RNA–Protein interactions for RNA: ENST00000528950.1

AMBRA1-206, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5 BASIC

Gene AMBRA1, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-206ENST00000528950 TPM4P67936 248 aa10.57□□□□□ -0.72
AMBRA1-206ENST00000528950 HOMER1Q86YM7 354 aa10.57□□□□□ -0.72
AMBRA1-206ENST00000528950 VGLL3A8MV65 326 aa10.56□□□□□ -0.72
AMBRA1-206ENST00000528950 NEK4P51957 841 aa10.56□□□□□ -0.72
AMBRA1-206ENST00000528950 TERF1P54274 439 aa10.56□□□□□ -0.72
AMBRA1-206ENST00000528950 UTP14CQ5TAP6 766 aaKnown RBP10.56□□□□□ -0.72
AMBRA1-206ENST00000528950 TAF3Q5VWG9 929 aa10.56□□□□□ -0.72
AMBRA1-206ENST00000528950 ESF1Q9H501 851 aaKnown RBP10.56□□□□□ -0.72
AMBRA1-206ENST00000528950 ZNF500O60304 480 aaPredicted RBP10.56□□□□□ -0.72
AMBRA1-206ENST00000528950 HDAC1Q13547 482 aaPredicted RBP10.56□□□□□ -0.72
AMBRA1-206ENST00000528950 MYO5CQ9NQX4 1742 aa10.56□□□□□ -0.72
AMBRA1-206ENST00000528950 HS1BP3Q53T59 392 aa10.56□□□□□ -0.72
AMBRA1-206ENST00000528950 LRSAM1Q6UWE0 723 aa10.56□□□□□ -0.72
AMBRA1-206ENST00000528950 ERICH4A6NGS2 130 aa10.56□□□□□ -0.72
AMBRA1-206ENST00000528950 HMMRO75330 724 aa10.56□□□□□ -0.72
AMBRA1-206ENST00000528950 SETQ01105 290 aaPredicted RBP10.56□□□□□ -0.72
AMBRA1-206ENST00000528950 NUCB1Q02818 461 aa10.56□□□□□ -0.72
AMBRA1-206ENST00000528950 BMP2KLQ5H9B9 411 aa10.56□□□□□ -0.72
AMBRA1-206ENST00000528950 GPRASP1Q5JY77 1395 aa10.55□□□□□ -0.72
AMBRA1-206ENST00000528950 ZNF445P59923 1031 aa10.55□□□□□ -0.72
AMBRA1-206ENST00000528950 PAXIP1Q6ZW49 1069 aaPredicted RBP10.55□□□□□ -0.72
AMBRA1-206ENST00000528950 RILPL2Q969X0 211 aa10.55□□□□□ -0.72
AMBRA1-206ENST00000528950 CARD14Q9BXL6 1004 aa10.55□□□□□ -0.72
AMBRA1-206ENST00000528950 LMBRD1Q9NUN5 540 aa10.55□□□□□ -0.72
AMBRA1-206ENST00000528950 ASXL1Q8IXJ9 1541 aa10.55□□□□□ -0.72
AMBRA1-206ENST00000528950 TRAPPC8Q9Y2L5 1435 aa10.55□□□□□ -0.72
AMBRA1-206ENST00000528950 NUTM2DQ5VT03 806 aaPredicted RBP10.55□□□□□ -0.72
AMBRA1-206ENST00000528950 MCM5P33992 734 aa10.54□□□□□ -0.72
AMBRA1-206ENST00000528950 DMTNQ08495 405 aa10.54□□□□□ -0.72
AMBRA1-206ENST00000528950 NOM1Q5C9Z4 860 aaKnown RBP10.54□□□□□ -0.72
AMBRA1-206ENST00000528950 INTS3Q68E01 1043 aaKnown RBP10.54□□□□□ -0.72
AMBRA1-206ENST00000528950 AEBP1Q8IUX7 1158 aa10.54□□□□□ -0.72
AMBRA1-206ENST00000528950 ARGLU1Q9NWB6 273 aaPredicted RBP10.54□□□□□ -0.72
AMBRA1-206ENST00000528950 NOLC1Q14978 699 aaKnown RBP eCLIP10.54□□□□□ -0.72
AMBRA1-206ENST00000528950 TPD52L1Q16890 204 aaPredicted RBP10.54□□□□□ -0.72
AMBRA1-206ENST00000528950 TMEM63CQ9P1W3 806 aa10.54□□□□□ -0.72
AMBRA1-206ENST00000528950 PLCD3Q8N3E9 789 aa10.54□□□□□ -0.72
AMBRA1-206ENST00000528950 PIK3C2GO75747 1445 aa10.54□□□□□ -0.72
AMBRA1-206ENST00000528950 GGT6Q6P531 493 aa10.53□□□□□ -0.72
AMBRA1-206ENST00000528950 SLC4A10Q6U841 1118 aa10.53□□□□□ -0.72
AMBRA1-206ENST00000528950 SRPK2P78362 688 aaKnown RBP10.53□□□□□ -0.72
AMBRA1-206ENST00000528950 TRERF1Q96PN7 1200 aa10.53□□□□□ -0.72
AMBRA1-206ENST00000528950 SYCP2Q9BX26 1530 aa10.53□□□□□ -0.72
AMBRA1-206ENST00000528950 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.52□□□□□ -0.72
AMBRA1-206ENST00000528950 U2AF2P26368 475 aaKnown RBP eCLIP10.52□□□□□ -0.726e-7■■■■□ 24.6
AMBRA1-206ENST00000528950 MNS1Q8NEH6 495 aa10.52□□□□□ -0.72
AMBRA1-206ENST00000528950 GPT2Q8TD30 523 aa10.52□□□□□ -0.72
AMBRA1-206ENST00000528950 CWC22Q9HCG8 908 aaKnown RBP10.52□□□□□ -0.72
AMBRA1-206ENST00000528950 A2MP01023 1474 aa10.52□□□□□ -0.73
AMBRA1-206ENST00000528950 CCDC27Q2M243 656 aa10.52□□□□□ -0.73
AMBRA1-206ENST00000528950 NOC3LQ8WTT2 800 aaKnown RBP10.52□□□□□ -0.73
AMBRA1-206ENST00000528950 GCC1Q96CN9 775 aa10.52□□□□□ -0.73
AMBRA1-206ENST00000528950 GGNBP2Q9H3C7 697 aa10.52□□□□□ -0.73
AMBRA1-206ENST00000528950 HSP90B1P14625 803 aaKnown RBP10.52□□□□□ -0.73
AMBRA1-206ENST00000528950 CCDC112Q8NEF3 446 aa10.52□□□□□ -0.73
AMBRA1-206ENST00000528950 MYRIPQ8NFW9 859 aa10.52□□□□□ -0.73
AMBRA1-206ENST00000528950 TRIM5Q9C035 493 aa10.52□□□□□ -0.73
AMBRA1-206ENST00000528950 CWC15Q9P013 229 aaKnown RBP10.52□□□□□ -0.73
AMBRA1-206ENST00000528950 ADCY5O95622 1261 aa10.52□□□□□ -0.73
AMBRA1-206ENST00000528950 TPM3P06753 285 aa10.52□□□□□ -0.73
AMBRA1-206ENST00000528950 ANO2Q9NQ90 1003 aa10.52□□□□□ -0.73
AMBRA1-206ENST00000528950 NSD3Q9BZ95 1437 aa10.51□□□□□ -0.73
AMBRA1-206ENST00000528950 STK26Q9P289 416 aa10.51□□□□□ -0.73
AMBRA1-206ENST00000528950 ZNF518AQ6AHZ1 1483 aa10.51□□□□□ -0.73
AMBRA1-206ENST00000528950 SMARCA5O60264 1052 aaPredicted RBP10.51□□□□□ -0.73
AMBRA1-206ENST00000528950 CDC42BPAQ5VT25 1732 aa10.51□□□□□ -0.73
AMBRA1-206ENST00000528950 TMEM132EQ6IEE7 984 aa10.51□□□□□ -0.73
AMBRA1-206ENST00000528950 THUMPD2Q9BTF0 503 aaKnown RBP10.51□□□□□ -0.73
AMBRA1-206ENST00000528950 ZBTB40Q9NUA8 1239 aa10.51□□□□□ -0.73
AMBRA1-206ENST00000528950 NSFL1CQ9UNZ2 370 aaKnown RBP10.51□□□□□ -0.73
AMBRA1-206ENST00000528950 PREX2Q70Z35 1606 aa10.51□□□□□ -0.73
AMBRA1-206ENST00000528950 POGZQ7Z3K3 1410 aa10.51□□□□□ -0.73
AMBRA1-206ENST00000528950 VPS37CA5D8V6 355 aaPredicted RBP10.51□□□□□ -0.73
AMBRA1-206ENST00000528950 PPRC1Q5VV67 1664 aaKnown RBP10.51□□□□□ -0.73
AMBRA1-206ENST00000528950 KIF3BO15066 747 aa10.5□□□□□ -0.73
AMBRA1-206ENST00000528950 FIBPO43427 364 aa10.5□□□□□ -0.73
AMBRA1-206ENST00000528950 HCLS1P14317 486 aaPredicted RBP10.5□□□□□ -0.73
AMBRA1-206ENST00000528950 C16orf71Q8IYS4 520 aaPredicted RBP10.5□□□□□ -0.73
AMBRA1-206ENST00000528950 CDC42BPBQ9Y5S2 1711 aa10.5□□□□□ -0.73
AMBRA1-206ENST00000528950 CFAP74Q9C0B2 1584 aa10.5□□□□□ -0.73
AMBRA1-206ENST00000528950 ITSN2Q9NZM3 1697 aa10.5□□□□□ -0.73
AMBRA1-206ENST00000528950 TMPOP42166 694 aaKnown RBP10.5□□□□□ -0.73
AMBRA1-206ENST00000528950 SF3A1Q15459 793 aaKnown RBP10.5□□□□□ -0.73
AMBRA1-206ENST00000528950 BICD2Q8TD16 824 aa10.5□□□□□ -0.73
AMBRA1-206ENST00000528950 PRIMPOLQ96LW4 560 aa10.5□□□□□ -0.73
AMBRA1-206ENST00000528950 GTPBP4Q9BZE4 634 aaKnown RBP10.5□□□□□ -0.73
AMBRA1-206ENST00000528950 ARAP3Q8WWN8 1544 aa10.5□□□□□ -0.73
AMBRA1-206ENST00000528950 LETM1O95202 739 aaPredicted RBP10.49□□□□□ -0.73
AMBRA1-206ENST00000528950 YEATS2Q9ULM3 1422 aa10.49□□□□□ -0.73
AMBRA1-206ENST00000528950 ATP2B3Q16720 1220 aa10.49□□□□□ -0.73
AMBRA1-206ENST00000528950 BCL2L12Q9HB09 334 aa10.49□□□□□ -0.73
AMBRA1-206ENST00000528950 HMOX1P09601 288 aa10.48□□□□□ -0.73
AMBRA1-206ENST00000528950 UPF3BQ9BZI7 483 aaKnown RBP10.48□□□□□ -0.73
AMBRA1-206ENST00000528950 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.48□□□□□ -0.73
AMBRA1-206ENST00000528950 SAMD9LQ8IVG5 1584 aa10.48□□□□□ -0.73
AMBRA1-206ENST00000528950 FAM135AQ9P2D6 1515 aa10.48□□□□□ -0.73
AMBRA1-206ENST00000528950 SMC3Q9UQE7 1217 aa10.48□□□□□ -0.73
AMBRA1-206ENST00000528950 CCDC141Q6ZP82 1450 aa10.48□□□□□ -0.73
AMBRA1-206ENST00000528950 DDIT3P35638 169 aa10.48□□□□□ -0.73
AMBRA1-206ENST00000528950 HSP90B2PQ58FF3 399 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms