RNA–Protein interactions for RNA: ENST00000531201.5

IFT46-208, Transcript of intraflagellar transport 46, humanhuman

TSL 2

Gene IFT46, Length 1,496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-208ENST00000531201 SKAP1Q86WV1 359 aa12.09□□□□□ -0.47
IFT46-208ENST00000531201 FRAT1Q92837 279 aaPredicted RBP12.09□□□□□ -0.47
IFT46-208ENST00000531201 RSPH6AQ9H0K4 717 aa12.09□□□□□ -0.47
IFT46-208ENST00000531201 POLKQ9UBT6 870 aa12.09□□□□□ -0.47
IFT46-208ENST00000531201 CALD1Q05682 793 aaKnown RBP12.08□□□□□ -0.47
IFT46-208ENST00000531201 MVPQ14764 893 aaKnown RBP12.08□□□□□ -0.47
IFT46-208ENST00000531201 KIF16BQ96L93 1317 aa12.08□□□□□ -0.48
IFT46-208ENST00000531201 NEFMP07197 916 aa12.08□□□□□ -0.48
IFT46-208ENST00000531201 RLBP1P12271 317 aa12.08□□□□□ -0.48
IFT46-208ENST00000531201 CLEC11AQ9Y240 323 aa12.08□□□□□ -0.48
IFT46-208ENST00000531201 CCDC61Q9Y6R9 512 aa12.08□□□□□ -0.48
IFT46-208ENST00000531201 FER1L4A9Z1Z3 1794 aa12.07□□□□□ -0.48
IFT46-208ENST00000531201 BRPF1P55201 1214 aaPredicted RBP12.07□□□□□ -0.48
IFT46-208ENST00000531201 RIPK4P57078 832 aa12.07□□□□□ -0.48
IFT46-208ENST00000531201 EXOSC9Q06265 439 aaKnown RBP12.07□□□□□ -0.48
IFT46-208ENST00000531201 ALDH1L2Q3SY69 923 aa12.07□□□□□ -0.48
IFT46-208ENST00000531201 DZIP1LQ8IYY4 767 aaKnown RBP12.07□□□□□ -0.48
IFT46-208ENST00000531201 NUDT16Q96DE0 195 aaKnown RBP12.07□□□□□ -0.48
IFT46-208ENST00000531201 ZNF692Q9BU19 519 aaPredicted RBP12.07□□□□□ -0.48
IFT46-208ENST00000531201 PTCH1Q13635 1447 aa12.07□□□□□ -0.48
IFT46-208ENST00000531201 DLG5Q8TDM6 1919 aa12.06□□□□□ -0.48
IFT46-208ENST00000531201 ROBO2Q9HCK4 1378 aa12.06□□□□□ -0.48
IFT46-208ENST00000531201 RWDD1Q9H446 243 aaPredicted RBP12.06□□□□□ -0.48
IFT46-208ENST00000531201 SMC4Q9NTJ3 1288 aa12.06□□□□□ -0.48
IFT46-208ENST00000531201 OVOS2A0A0J9YW53 1432 aa12.06□□□□□ -0.48
IFT46-208ENST00000531201 OVOS2Q6IE36 1432 aa12.06□□□□□ -0.48
IFT46-208ENST00000531201 RGPD1P0DJD0 1748 aa12.06□□□□□ -0.48
IFT46-208ENST00000531201 PRKAR2BP31323 418 aa12.05□□□□□ -0.48
IFT46-208ENST00000531201 IL13P35225 146 aa12.05□□□□□ -0.48
IFT46-208ENST00000531201 RGS3P49796 1198 aa12.05□□□□□ -0.48
IFT46-208ENST00000531201 NFE2L2Q16236 605 aa12.05□□□□□ -0.48
IFT46-208ENST00000531201 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.05□□□□□ -0.48
IFT46-208ENST00000531201 FTSJ3Q8IY81 847 aaKnown RBP12.05□□□□□ -0.48
IFT46-208ENST00000531201 XRN1Q8IZH2 1706 aaKnown RBP12.05□□□□□ -0.48
IFT46-208ENST00000531201 TSR2Q969E8 191 aaKnown RBP12.05□□□□□ -0.48
IFT46-208ENST00000531201 DDX19BQ9UMR2 479 aa12.05□□□□□ -0.48
IFT46-208ENST00000531201 PPM1GO15355 546 aaPredicted RBP12.04□□□□□ -0.48
IFT46-208ENST00000531201 LMOD3Q0VAK6 560 aa12.04□□□□□ -0.48
IFT46-208ENST00000531201 ATF7IPQ6VMQ6 1270 aa12.04□□□□□ -0.48
IFT46-208ENST00000531201 TXNDC2Q86VQ3 553 aa12.04□□□□□ -0.48
IFT46-208ENST00000531201 SSH1Q8WYL5 1049 aa12.04□□□□□ -0.48
IFT46-208ENST00000531201 COG3Q96JB2 828 aa12.04□□□□□ -0.48
IFT46-208ENST00000531201 BCL2L13Q9BXK5 485 aa12.04□□□□□ -0.48
IFT46-208ENST00000531201 USP35Q9P2H5 1018 aa12.04□□□□□ -0.48
IFT46-208ENST00000531201 PCDHB15Q9Y5E8 787 aa12.04□□□□□ -0.48
IFT46-208ENST00000531201 FMN2Q9NZ56 1722 aa12.04□□□□□ -0.48
IFT46-208ENST00000531201 PRR36Q9H6K5 1346 aa12.04□□□□□ -0.48
IFT46-208ENST00000531201 USP54Q70EL1 1684 aa12.03□□□□□ -0.48
IFT46-208ENST00000531201 IPO8O15397 1037 aaKnown RBP12.03□□□□□ -0.48
IFT46-208ENST00000531201 HDAC1Q13547 482 aaPredicted RBP12.03□□□□□ -0.48
IFT46-208ENST00000531201 TNNQ9UQP3 1299 aa12.03□□□□□ -0.48
IFT46-208ENST00000531201 USP6P35125 1406 aa12.03□□□□□ -0.48
IFT46-208ENST00000531201 ZBTB22O15209 634 aa12.02□□□□□ -0.48
IFT46-208ENST00000531201 TRIM27P14373 513 aa12.02□□□□□ -0.48
IFT46-208ENST00000531201 NME9Q86XW9 330 aa12.02□□□□□ -0.48
IFT46-208ENST00000531201 IFT57Q9NWB7 429 aa12.02□□□□□ -0.48
IFT46-208ENST00000531201 PIK3R4Q99570 1358 aa12.02□□□□□ -0.48
IFT46-208ENST00000531201 SSH2Q76I76 1423 aa12.02□□□□□ -0.49
IFT46-208ENST00000531201 PLEKHG3A1L390 1219 aa12.02□□□□□ -0.49
IFT46-208ENST00000531201 RTL5Q5HYW3 569 aaPredicted RBP12.02□□□□□ -0.49
IFT46-208ENST00000531201 USP31Q70CQ4 1352 aa12.02□□□□□ -0.49
IFT46-208ENST00000531201 PTPRUQ92729 1446 aa12.01□□□□□ -0.49
IFT46-208ENST00000531201 EMILIN1Q9Y6C2 1016 aa12.01□□□□□ -0.49
IFT46-208ENST00000531201 PEAK1Q9H792 1746 aa12.01□□□□□ -0.49
IFT46-208ENST00000531201 ZNF853P0CG23 659 aa12□□□□□ -0.49
IFT46-208ENST00000531201 ATXN8OSP0DMR3 200 aa12□□□□□ -0.49
IFT46-208ENST00000531201 GNAI1P63096 354 aa12□□□□□ -0.49
IFT46-208ENST00000531201 ARHGAP45Q92619 1136 aa12□□□□□ -0.49
IFT46-208ENST00000531201 CHMP4BQ9H444 224 aaKnown RBP12□□□□□ -0.49
IFT46-208ENST00000531201 PDZRN3Q9UPQ7 1066 aa12□□□□□ -0.49
IFT46-208ENST00000531201 TTC21BQ7Z4L5 1316 aa11.99□□□□□ -0.49
IFT46-208ENST00000531201 ANKARQ7Z5J8 1434 aa11.99□□□□□ -0.49
IFT46-208ENST00000531201 LTKP29376 864 aa11.98□□□□□ -0.49
IFT46-208ENST00000531201 NBR1Q14596 966 aa11.98□□□□□ -0.49
IFT46-208ENST00000531201 NOB1Q9ULX3 412 aaKnown RBP11.98□□□□□ -0.49
IFT46-208ENST00000531201 TBX22Q9Y458 520 aa11.98□□□□□ -0.49
IFT46-208ENST00000531201 EID1Q9Y6B2 187 aa11.98□□□□□ -0.49
IFT46-208ENST00000531201 USP19O94966 1318 aa11.98□□□□□ -0.49
IFT46-208ENST00000531201 TTC21AQ8NDW8 1320 aa11.98□□□□□ -0.49
IFT46-208ENST00000531201 SMC5Q8IY18 1101 aa11.97□□□□□ -0.49
IFT46-208ENST00000531201 PHACTR3Q96KR7 559 aa11.97□□□□□ -0.49
IFT46-208ENST00000531201 ZBTB40Q9NUA8 1239 aa11.97□□□□□ -0.49
IFT46-208ENST00000531201 DAXXQ9UER7 740 aaPredicted RBP11.97□□□□□ -0.49
IFT46-208ENST00000531201 KIF24Q5T7B8 1368 aa11.97□□□□□ -0.49
IFT46-208ENST00000531201 HMOX1P09601 288 aa11.96□□□□□ -0.49
IFT46-208ENST00000531201 ITPRIPQ8IWB1 547 aa11.96□□□□□ -0.49
IFT46-208ENST00000531201 TMEM57Q8N5G2 664 aa11.96□□□□□ -0.49
IFT46-208ENST00000531201 ZRANB1Q9UGI0 708 aa11.96□□□□□ -0.49
IFT46-208ENST00000531201 PIK3C2AO00443 1686 aa11.96□□□□□ -0.49
IFT46-208ENST00000531201 ACEP12821 1306 aa11.96□□□□□ -0.49
IFT46-208ENST00000531201 ARHGEF10O15013 1369 aa11.96□□□□□ -0.5
IFT46-208ENST00000531201 ZNF142P52746 1687 aaPredicted RBP11.96□□□□□ -0.5
IFT46-208ENST00000531201 VAMP4O75379 141 aa11.95□□□□□ -0.5
IFT46-208ENST00000531201 CFAP44Q96MT7 982 aa11.95□□□□□ -0.5
IFT46-208ENST00000531201 ABCC4O15439 1325 aa11.95□□□□□ -0.5
IFT46-208ENST00000531201 NCKAP5LQ9HCH0 1330 aa11.95□□□□□ -0.5
IFT46-208ENST00000531201 CEP170BQ9Y4F5 1589 aaPredicted RBP11.95□□□□□ -0.5
IFT46-208ENST00000531201 FBLN1P23142 703 aa11.95□□□□□ -0.5
IFT46-208ENST00000531201 DEKP35659 375 aaKnown RBP11.95□□□□□ -0.5
IFT46-208ENST00000531201 HAP1P54257 671 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms