RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 DDX49Q9Y6V7 483 aaKnown RBP14.48□□□□□ -0.09
TRIM3-210ENST00000530724 ARHGEF28Q8N1W1 1705 aaKnown RBP14.48□□□□□ -0.09
TRIM3-210ENST00000530724 FAM135BQ49AJ0 1406 aa14.48□□□□□ -0.09
TRIM3-210ENST00000530724 ATAD2Q6PL18 1390 aa14.47□□□□□ -0.09
TRIM3-210ENST00000530724 SSFA2P28290 1259 aa14.47□□□□□ -0.09
TRIM3-210ENST00000530724 ZSCAN23Q3MJ62 389 aa14.47□□□□□ -0.09
TRIM3-210ENST00000530724 UTP14CQ5TAP6 766 aaKnown RBP14.47□□□□□ -0.09
TRIM3-210ENST00000530724 CCDC39Q9UFE4 941 aa14.47□□□□□ -0.09
TRIM3-210ENST00000530724 CD2BP2O95400 341 aaKnown RBP14.46□□□□□ -0.09
TRIM3-210ENST00000530724 MBD3O95983 291 aa14.46□□□□□ -0.09
TRIM3-210ENST00000530724 NEUROD2Q15784 382 aa14.46□□□□□ -0.09
TRIM3-210ENST00000530724 HECW2Q9P2P5 1572 aa14.46□□□□□ -0.09
TRIM3-210ENST00000530724 EPB41L2O43491 1005 aaKnown RBP14.45□□□□□ -0.1
TRIM3-210ENST00000530724 CPSF1Q10570 1443 aaKnown RBP14.45□□□□□ -0.1
TRIM3-210ENST00000530724 SASS6Q6UVJ0 657 aa14.45□□□□□ -0.1
TRIM3-210ENST00000530724 LRSAM1Q6UWE0 723 aa14.45□□□□□ -0.1
TRIM3-210ENST00000530724 MRPL50Q8N5N7 158 aaKnown RBP14.45□□□□□ -0.1
TRIM3-210ENST00000530724 NPATQ14207 1427 aa14.44□□□□□ -0.1
TRIM3-210ENST00000530724 ZNF853P0CG23 659 aa14.44□□□□□ -0.1
TRIM3-210ENST00000530724 GTF2F1P35269 517 aaKnown RBP eCLIP14.44□□□□□ -0.1
TRIM3-210ENST00000530724 TSR2Q969E8 191 aaKnown RBP14.44□□□□□ -0.1
TRIM3-210ENST00000530724 LNPKQ9C0E8 428 aa14.44□□□□□ -0.1
TRIM3-210ENST00000530724 DCTPP1Q9H773 170 aa14.44□□□□□ -0.1
TRIM3-210ENST00000530724 MCM2P49736 904 aa14.43□□□□□ -0.1
TRIM3-210ENST00000530724 AFAP1Q8N556 730 aa14.43□□□□□ -0.1
TRIM3-210ENST00000530724 USP26Q9BXU7 913 aa14.43□□□□□ -0.1
TRIM3-210ENST00000530724 API5Q9BZZ5 524 aaKnown RBP14.43□□□□□ -0.1
TRIM3-210ENST00000530724 IFT57Q9NWB7 429 aa14.43□□□□□ -0.1
TRIM3-210ENST00000530724 CD163L1Q9NR16 1453 aa14.43□□□□□ -0.1
TRIM3-210ENST00000530724 MLH3Q9UHC1 1453 aa14.43□□□□□ -0.1
TRIM3-210ENST00000530724 NEXMIFQ5QGS0 1516 aa14.42□□□□□ -0.1
TRIM3-210ENST00000530724 UVSSAQ2YD98 709 aa14.42□□□□□ -0.1
TRIM3-210ENST00000530724 PRIMPOLQ96LW4 560 aa14.42□□□□□ -0.1
TRIM3-210ENST00000530724 A0A1W2PP64 1363 aa14.42□□□□□ -0.1
TRIM3-210ENST00000530724 KIDINS220Q9ULH0 1771 aa14.42□□□□□ -0.1
TRIM3-210ENST00000530724 CHD1O14646 1710 aa14.41□□□□□ -0.1
TRIM3-210ENST00000530724 KIF3BO15066 747 aa14.41□□□□□ -0.1
TRIM3-210ENST00000530724 VAMP4O75379 141 aa14.41□□□□□ -0.1
TRIM3-210ENST00000530724 TTC22Q5TAA0 569 aa14.41□□□□□ -0.1
TRIM3-210ENST00000530724 INTS3Q68E01 1043 aaKnown RBP14.41□□□□□ -0.1
TRIM3-210ENST00000530724 SIRT2Q8IXJ6 389 aa14.41□□□□□ -0.1
TRIM3-210ENST00000530724 RBSNQ9H1K0 784 aa14.41□□□□□ -0.1
TRIM3-210ENST00000530724 ST18O60284 1047 aa14.4□□□□□ -0.1
TRIM3-210ENST00000530724 PLEKHM2Q8IWE5 1019 aa14.4□□□□□ -0.1
TRIM3-210ENST00000530724 FAM184AQ8NB25 1140 aa14.4□□□□□ -0.1
TRIM3-210ENST00000530724 INTS4Q96HW7 963 aaKnown RBP14.4□□□□□ -0.1
TRIM3-210ENST00000530724 LRRC7Q96NW7 1537 aa14.4□□□□□ -0.1
TRIM3-210ENST00000530724 ERCC6L2Q5T890 1561 aa14.39□□□□□ -0.11
TRIM3-210ENST00000530724 VGFO15240 615 aaPredicted RBP14.39□□□□□ -0.11
TRIM3-210ENST00000530724 HAP1P54257 671 aaPredicted RBP14.39□□□□□ -0.11
TRIM3-210ENST00000530724 GNAI1P63096 354 aa14.39□□□□□ -0.11
TRIM3-210ENST00000530724 CUL4AQ13619 759 aa14.39□□□□□ -0.11
TRIM3-210ENST00000530724 ANKRD45Q5TZF3 282 aa14.39□□□□□ -0.11
TRIM3-210ENST00000530724 ARXQ96QS3 562 aa14.39□□□□□ -0.11
TRIM3-210ENST00000530724 OSBPL3Q9H4L5 887 aa14.39□□□□□ -0.11
TRIM3-210ENST00000530724 TERF2IPQ9NYB0 399 aa14.39□□□□□ -0.11
TRIM3-210ENST00000530724 DIAPH1O60610 1272 aaKnown RBP14.38□□□□□ -0.11
TRIM3-210ENST00000530724 GSPT1P15170 499 aaKnown RBP14.38□□□□□ -0.11
TRIM3-210ENST00000530724 HMGN5P82970 282 aaKnown RBP14.38□□□□□ -0.11
TRIM3-210ENST00000530724 RPAP2Q8IXW5 612 aaPredicted RBP14.38□□□□□ -0.11
TRIM3-210ENST00000530724 CDK12Q9NYV4 1490 aaPredicted RBP14.38□□□□□ -0.11
TRIM3-210ENST00000530724 CAMSAP1Q5T5Y3 1602 aa14.37□□□□□ -0.11
TRIM3-210ENST00000530724 UQCRHLA0A096LP55 91 aa14.37□□□□□ -0.11
TRIM3-210ENST00000530724 REC8O95072 547 aa14.37□□□□□ -0.11
TRIM3-210ENST00000530724 UQCRHP07919 91 aa14.37□□□□□ -0.11
TRIM3-210ENST00000530724 ANAPC15P60006 121 aa14.37□□□□□ -0.11
TRIM3-210ENST00000530724 LMOD3Q0VAK6 560 aa14.37□□□□□ -0.11
TRIM3-210ENST00000530724 NFE2L2Q16236 605 aa14.37□□□□□ -0.11
TRIM3-210ENST00000530724 TMEM87AQ8NBN3 555 aa14.37□□□□□ -0.11
TRIM3-210ENST00000530724 MYRIPQ8NFW9 859 aa14.37□□□□□ -0.11
TRIM3-210ENST00000530724 TRAK1Q9UPV9 953 aa14.37□□□□□ -0.11
TRIM3-210ENST00000530724 ATP10DQ9P241 1426 aa14.37□□□□□ -0.11
TRIM3-210ENST00000530724 PTPRMP28827 1452 aa14.37□□□□□ -0.11
TRIM3-210ENST00000530724 ATP7BP35670 1465 aa14.37□□□□□ -0.11
TRIM3-210ENST00000530724 SSH2Q76I76 1423 aa14.36□□□□□ -0.11
TRIM3-210ENST00000530724 FYB1O15117 783 aa14.36□□□□□ -0.11
TRIM3-210ENST00000530724 BRD1O95696 1058 aa14.36□□□□□ -0.11
TRIM3-210ENST00000530724 PRIM1P49642 420 aaKnown RBP14.36□□□□□ -0.11
TRIM3-210ENST00000530724 CAVIN1Q6NZI2 390 aaKnown RBP14.36□□□□□ -0.11
TRIM3-210ENST00000530724 ANKRD44Q8N8A2 993 aa14.36□□□□□ -0.11
TRIM3-210ENST00000530724 GPT2Q8TD30 523 aa14.36□□□□□ -0.11
TRIM3-210ENST00000530724 SYAP1Q96A49 352 aaPredicted RBP14.36□□□□□ -0.11
TRIM3-210ENST00000530724 CCDC94Q9BW85 323 aaPredicted RBP14.36□□□□□ -0.11
TRIM3-210ENST00000530724 ZDHHC9Q9Y397 364 aa14.36□□□□□ -0.11
TRIM3-210ENST00000530724 AATKQ6ZMQ8 1374 aa14.35□□□□□ -0.11
TRIM3-210ENST00000530724 PHF14O94880 888 aa14.35□□□□□ -0.11
TRIM3-210ENST00000530724 MCTP1Q6DN14 999 aa14.35□□□□□ -0.11
TRIM3-210ENST00000530724 CASC1Q6TDU7 716 aa14.35□□□□□ -0.11
TRIM3-210ENST00000530724 RBM42Q9BTD8 480 aaKnown RBP14.35□□□□□ -0.11
TRIM3-210ENST00000530724 SPTLC3Q9NUV7 552 aa14.35□□□□□ -0.11
TRIM3-210ENST00000530724 DLC1Q96QB1 1528 aa14.35□□□□□ -0.11
TRIM3-210ENST00000530724 RTL1A6NKG5 1358 aa14.34□□□□□ -0.11
TRIM3-210ENST00000530724 R3HCC1Q9Y3T6 440 aaKnown RBP14.34□□□□□ -0.11
TRIM3-210ENST00000530724 ARHGEF40Q8TER5 1519 aa14.34□□□□□ -0.11
TRIM3-210ENST00000530724 KIAA0232Q92628 1395 aa14.34□□□□□ -0.11
TRIM3-210ENST00000530724 TNNT2P45379 298 aaPredicted RBP14.33□□□□□ -0.12
TRIM3-210ENST00000530724 GTPBP4Q9BZE4 634 aaKnown RBP14.33□□□□□ -0.12
TRIM3-210ENST00000530724 LETM1O95202 739 aaPredicted RBP14.32□□□□□ -0.12
TRIM3-210ENST00000530724 DMTNQ08495 405 aa14.32□□□□□ -0.12
TRIM3-210ENST00000530724 KIAA2012Q0VF49 1180 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms