RNA–Protein interactions for RNA: ENST00000530075.1

GMDS-206, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-206ENST00000530075 SOX11P35716 441 aa10.4□□□□□ -0.74
GMDS-206ENST00000530075 KCTD15Q96SI1 283 aaPredicted RBP10.4□□□□□ -0.74
GMDS-206ENST00000530075 PDZRN3Q9UPQ7 1066 aa10.4□□□□□ -0.74
GMDS-206ENST00000530075 PIK3CDO00329 1044 aa10.39□□□□□ -0.75
GMDS-206ENST00000530075 CYP4X1Q8N118 509 aa10.39□□□□□ -0.75
GMDS-206ENST00000530075 CALR3Q96L12 384 aaKnown RBP10.39□□□□□ -0.75
GMDS-206ENST00000530075 MAP4K5Q9Y4K4 846 aa10.39□□□□□ -0.75
GMDS-206ENST00000530075 TTC24A2A3L6 582 aaPredicted RBP10.38□□□□□ -0.75
GMDS-206ENST00000530075 PHTF2Q8N3S3 785 aa10.38□□□□□ -0.75
GMDS-206ENST00000530075 UCN2Q96RP3 112 aa10.38□□□□□ -0.75
GMDS-206ENST00000530075 ESPNB1AK53 854 aa10.37□□□□□ -0.75
GMDS-206ENST00000530075 ADH1CP00326 375 aa10.37□□□□□ -0.75
GMDS-206ENST00000530075 SMPD1P17405 629 aa10.37□□□□□ -0.75
GMDS-206ENST00000530075 MCCD1P59942 119 aaPredicted RBP10.37□□□□□ -0.75
GMDS-206ENST00000530075 TSGA10IPQ3SY00 556 aa10.37□□□□□ -0.75
GMDS-206ENST00000530075 NR3C2P08235 984 aa10.36□□□□□ -0.75
GMDS-206ENST00000530075 FSHRP23945 695 aa10.36□□□□□ -0.75
GMDS-206ENST00000530075 RAB15P59190 212 aa10.36□□□□□ -0.75
GMDS-206ENST00000530075 NBPF20Q3BBV1 942 aa10.36□□□□□ -0.75
GMDS-206ENST00000530075 INTS6LQ5JSJ4 861 aaKnown RBP10.36□□□□□ -0.75
GMDS-206ENST00000530075 CDV3Q9UKY7 258 aaKnown RBP10.36□□□□□ -0.75
GMDS-206ENST00000530075 GFRA3O60609 400 aa10.34□□□□□ -0.75
GMDS-206ENST00000530075 CCDC85AQ96PX6 553 aaPredicted RBP10.34□□□□□ -0.75
GMDS-206ENST00000530075 WASF2Q9Y6W5 498 aa10.34□□□□□ -0.75
GMDS-206ENST00000530075 NR5A1Q13285 461 aa10.33□□□□□ -0.76
GMDS-206ENST00000530075 NNTQ13423 1086 aa10.33□□□□□ -0.76
GMDS-206ENST00000530075 TBC1D9Q6ZT07 1266 aa10.33□□□□□ -0.76
GMDS-206ENST00000530075 ERVH48-1M5A8F1 160 aa10.32□□□□□ -0.76
GMDS-206ENST00000530075 SLFNL1Q499Z3 407 aa10.32□□□□□ -0.76
GMDS-206ENST00000530075 ZNF592Q92610 1267 aa10.32□□□□□ -0.76
GMDS-206ENST00000530075 HPS1Q92902 700 aa10.32□□□□□ -0.76
GMDS-206ENST00000530075 RNF135Q8IUD6 432 aa10.31□□□□□ -0.76
GMDS-206ENST00000530075 CDCA7Q9BWT1 371 aaPredicted RBP10.31□□□□□ -0.76
GMDS-206ENST00000530075 TMPRSS4Q9NRS4 437 aa10.31□□□□□ -0.76
GMDS-206ENST00000530075 PPP1R26Q5T8A7 1209 aaPredicted RBP10.3□□□□□ -0.76
GMDS-206ENST00000530075 CCDC82Q8N4S0 544 aa10.3□□□□□ -0.76
GMDS-206ENST00000530075 TFIP11Q9UBB9 837 aaKnown RBP10.3□□□□□ -0.76
GMDS-206ENST00000530075 CHIC2Q9UKJ5 165 aa10.3□□□□□ -0.76
GMDS-206ENST00000530075 PALM3A6NDB9 673 aaPredicted RBP10.29□□□□□ -0.76
GMDS-206ENST00000530075 SKIP12755 728 aa10.29□□□□□ -0.76
GMDS-206ENST00000530075 SEPT12Q8IYM1 358 aa10.29□□□□□ -0.76
GMDS-206ENST00000530075 CCDC116Q8IYX3 515 aa10.29□□□□□ -0.76
GMDS-206ENST00000530075 KLF16Q9BXK1 252 aaPredicted RBP10.29□□□□□ -0.76
GMDS-206ENST00000530075 PPP1R12CQ9BZL4 782 aa10.29□□□□□ -0.76
GMDS-206ENST00000530075 FAM187AA6NFU0 413 aa10.28□□□□□ -0.76
GMDS-206ENST00000530075 NRG2O14511 850 aaPredicted RBP10.28□□□□□ -0.76
GMDS-206ENST00000530075 RNF20Q5VTR2 975 aa10.28□□□□□ -0.76
GMDS-206ENST00000530075 TRAF7Q6Q0C0 670 aa10.28□□□□□ -0.76
GMDS-206ENST00000530075 PCDHB11Q9Y5F2 797 aa10.28□□□□□ -0.76
GMDS-206ENST00000530075 DEPDC4Q8N2C3 294 aa10.27□□□□□ -0.77
GMDS-206ENST00000530075 PLPP7Q8NBV4 271 aa10.27□□□□□ -0.77
GMDS-206ENST00000530075 ITPKCQ96DU7 683 aa10.27□□□□□ -0.77
GMDS-206ENST00000530075 SCTRP47872 440 aa10.26□□□□□ -0.77
GMDS-206ENST00000530075 CFAP70Q5T0N1 1121 aa10.26□□□□□ -0.77
GMDS-206ENST00000530075 ZNF784Q8NCA9 323 aaPredicted RBP10.26□□□□□ -0.77
GMDS-206ENST00000530075 NFATC2IPQ8NCF5 419 aa10.26□□□□□ -0.77
GMDS-206ENST00000530075 ZFAND3Q9H8U3 227 aa10.26□□□□□ -0.77
GMDS-206ENST00000530075 ATP9BO43861 1147 aa10.25□□□□□ -0.77
GMDS-206ENST00000530075 TIMP2P16035 220 aa10.25□□□□□ -0.77
GMDS-206ENST00000530075 WDR4P57081 412 aaKnown RBP10.25□□□□□ -0.77
GMDS-206ENST00000530075 ARID3AQ99856 593 aa10.25□□□□□ -0.77
GMDS-206ENST00000530075 IRX2Q9BZI1 471 aaPredicted RBP10.25□□□□□ -0.77
GMDS-206ENST00000530075 DOLKQ9UPQ8 538 aa10.25□□□□□ -0.77
GMDS-206ENST00000530075 USP17L5A8MUK1 530 aa10.24□□□□□ -0.77
GMDS-206ENST00000530075 LILRA1O75019 489 aa10.24□□□□□ -0.77
GMDS-206ENST00000530075 ZIC2O95409 532 aaPredicted RBP10.24□□□□□ -0.77
GMDS-206ENST00000530075 ADD1P35611 737 aaKnown RBP10.24□□□□□ -0.77
GMDS-206ENST00000530075 DHX9Q08211 1270 aaKnown RBP10.24□□□□□ -0.77
GMDS-206ENST00000530075 CCDC97Q96F63 343 aaPredicted RBP10.24□□□□□ -0.77
GMDS-206ENST00000530075 CYLDQ9NQC7 956 aa10.24□□□□□ -0.77
GMDS-206ENST00000530075 SERPINA10Q9UK55 444 aa10.24□□□□□ -0.77
GMDS-206ENST00000530075 MAFBQ9Y5Q3 323 aaPredicted RBP10.24□□□□□ -0.77
GMDS-206ENST00000530075 EMILIN1Q9Y6C2 1016 aa10.24□□□□□ -0.77
GMDS-206ENST00000530075 RFX1P22670 979 aa10.23□□□□□ -0.77
GMDS-206ENST00000530075 LMOD1P29536 600 aaPredicted RBP10.23□□□□□ -0.77
GMDS-206ENST00000530075 OXLD1Q5BKU9 147 aa10.23□□□□□ -0.77
GMDS-206ENST00000530075 USP17L3A6NCW0 530 aa10.22□□□□□ -0.77
GMDS-206ENST00000530075 USP17L4A6NCW7 530 aa10.22□□□□□ -0.77
GMDS-206ENST00000530075 AVPP01185 164 aa10.22□□□□□ -0.77
GMDS-206ENST00000530075 CBLBQ13191 982 aa10.22□□□□□ -0.77
GMDS-206ENST00000530075 NCOA4Q13772 614 aa10.22□□□□□ -0.77
GMDS-206ENST00000530075 MAP7D1Q3KQU3 841 aa10.22□□□□□ -0.77
GMDS-206ENST00000530075 PKDCCQ504Y2 493 aa10.22□□□□□ -0.77
GMDS-206ENST00000530075 USP17L2Q6R6M4 530 aa10.22□□□□□ -0.77
GMDS-206ENST00000530075 USP17L1Q7RTZ2 530 aa10.22□□□□□ -0.77
GMDS-206ENST00000530075 DGAT1O75907 488 aa10.21□□□□□ -0.77
GMDS-206ENST00000530075 ERVK-9P63128 1117 aa10.21□□□□□ -0.77
GMDS-206ENST00000530075 LAPTM4AQ15012 233 aa10.2□□□□□ -0.78
GMDS-206ENST00000530075 CCDC125Q86Z20 511 aa10.2□□□□□ -0.78
GMDS-206ENST00000530075 PGPEP1Q9NXJ5 209 aa10.2□□□□□ -0.78
GMDS-206ENST00000530075 CAPN5O15484 640 aaPredicted RBP10.19□□□□□ -0.78
GMDS-206ENST00000530075 MYT1Q01538 1121 aa10.19□□□□□ -0.78
GMDS-206ENST00000530075 CC2D2BQ6DHV5 1058 aa10.19□□□□□ -0.78
GMDS-206ENST00000530075 PLEKHM2Q8IWE5 1019 aa10.19□□□□□ -0.78
GMDS-206ENST00000530075 SRPK2P78362 688 aaKnown RBP10.18□□□□□ -0.78
GMDS-206ENST00000530075 CDCA8Q53HL2 280 aa10.18□□□□□ -0.78
GMDS-206ENST00000530075 KANK4Q5T7N3 995 aaPredicted RBP10.18□□□□□ -0.78
GMDS-206ENST00000530075 KDF1Q8NAX2 398 aaPredicted RBP10.18□□□□□ -0.78
GMDS-206ENST00000530075 OSBPL3Q9H4L5 887 aa10.18□□□□□ -0.78
GMDS-206ENST00000530075 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms