RNA–Protein interactions for RNA: ENST00000530903.1

RPUSD4-205, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-205ENST00000530903 NME9Q86XW9 330 aa13.57□□□□□ -0.24
RPUSD4-205ENST00000530903 BMP2KQ9NSY1 1161 aaPredicted RBP13.57□□□□□ -0.24
RPUSD4-205ENST00000530903 PIK3C2AO00443 1686 aa13.57□□□□□ -0.24
RPUSD4-205ENST00000530903 RALBP1Q15311 655 aa13.56□□□□□ -0.24
RPUSD4-205ENST00000530903 BRINP3Q76B58 766 aa13.56□□□□□ -0.24
RPUSD4-205ENST00000530903 RASEFQ8IZ41 740 aa13.56□□□□□ -0.24
RPUSD4-205ENST00000530903 DDX17Q92841 729 aaKnown RBP13.56□□□□□ -0.24
RPUSD4-205ENST00000530903 TRPM3Q9HCF6 1732 aaPredicted RBP13.56□□□□□ -0.24
RPUSD4-205ENST00000530903 TIE1P35590 1138 aa13.56□□□□□ -0.24
RPUSD4-205ENST00000530903 MORC1Q86VD1 984 aa13.56□□□□□ -0.24
RPUSD4-205ENST00000530903 ROBO1Q9Y6N7 1651 aa13.55□□□□□ -0.24
RPUSD4-205ENST00000530903 MAP3K13O43283 966 aa13.55□□□□□ -0.24
RPUSD4-205ENST00000530903 TNNT2P45379 298 aaPredicted RBP13.55□□□□□ -0.24
RPUSD4-205ENST00000530903 KRT28Q7Z3Y7 464 aa13.55□□□□□ -0.24
RPUSD4-205ENST00000530903 TTC21AQ8NDW8 1320 aa13.54□□□□□ -0.24
RPUSD4-205ENST00000530903 POTEFA5A3E0 1075 aa13.54□□□□□ -0.24
RPUSD4-205ENST00000530903 NHSL1Q5SYE7 1610 aa13.54□□□□□ -0.24
RPUSD4-205ENST00000530903 NPHP3Q7Z494 1330 aa13.53□□□□□ -0.24
RPUSD4-205ENST00000530903 MYBBP1AQ9BQG0 1328 aaKnown RBP13.53□□□□□ -0.24
RPUSD4-205ENST00000530903 MARF1Q9Y4F3 1742 aaKnown RBP13.53□□□□□ -0.24
RPUSD4-205ENST00000530903 NUTM2GQ5VZR2 741 aa13.53□□□□□ -0.24
RPUSD4-205ENST00000530903 TRPC6Q9Y210 931 aa13.53□□□□□ -0.24
RPUSD4-205ENST00000530903 PXDNQ92626 1479 aa13.53□□□□□ -0.24
RPUSD4-205ENST00000530903 BRD4O60885 1362 aaPredicted RBP13.52□□□□□ -0.24
RPUSD4-205ENST00000530903 CCDC184Q52MB2 194 aa13.52□□□□□ -0.25
RPUSD4-205ENST00000530903 CERKQ8TCT0 537 aa13.52□□□□□ -0.25
RPUSD4-205ENST00000530903 COG3Q96JB2 828 aa13.52□□□□□ -0.25
RPUSD4-205ENST00000530903 IQSEC2Q5JU85 1478 aa13.52□□□□□ -0.25
RPUSD4-205ENST00000530903 OVOS2A0A0J9YW53 1432 aa13.51□□□□□ -0.25
RPUSD4-205ENST00000530903 OVOS2Q6IE36 1432 aa13.51□□□□□ -0.25
RPUSD4-205ENST00000530903 USP54Q70EL1 1684 aa13.51□□□□□ -0.25
RPUSD4-205ENST00000530903 ALS2Q96Q42 1657 aa13.51□□□□□ -0.25
RPUSD4-205ENST00000530903 CCER2I3L3R5 266 aa13.51□□□□□ -0.25
RPUSD4-205ENST00000530903 PPP2R1AP30153 589 aa13.51□□□□□ -0.25
RPUSD4-205ENST00000530903 ABTB2Q8N961 1025 aa13.51□□□□□ -0.25
RPUSD4-205ENST00000530903 UBAP1LF5GYI3 381 aa13.5□□□□□ -0.25
RPUSD4-205ENST00000530903 TOM1O60784 492 aa13.5□□□□□ -0.25
RPUSD4-205ENST00000530903 LMOD2Q6P5Q4 547 aa13.5□□□□□ -0.25
RPUSD4-205ENST00000530903 MAP2P11137 1827 aaKnown RBP13.5□□□□□ -0.25
RPUSD4-205ENST00000530903 NLRP6P59044 892 aa13.49□□□□□ -0.25
RPUSD4-205ENST00000530903 PIP4K2BP78356 416 aa13.49□□□□□ -0.25
RPUSD4-205ENST00000530903 SCUBE2Q9NQ36 999 aa13.49□□□□□ -0.25
RPUSD4-205ENST00000530903 USP31Q70CQ4 1352 aa13.49□□□□□ -0.25
RPUSD4-205ENST00000530903 SOX12O15370 315 aa13.48□□□□□ -0.25
RPUSD4-205ENST00000530903 FBLN1P23142 703 aa13.48□□□□□ -0.25
RPUSD4-205ENST00000530903 NLRP13Q86W25 1043 aa13.48□□□□□ -0.25
RPUSD4-205ENST00000530903 SGIP1Q9BQI5 828 aa13.48□□□□□ -0.25
RPUSD4-205ENST00000530903 MRS2Q9HD23 443 aa13.48□□□□□ -0.25
RPUSD4-205ENST00000530903 SBNO1A3KN83 1393 aa13.48□□□□□ -0.25
RPUSD4-205ENST00000530903 TNS3Q68CZ2 1445 aa13.48□□□□□ -0.25
RPUSD4-205ENST00000530903 AHDC1Q5TGY3 1603 aaPredicted RBP13.48□□□□□ -0.25
RPUSD4-205ENST00000530903 SOS2Q07890 1332 aaPredicted RBP13.47□□□□□ -0.25
RPUSD4-205ENST00000530903 PHLPP1O60346 1717 aa13.46□□□□□ -0.25
RPUSD4-205ENST00000530903 SPATA31A3Q5VYP0 1347 aa13.46□□□□□ -0.26
RPUSD4-205ENST00000530903 MTHFSP49914 203 aa13.45□□□□□ -0.26
RPUSD4-205ENST00000530903 PHRF1Q9P1Y6 1649 aaKnown RBP13.44□□□□□ -0.26
RPUSD4-205ENST00000530903 AATKQ6ZMQ8 1374 aa13.44□□□□□ -0.26
RPUSD4-205ENST00000530903 TTLL13PA6NNM8 815 aa13.44□□□□□ -0.26
RPUSD4-205ENST00000530903 RRS1Q15050 365 aaKnown RBP13.44□□□□□ -0.26
RPUSD4-205ENST00000530903 MED1Q15648 1581 aaPredicted RBP13.44□□□□□ -0.26
RPUSD4-205ENST00000530903 SLIT3O75094 1523 aa13.44□□□□□ -0.26
RPUSD4-205ENST00000530903 LTN1O94822 1766 aa13.43□□□□□ -0.26
RPUSD4-205ENST00000530903 ARHGEF10O15013 1369 aa13.43□□□□□ -0.26
RPUSD4-205ENST00000530903 CRYBG1Q9Y4K1 1723 aa13.43□□□□□ -0.26
RPUSD4-205ENST00000530903 PPM1GO15355 546 aaPredicted RBP13.43□□□□□ -0.26
RPUSD4-205ENST00000530903 POLKQ9UBT6 870 aa13.43□□□□□ -0.26
RPUSD4-205ENST00000530903 EMILIN1Q9Y6C2 1016 aa13.43□□□□□ -0.26
RPUSD4-205ENST00000530903 COL16A1Q07092 1604 aaPredicted RBP13.43□□□□□ -0.26
RPUSD4-205ENST00000530903 NFAT5O94916 1531 aa13.43□□□□□ -0.26
RPUSD4-205ENST00000530903 PEAK1Q9H792 1746 aa13.42□□□□□ -0.26
RPUSD4-205ENST00000530903 USP19O94966 1318 aa13.42□□□□□ -0.26
RPUSD4-205ENST00000530903 NUBP1P53384 320 aa13.42□□□□□ -0.26
RPUSD4-205ENST00000530903 CENPBP07199 599 aaPredicted RBP13.41□□□□□ -0.26
RPUSD4-205ENST00000530903 CABLES1Q8TDN4 633 aa13.41□□□□□ -0.26
RPUSD4-205ENST00000530903 FBXO41Q8TF61 875 aa13.41□□□□□ -0.26
RPUSD4-205ENST00000530903 ABCA3Q99758 1704 aa13.41□□□□□ -0.26
RPUSD4-205ENST00000530903 SMG6Q86US8 1419 aaKnown RBP13.41□□□□□ -0.26
RPUSD4-205ENST00000530903 SHPRHQ149N8 1683 aa13.4□□□□□ -0.26
RPUSD4-205ENST00000530903 GCP02774 474 aa13.4□□□□□ -0.26
RPUSD4-205ENST00000530903 FAM9BQ8IZU0 186 aa13.4□□□□□ -0.26
RPUSD4-205ENST00000530903 PLCD3Q8N3E9 789 aa13.4□□□□□ -0.26
RPUSD4-205ENST00000530903 CFAP53Q96M91 514 aa13.4□□□□□ -0.26
RPUSD4-205ENST00000530903 ZBTB47Q9UFB7 747 aaPredicted RBP13.4□□□□□ -0.26
RPUSD4-205ENST00000530903 MAP3K19Q56UN5 1328 aa13.4□□□□□ -0.26
RPUSD4-205ENST00000530903 COL3A1P02461 1466 aaPredicted RBP13.4□□□□□ -0.27
RPUSD4-205ENST00000530903 CDK12Q9NYV4 1490 aaPredicted RBP13.4□□□□□ -0.27
RPUSD4-205ENST00000530903 ZBTB7CA1YPR0 619 aa13.39□□□□□ -0.27
RPUSD4-205ENST00000530903 IER5LQ5T953 404 aa13.39□□□□□ -0.27
RPUSD4-205ENST00000530903 KCNH5Q8NCM2 988 aa13.39□□□□□ -0.27
RPUSD4-205ENST00000530903 PNISRQ8TF01 805 aaKnown RBP13.39□□□□□ -0.27
RPUSD4-205ENST00000530903 LRRC59Q96AG4 307 aaKnown RBP13.39□□□□□ -0.27
RPUSD4-205ENST00000530903 COLQQ9Y215 455 aaPredicted RBP13.39□□□□□ -0.27
RPUSD4-205ENST00000530903 AMPHP49418 695 aa13.38□□□□□ -0.27
RPUSD4-205ENST00000530903 YTHDC1Q96MU7 727 aaKnown RBP13.37□□□□□ -0.27
RPUSD4-205ENST00000530903 COL22A1Q8NFW1 1626 aaPredicted RBP13.37□□□□□ -0.27
RPUSD4-205ENST00000530903 PNPLA6Q8IY17 1366 aa13.37□□□□□ -0.27
RPUSD4-205ENST00000530903 HAP1P54257 671 aaPredicted RBP13.36□□□□□ -0.27
RPUSD4-205ENST00000530903 ZC3H6P61129 1189 aaKnown RBP13.36□□□□□ -0.27
RPUSD4-205ENST00000530903 WDR43Q15061 677 aaKnown RBP eCLIP13.36□□□□□ -0.27
RPUSD4-205ENST00000530903 FLT4P35916 1363 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms