RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 SDF4Q9BRK5 362 aa10.11□□□□□ -0.79
CTNND1-227ENST00000530748 SRCIN1Q9C0H9 1055 aa10.11□□□□□ -0.79
CTNND1-227ENST00000530748 KINO60870 393 aaKnown RBP10.11□□□□□ -0.79
CTNND1-227ENST00000530748 FILIP1LQ4L180 1135 aa10.11□□□□□ -0.79
CTNND1-227ENST00000530748 HSP90AB2PQ58FF8 381 aa10.11□□□□□ -0.79
CTNND1-227ENST00000530748 CYP46A1Q9Y6A2 500 aa10.11□□□□□ -0.79
CTNND1-227ENST00000530748 CCDC69A6NI79 296 aa10.11□□□□□ -0.79
CTNND1-227ENST00000530748 SMC2O95347 1197 aa10.11□□□□□ -0.79
CTNND1-227ENST00000530748 PIP4K2AP48426 406 aaPredicted RBP10.11□□□□□ -0.79
CTNND1-227ENST00000530748 MYO6Q9UM54 1294 aa10.11□□□□□ -0.79
CTNND1-227ENST00000530748 R3HCC1Q9Y3T6 440 aaKnown RBP10.11□□□□□ -0.79
CTNND1-227ENST00000530748 RRP12Q5JTH9 1297 aaKnown RBP10.1□□□□□ -0.79
CTNND1-227ENST00000530748 NEK4P51957 841 aa10.1□□□□□ -0.79
CTNND1-227ENST00000530748 TOM1L2Q6ZVM7 507 aa10.1□□□□□ -0.79
CTNND1-227ENST00000530748 PATL2C9JE40 543 aaKnown RBP10.1□□□□□ -0.79
CTNND1-227ENST00000530748 CCDC173Q0VFZ6 552 aa10.1□□□□□ -0.79
CTNND1-227ENST00000530748 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.1□□□□□ -0.79
CTNND1-227ENST00000530748 MVPQ14764 893 aaKnown RBP10.1□□□□□ -0.79
CTNND1-227ENST00000530748 ZNF530Q6P9A1 599 aaPredicted RBP10.1□□□□□ -0.79
CTNND1-227ENST00000530748 NACAP1Q9BZK3 213 aa10.1□□□□□ -0.79
CTNND1-227ENST00000530748 BTBD11A6QL63 1104 aa10.09□□□□□ -0.79
CTNND1-227ENST00000530748 NSD3Q9BZ95 1437 aa10.09□□□□□ -0.79
CTNND1-227ENST00000530748 TRAK2O60296 914 aa10.09□□□□□ -0.79
CTNND1-227ENST00000530748 BCAR3O75815 825 aa10.09□□□□□ -0.79
CTNND1-227ENST00000530748 ERCC4Q92889 916 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-227ENST00000530748 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.09□□□□□ -0.791e-6■■■■■ 38.5
CTNND1-227ENST00000530748 DACH1Q9UI36 760 aa10.09□□□□□ -0.79
CTNND1-227ENST00000530748 CAVIN1Q6NZI2 390 aaKnown RBP10.09□□□□□ -0.79
CTNND1-227ENST00000530748 PRKCSHP14314 528 aaPredicted RBP10.09□□□□□ -0.79
CTNND1-227ENST00000530748 WWC2Q6AWC2 1192 aa10.09□□□□□ -0.79
CTNND1-227ENST00000530748 SLC12A5Q9H2X9 1139 aa10.09□□□□□ -0.79
CTNND1-227ENST00000530748 OFD1O75665 1012 aa10.09□□□□□ -0.79
CTNND1-227ENST00000530748 RDXP35241 583 aaKnown RBP10.09□□□□□ -0.79
CTNND1-227ENST00000530748 AKNAQ7Z591 1439 aa10.09□□□□□ -0.79
CTNND1-227ENST00000530748 STK38Q15208 465 aa10.08□□□□□ -0.8
CTNND1-227ENST00000530748 TMEM132AQ24JP5 1023 aa10.08□□□□□ -0.8
CTNND1-227ENST00000530748 PRPF40AO75400 957 aaKnown RBP10.08□□□□□ -0.8
CTNND1-227ENST00000530748 MAP4K4O95819 1239 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-227ENST00000530748 DHX8Q14562 1220 aaKnown RBP10.08□□□□□ -0.8
CTNND1-227ENST00000530748 ANKLE2Q86XL3 938 aa10.08□□□□□ -0.8
CTNND1-227ENST00000530748 MYL6BP14649 208 aa10.08□□□□□ -0.8
CTNND1-227ENST00000530748 NBPF8Q3BBV2 869 aa10.08□□□□□ -0.8
CTNND1-227ENST00000530748 CCAR1Q8IX12 1150 aaKnown RBP10.08□□□□□ -0.8
CTNND1-227ENST00000530748 TRIM5Q9C035 493 aa10.08□□□□□ -0.8
CTNND1-227ENST00000530748 FAM13BQ9NYF5 915 aa10.08□□□□□ -0.8
CTNND1-227ENST00000530748 KRT18P05783 430 aaKnown RBP10.08□□□□□ -0.8
CTNND1-227ENST00000530748 SIL1Q9H173 461 aa10.08□□□□□ -0.8
CTNND1-227ENST00000530748 KIAA0586Q9BVV6 1533 aa10.08□□□□□ -0.8
CTNND1-227ENST00000530748 CHD1LQ86WJ1 897 aa10.08□□□□□ -0.8
CTNND1-227ENST00000530748 JMYQ8N9B5 988 aa10.08□□□□□ -0.8
CTNND1-227ENST00000530748 WDR97A6NE52 1622 aa10.07□□□□□ -0.8
CTNND1-227ENST00000530748 K7ELQ4 463 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-227ENST00000530748 ATF7IPQ6VMQ6 1270 aa10.07□□□□□ -0.8
CTNND1-227ENST00000530748 CCDC57Q2TAC2 916 aa10.07□□□□□ -0.8
CTNND1-227ENST00000530748 MAGI1Q96QZ7 1491 aaPredicted RBP10.07□□□□□ -0.8
CTNND1-227ENST00000530748 LAMC3Q9Y6N6 1575 aa10.07□□□□□ -0.8
CTNND1-227ENST00000530748 HSP90B2PQ58FF3 399 aa10.07□□□□□ -0.8
CTNND1-227ENST00000530748 AACSQ86V21 672 aa10.07□□□□□ -0.8
CTNND1-227ENST00000530748 TRIM22Q8IYM9 498 aa10.07□□□□□ -0.8
CTNND1-227ENST00000530748 FCHSD2O94868 740 aa10.06□□□□□ -0.8
CTNND1-227ENST00000530748 NOM1Q5C9Z4 860 aaKnown RBP10.06□□□□□ -0.8
CTNND1-227ENST00000530748 DDX54Q8TDD1 881 aaKnown RBP10.06□□□□□ -0.8
CTNND1-227ENST00000530748 ARHGEF11O15085 1522 aa10.06□□□□□ -0.8
CTNND1-227ENST00000530748 STK3Q13188 491 aa10.06□□□□□ -0.8
CTNND1-227ENST00000530748 SYCP1Q15431 976 aa10.06□□□□□ -0.8
CTNND1-227ENST00000530748 WDR33Q9C0J8 1336 aaKnown RBP10.06□□□□□ -0.8
CTNND1-227ENST00000530748 GNAT3A8MTJ3 354 aa10.06□□□□□ -0.8
CTNND1-227ENST00000530748 CDKL5O76039 1030 aa10.06□□□□□ -0.8
CTNND1-227ENST00000530748 ZFYVE27Q5T4F4 411 aa10.06□□□□□ -0.8
CTNND1-227ENST00000530748 PDRG1Q9NUG6 133 aa10.06□□□□□ -0.8
CTNND1-227ENST00000530748 ABCA10Q8WWZ4 1543 aa10.06□□□□□ -0.8
CTNND1-227ENST00000530748 ZSCAN31Q96LW9 406 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-227ENST00000530748 NOL7Q9UMY1 257 aaKnown RBP10.05□□□□□ -0.8
CTNND1-227ENST00000530748 RRS1Q15050 365 aaKnown RBP10.05□□□□□ -0.8
CTNND1-227ENST00000530748 NFE2L2Q16236 605 aa10.05□□□□□ -0.8
CTNND1-227ENST00000530748 RNF214Q8ND24 703 aa10.05□□□□□ -0.8
CTNND1-227ENST00000530748 CEBPZQ03701 1054 aaKnown RBP10.05□□□□□ -0.8
CTNND1-227ENST00000530748 TTLL5Q6EMB2 1281 aa10.05□□□□□ -0.8
CTNND1-227ENST00000530748 MPHOSPH8Q99549 860 aa10.05□□□□□ -0.8
CTNND1-227ENST00000530748 SOGA3Q5TF21 947 aa10.05□□□□□ -0.8
CTNND1-227ENST00000530748 NUTM2BA6NNL0 878 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-227ENST00000530748 NUTM2EB1AL46 878 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-227ENST00000530748 STIM1Q13586 685 aa10.04□□□□□ -0.8
CTNND1-227ENST00000530748 NUTM2AQ8IVF1 878 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-227ENST00000530748 FIBPO43427 364 aa10.04□□□□□ -0.8
CTNND1-227ENST00000530748 CCDC192P0DO97 292 aa10.04□□□□□ -0.8
CTNND1-227ENST00000530748 ATP2B1P20020 1258 aa10.04□□□□□ -0.8
CTNND1-227ENST00000530748 TXLNBQ8N3L3 684 aa10.04□□□□□ -0.8
CTNND1-227ENST00000530748 CBFA2T2O43439 604 aa10.04□□□□□ -0.8
CTNND1-227ENST00000530748 KCNH5Q8NCM2 988 aa10.04□□□□□ -0.8
CTNND1-227ENST00000530748 ZNF428Q96B54 188 aa10.04□□□□□ -0.8
CTNND1-227ENST00000530748 TNMDQ9H2S6 317 aa10.04□□□□□ -0.8
CTNND1-227ENST00000530748 CTNNA3Q9UI47 895 aa10.04□□□□□ -0.8
CTNND1-227ENST00000530748 ATP2B2Q01814 1243 aa10.03□□□□□ -0.8
CTNND1-227ENST00000530748 ZNHIT6Q9NWK9 470 aaKnown RBP10.03□□□□□ -0.8
CTNND1-227ENST00000530748 SERPINC1P01008 464 aa10.03□□□□□ -0.8
CTNND1-227ENST00000530748 MTERF4Q7Z6M4 381 aaKnown RBP10.03□□□□□ -0.8
CTNND1-227ENST00000530748 STK11IPQ8N1F8 1099 aa10.03□□□□□ -0.8
CTNND1-227ENST00000530748 BRPF1P55201 1214 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-227ENST00000530748 NUP133Q8WUM0 1156 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms