RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 WNT7AO00755 349 aa6.65□□□□□ -1.34
ECHDC1-221ENST00000531582 RBM10P98175 930 aaKnown RBP6.65□□□□□ -1.34
ECHDC1-221ENST00000531582 RC3H1Q5TC82 1133 aaKnown RBP6.65□□□□□ -1.34
ECHDC1-221ENST00000531582 ZNF697Q5TEC3 545 aa6.65□□□□□ -1.34
ECHDC1-221ENST00000531582 DZIP3Q86Y13 1208 aaKnown RBP6.65□□□□□ -1.34
ECHDC1-221ENST00000531582 ADAM32Q8TC27 787 aa6.65□□□□□ -1.34
ECHDC1-221ENST00000531582 FOXJ1Q92949 421 aa6.65□□□□□ -1.34
ECHDC1-221ENST00000531582 SLC10A4Q96EP9 437 aa6.65□□□□□ -1.34
ECHDC1-221ENST00000531582 NAP1L5Q96NT1 182 aaPredicted RBP6.65□□□□□ -1.34
ECHDC1-221ENST00000531582 C1QTNF2Q9BXJ5 285 aa6.65□□□□□ -1.34
ECHDC1-221ENST00000531582 LOC105371045A0A1W2PR82 267 aa6.64□□□□□ -1.35
ECHDC1-221ENST00000531582 DEKP35659 375 aaKnown RBP6.64□□□□□ -1.35
ECHDC1-221ENST00000531582 SKOR1P84550 965 aa6.64□□□□□ -1.35
ECHDC1-221ENST00000531582 NBPF20Q3BBV1 942 aa6.64□□□□□ -1.35
ECHDC1-221ENST00000531582 RNF20Q5VTR2 975 aa6.64□□□□□ -1.35
ECHDC1-221ENST00000531582 MAP4K5Q9Y4K4 846 aa6.64□□□□□ -1.35
ECHDC1-221ENST00000531582 ERFEQ4G0M1 354 aa6.63□□□□□ -1.35
ECHDC1-221ENST00000531582 CALR3Q96L12 384 aaKnown RBP6.63□□□□□ -1.35
ECHDC1-221ENST00000531582 CARD14Q9BXL6 1004 aa6.63□□□□□ -1.35
ECHDC1-221ENST00000531582 ALG2Q9H553 416 aa6.63□□□□□ -1.35
ECHDC1-221ENST00000531582 SERPINA10Q9UK55 444 aa6.63□□□□□ -1.35
ECHDC1-221ENST00000531582 ZNF777Q9ULD5 760 aaPredicted RBP6.63□□□□□ -1.35
ECHDC1-221ENST00000531582 SHROOM4Q9ULL8 1493 aa6.63□□□□□ -1.35
ECHDC1-221ENST00000531582 PCDHB9Q9Y5E1 797 aa6.63□□□□□ -1.35
ECHDC1-221ENST00000531582 TRIM26Q12899 539 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-221ENST00000531582 HDGFL1Q5TGJ6 251 aa6.62□□□□□ -1.35
ECHDC1-221ENST00000531582 SEPT12Q8IYM1 358 aa6.62□□□□□ -1.35
ECHDC1-221ENST00000531582 EMID1Q96A84 441 aaPredicted RBP6.62□□□□□ -1.35
ECHDC1-221ENST00000531582 CCDC136Q96JN2 1154 aa6.62□□□□□ -1.35
ECHDC1-221ENST00000531582 CDK15Q96Q40 435 aa6.62□□□□□ -1.35
ECHDC1-221ENST00000531582 OCSTAMPQ9BR26 566 aa6.62□□□□□ -1.35
ECHDC1-221ENST00000531582 GLMNQ92990 594 aa6.61□□□□□ -1.35
ECHDC1-221ENST00000531582 CCDC97Q96F63 343 aaPredicted RBP6.61□□□□□ -1.35
ECHDC1-221ENST00000531582 FANCIQ9NVI1 1328 aa6.6□□□□□ -1.35
ECHDC1-221ENST00000531582 LZTS3O60299 673 aaPredicted RBP6.6□□□□□ -1.35
ECHDC1-221ENST00000531582 PRR20EP86478 221 aa6.6□□□□□ -1.35
ECHDC1-221ENST00000531582 PRR20CP86479 221 aa6.6□□□□□ -1.35
ECHDC1-221ENST00000531582 PRR20DP86480 221 aa6.6□□□□□ -1.35
ECHDC1-221ENST00000531582 PRR20BP86481 221 aa6.6□□□□□ -1.35
ECHDC1-221ENST00000531582 PRR20AP86496 221 aa6.6□□□□□ -1.35
ECHDC1-221ENST00000531582 SLFNL1Q499Z3 407 aa6.6□□□□□ -1.35
ECHDC1-221ENST00000531582 C4orf48Q5BLP8 95 aa6.6□□□□□ -1.35
ECHDC1-221ENST00000531582 VASH1Q7L8A9 365 aaPredicted RBP6.6□□□□□ -1.35
ECHDC1-221ENST00000531582 NFATC2IPQ8NCF5 419 aa6.6□□□□□ -1.35
ECHDC1-221ENST00000531582 SNIP1Q8TAD8 396 aaKnown RBP6.6□□□□□ -1.35
ECHDC1-221ENST00000531582 CEP126Q9P2H0 1117 aa6.6□□□□□ -1.35
ECHDC1-221ENST00000531582 POM121CA8CG34 1229 aa6.59□□□□□ -1.35
ECHDC1-221ENST00000531582 SIAH2O43255 324 aa6.59□□□□□ -1.35
ECHDC1-221ENST00000531582 DHX9Q08211 1270 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-221ENST00000531582 NR5A1Q13285 461 aa6.59□□□□□ -1.35
ECHDC1-221ENST00000531582 DHX37Q8IY37 1157 aaKnown RBP6.59□□□□□ -1.35
ECHDC1-221ENST00000531582 MRGPRX2Q96LB1 330 aa6.59□□□□□ -1.35
ECHDC1-221ENST00000531582 SUPT5HO00267 1087 aaKnown RBP6.58□□□□□ -1.36
ECHDC1-221ENST00000531582 GDF9O60383 454 aa6.58□□□□□ -1.36
ECHDC1-221ENST00000531582 FOXC1Q12948 553 aa6.58□□□□□ -1.36
ECHDC1-221ENST00000531582 MAP7D1Q3KQU3 841 aa6.58□□□□□ -1.36
ECHDC1-221ENST00000531582 CYP4X1Q8N118 509 aa6.58□□□□□ -1.36
ECHDC1-221ENST00000531582 CCER1Q8TC90 406 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-221ENST00000531582 KCTD15Q96SI1 283 aaPredicted RBP6.58□□□□□ -1.36
ECHDC1-221ENST00000531582 TTC24A2A3L6 582 aaPredicted RBP6.57□□□□□ -1.36
ECHDC1-221ENST00000531582 ESPNB1AK53 854 aa6.57□□□□□ -1.36
ECHDC1-221ENST00000531582 ADH1CP00326 375 aa6.57□□□□□ -1.36
ECHDC1-221ENST00000531582 ARID5BQ14865 1188 aa6.57□□□□□ -1.36
ECHDC1-221ENST00000531582 SIRT1Q96EB6 747 aa6.57□□□□□ -1.36
ECHDC1-221ENST00000531582 PKD2L1Q9P0L9 805 aa6.57□□□□□ -1.36
ECHDC1-221ENST00000531582 A0A0U1RQG5 324 aaPredicted RBP6.56□□□□□ -1.36
ECHDC1-221ENST00000531582 LAPTM4AQ15012 233 aa6.56□□□□□ -1.36
ECHDC1-221ENST00000531582 RNF135Q8IUD6 432 aa6.56□□□□□ -1.36
ECHDC1-221ENST00000531582 WASF2Q9Y6W5 498 aa6.56□□□□□ -1.36
ECHDC1-221ENST00000531582 ARID3CA6NKF2 412 aa6.55□□□□□ -1.36
ECHDC1-221ENST00000531582 ADAMTS19Q8TE59 1207 aa6.55□□□□□ -1.36
ECHDC1-221ENST00000531582 IPO4Q8TEX9 1081 aaKnown RBP6.55□□□□□ -1.36
ECHDC1-221ENST00000531582 MYO15BQ96JP2 1530 aa6.55□□□□□ -1.36
ECHDC1-221ENST00000531582 C11orf95C9JLR9 678 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-221ENST00000531582 ATP9BO43861 1147 aa6.54□□□□□ -1.36
ECHDC1-221ENST00000531582 GIGYF1O75420 1035 aaPredicted RBP6.54□□□□□ -1.36
ECHDC1-221ENST00000531582 ALDH1A1P00352 501 aa6.54□□□□□ -1.36
ECHDC1-221ENST00000531582 NCLP19338 710 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-221ENST00000531582 DIEXFQ68CQ4 756 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-221ENST00000531582 TEX2Q8IWB9 1127 aa6.54□□□□□ -1.36
ECHDC1-221ENST00000531582 PHTF2Q8N3S3 785 aa6.54□□□□□ -1.36
ECHDC1-221ENST00000531582 PPP1R12CQ9BZL4 782 aa6.54□□□□□ -1.36
ECHDC1-221ENST00000531582 ESF1Q9H501 851 aaKnown RBP6.54□□□□□ -1.36
ECHDC1-221ENST00000531582 TOR4AQ9NXH8 423 aa6.54□□□□□ -1.36
ECHDC1-221ENST00000531582 PGPEP1Q9NXJ5 209 aa6.54□□□□□ -1.36
ECHDC1-221ENST00000531582 CHIC2Q9UKJ5 165 aa6.54□□□□□ -1.36
ECHDC1-221ENST00000531582 SKIP12755 728 aa6.53□□□□□ -1.36
ECHDC1-221ENST00000531582 GRM5P41594 1212 aa6.53□□□□□ -1.36
ECHDC1-221ENST00000531582 USP4Q13107 963 aa6.53□□□□□ -1.36
ECHDC1-221ENST00000531582 CCDC116Q8IYX3 515 aa6.53□□□□□ -1.36
ECHDC1-221ENST00000531582 PDZRN3Q9UPQ7 1066 aa6.53□□□□□ -1.36
ECHDC1-221ENST00000531582 SUPT16HQ9Y5B9 1047 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-221ENST00000531582 EMILIN1Q9Y6C2 1016 aa6.53□□□□□ -1.36
ECHDC1-221ENST00000531582 TLL2Q9Y6L7 1015 aa6.53□□□□□ -1.36
ECHDC1-221ENST00000531582 FSHRP23945 695 aa6.52□□□□□ -1.37
ECHDC1-221ENST00000531582 EML3Q32P44 896 aa6.52□□□□□ -1.37
ECHDC1-221ENST00000531582 INTS6LQ5JSJ4 861 aaKnown RBP6.52□□□□□ -1.37
ECHDC1-221ENST00000531582 PLEKHM2Q8IWE5 1019 aa6.52□□□□□ -1.37
ECHDC1-221ENST00000531582 CCDC82Q8N4S0 544 aa6.52□□□□□ -1.37
ECHDC1-221ENST00000531582 PLPP7Q8NBV4 271 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms