000532001 NGDNQ8NEJ9 315 aaKnown RBP12.47□□□□□ -0.41
PTP4A2-213ENST00000532001 PLEKHG3A1L390 1219 aa12.45□□□□□ -0.42
PTP4A2-213ENST00000532001 FAM83GA6ND36 823 aa12.45□□□□□ -0.42
PTP4A2-213ENST00000532001 CDK19Q9BWU1 502 aa12.45□□□□□ -0.42
PTP4A2-213ENST00000532001 BLMP54132 1417 aaPredicted RBP12.45□□□□□ -0.42
PTP4A2-213ENST00000532001 THSD7AQ9UPZ6 1657 aa12.45□□□□□ -0.42
PTP4A2-213ENST00000532001 NRKQ7Z2Y5 1582 aa12.44□□□□□ -0.42
PTP4A2-213ENST00000532001 NBPF1Q3BBV0 1214 aa12.44□□□□□ -0.42
PTP4A2-213ENST00000532001 BRD4O60885 1362 aaPredicted RBP12.43□□□□□ -0.42
PTP4A2-213ENST00000532001 CENPJQ9HC77 1338 aaPredicted RBP12.43□□□□□ -0.42
PTP4A2-213ENST00000532001 ST18O60284 1047 aa12.43□□□□□ -0.42
PTP4A2-213ENST00000532001 SEPT12Q8IYM1 358 aa12.43□□□□□ -0.42
PTP4A2-213ENST00000532001 ACEP12821 1306 aa12.42□□□□□ -0.42
PTP4A2-213ENST00000532001 BTG4Q9NY30 223 aa12.42□□□□□ -0.42
PTP4A2-213ENST00000532001 LMO7Q8WWI1 1683 aa12.42□□□□□ -0.42
PTP4A2-213ENST00000532001 L3MBTL2Q969R5 705 aa12.41□□□□□ -0.42
PTP4A2-213ENST00000532001 USP19O94966 1318 aa12.4□□□□□ -0.42
PTP4A2-213ENST00000532001 SPATA31A5Q5VU36 1347 aa12.4□□□□□ -0.42
PTP4A2-213ENST00000532001 SPATA31A7Q8IWB4 1347 aa12.4□□□□□ -0.42
PTP4A2-213ENST00000532001 RGPD1P0DJD0 1748 aa12.4□□□□□ -0.42
PTP4A2-213ENST00000532001 PPIP5K1Q6PFW1 1433 aa12.4□□□□□ -0.42
PTP4A2-213ENST00000532001 NBPF8Q3BBV2 869 aa12.4□□□□□ -0.42
PTP4A2-213ENST00000532001 PRDM11Q9NQV5 511 aa12.4□□□□□ -0.42
PTP4A2-213ENST00000532001 CPDO75976 1380 aa12.4□□□□□ -0.42
PTP4A2-213ENST00000532001 KIAA0232Q92628 1395 aa12.4□□□□□ -0.42
PTP4A2-213ENST00000532001 TMEM92Q6UXU6 159 aa12.39□□□□□ -0.43
PTP4A2-213ENST00000532001 KRT27Q7Z3Y8 459 aa12.39□□□□□ -0.43
PTP4A2-213ENST00000532001 CCDC9Q9Y3X0 531 aaKnown RBP12.39□□□□□ -0.43
PTP4A2-213ENST00000532001 AKAP12Q02952 1782 aa12.38□□□□□ -0.43
PTP4A2-213ENST00000532001 CLSPNQ9HAW4 1339 aa12.37□□□□□ -0.43
PTP4A2-213ENST00000532001 SRCAPQ6ZRS2 3230 aa12.37□□□□□ -0.43
PTP4A2-213ENST00000532001 USP6P35125 1406 aa12.37□□□□□ -0.43
PTP4A2-213ENST00000532001 SLIT3O75094 1523 aa12.37□□□□□ -0.43
PTP4A2-213ENST00000532001 TNS1Q9HBL0 1735 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms