RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 DACH1Q9UI36 760 aa10.13□□□□□ -0.79
CTNND1-219ENST00000528621 MAGEC2Q9UBF1 373 aaPredicted RBP10.13□□□□□ -0.79
CTNND1-219ENST00000528621 FAM177BA6PVY3 158 aa10.12□□□□□ -0.79
CTNND1-219ENST00000528621 NFKBIBQ15653 356 aa10.12□□□□□ -0.79
CTNND1-219ENST00000528621 NBPF1Q3BBV0 1214 aa10.12□□□□□ -0.79
CTNND1-219ENST00000528621 FILIP1LQ4L180 1135 aa10.12□□□□□ -0.79
CTNND1-219ENST00000528621 FAM43AQ8N2R8 423 aa10.12□□□□□ -0.79
CTNND1-219ENST00000528621 CABP1Q9NZU7 370 aa10.12□□□□□ -0.79
CTNND1-219ENST00000528621 MTMR7Q9Y216 660 aa10.12□□□□□ -0.79
CTNND1-219ENST00000528621 FCHSD2O94868 740 aa10.12□□□□□ -0.79
CTNND1-219ENST00000528621 RDXP35241 583 aaKnown RBP10.12□□□□□ -0.79
CTNND1-219ENST00000528621 NASPP49321 788 aaPredicted RBP10.12□□□□□ -0.79
CTNND1-219ENST00000528621 JMYQ8N9B5 988 aa10.12□□□□□ -0.79
CTNND1-219ENST00000528621 CNKSR2Q8WXI2 1034 aa10.12□□□□□ -0.79
CTNND1-219ENST00000528621 MVPQ14764 893 aaKnown RBP10.12□□□□□ -0.79
CTNND1-219ENST00000528621 CDK13Q14004 1512 aaKnown RBP10.12□□□□□ -0.79
CTNND1-219ENST00000528621 CCDC173Q0VFZ6 552 aa10.12□□□□□ -0.79
CTNND1-219ENST00000528621 CAGE1Q8TC20 777 aa10.12□□□□□ -0.79
CTNND1-219ENST00000528621 TSR2Q969E8 191 aaKnown RBP10.12□□□□□ -0.79
CTNND1-219ENST00000528621 NACAP1Q9BZK3 213 aa10.12□□□□□ -0.79
CTNND1-219ENST00000528621 CYP46A1Q9Y6A2 500 aa10.12□□□□□ -0.79
CTNND1-219ENST00000528621 HDGFL1Q5TGJ6 251 aa10.11□□□□□ -0.79
CTNND1-219ENST00000528621 SULT6B1Q6IMI4 303 aa10.11□□□□□ -0.79
CTNND1-219ENST00000528621 TXLNBQ8N3L3 684 aa10.11□□□□□ -0.79
CTNND1-219ENST00000528621 KINO60870 393 aaKnown RBP10.11□□□□□ -0.79
CTNND1-219ENST00000528621 SDF4Q9BRK5 362 aa10.11□□□□□ -0.79
CTNND1-219ENST00000528621 HSP90AB2PQ58FF8 381 aa10.11□□□□□ -0.79
CTNND1-219ENST00000528621 ZSCAN31Q96LW9 406 aaPredicted RBP10.11□□□□□ -0.79
CTNND1-219ENST00000528621 CCDC69A6NI79 296 aa10.11□□□□□ -0.79
CTNND1-219ENST00000528621 SMC2O95347 1197 aa10.11□□□□□ -0.79
CTNND1-219ENST00000528621 R3HCC1Q9Y3T6 440 aaKnown RBP10.11□□□□□ -0.79
CTNND1-219ENST00000528621 RRP12Q5JTH9 1297 aaKnown RBP10.1□□□□□ -0.79
CTNND1-219ENST00000528621 NEK4P51957 841 aa10.1□□□□□ -0.79
CTNND1-219ENST00000528621 TOM1L2Q6ZVM7 507 aa10.1□□□□□ -0.79
CTNND1-219ENST00000528621 ANKLE2Q86XL3 938 aa10.1□□□□□ -0.79
CTNND1-219ENST00000528621 PATL2C9JE40 543 aaKnown RBP10.1□□□□□ -0.79
CTNND1-219ENST00000528621 ATF7IPQ6VMQ6 1270 aa10.1□□□□□ -0.79
CTNND1-219ENST00000528621 ABCC11Q96J66 1382 aa10.1□□□□□ -0.79
CTNND1-219ENST00000528621 ZNF530Q6P9A1 599 aaPredicted RBP10.1□□□□□ -0.79
CTNND1-219ENST00000528621 WDR33Q9C0J8 1336 aaKnown RBP10.09□□□□□ -0.79
CTNND1-219ENST00000528621 BTBD11A6QL63 1104 aa10.09□□□□□ -0.79
CTNND1-219ENST00000528621 MAP7D2Q96T17 732 aa10.09□□□□□ -0.79
CTNND1-219ENST00000528621 NSD3Q9BZ95 1437 aa10.09□□□□□ -0.79
CTNND1-219ENST00000528621 TRAK2O60296 914 aa10.09□□□□□ -0.79
CTNND1-219ENST00000528621 BCAR3O75815 825 aa10.09□□□□□ -0.79
CTNND1-219ENST00000528621 CDKL5O76039 1030 aa10.09□□□□□ -0.79
CTNND1-219ENST00000528621 NOM1Q5C9Z4 860 aaKnown RBP10.09□□□□□ -0.79
CTNND1-219ENST00000528621 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.09□□□□□ -0.791e-6■■■■■ 38.5
CTNND1-219ENST00000528621 CAVIN1Q6NZI2 390 aaKnown RBP10.09□□□□□ -0.79
CTNND1-219ENST00000528621 KCNH5Q8NCM2 988 aa10.09□□□□□ -0.79
CTNND1-219ENST00000528621 WWC2Q6AWC2 1192 aa10.09□□□□□ -0.79
CTNND1-219ENST00000528621 SLC12A5Q9H2X9 1139 aa10.09□□□□□ -0.79
CTNND1-219ENST00000528621 OFD1O75665 1012 aa10.09□□□□□ -0.79
CTNND1-219ENST00000528621 AKNAQ7Z591 1439 aa10.09□□□□□ -0.79
CTNND1-219ENST00000528621 K7ELQ4 463 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-219ENST00000528621 KRT32Q14532 448 aa10.08□□□□□ -0.8
CTNND1-219ENST00000528621 STK38Q15208 465 aa10.08□□□□□ -0.8
CTNND1-219ENST00000528621 TMEM132AQ24JP5 1023 aa10.08□□□□□ -0.8
CTNND1-219ENST00000528621 RPAP2Q8IXW5 612 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-219ENST00000528621 CTNNA3Q9UI47 895 aa10.08□□□□□ -0.8
CTNND1-219ENST00000528621 PRPF40AO75400 957 aaKnown RBP10.08□□□□□ -0.8
CTNND1-219ENST00000528621 MAP4K4O95819 1239 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-219ENST00000528621 CHD1LQ86WJ1 897 aa10.08□□□□□ -0.8
CTNND1-219ENST00000528621 WDR97A6NE52 1622 aa10.08□□□□□ -0.8
CTNND1-219ENST00000528621 MYL6BP14649 208 aa10.08□□□□□ -0.8
CTNND1-219ENST00000528621 NFE2L2Q16236 605 aa10.08□□□□□ -0.8
CTNND1-219ENST00000528621 NBPF8Q3BBV2 869 aa10.08□□□□□ -0.8
CTNND1-219ENST00000528621 CCAR1Q8IX12 1150 aaKnown RBP10.08□□□□□ -0.8
CTNND1-219ENST00000528621 TRIM22Q8IYM9 498 aa10.08□□□□□ -0.8
CTNND1-219ENST00000528621 TRIM5Q9C035 493 aa10.08□□□□□ -0.8
CTNND1-219ENST00000528621 FAM13BQ9NYF5 915 aa10.08□□□□□ -0.8
CTNND1-219ENST00000528621 BIVM-ERCC5R4GMW8 1640 aa10.08□□□□□ -0.8
CTNND1-219ENST00000528621 NAIPQ13075 1403 aa10.08□□□□□ -0.8
CTNND1-219ENST00000528621 KRT18P05783 430 aaKnown RBP10.08□□□□□ -0.8
CTNND1-219ENST00000528621 HSP90B2PQ58FF3 399 aa10.08□□□□□ -0.8
CTNND1-219ENST00000528621 SIL1Q9H173 461 aa10.08□□□□□ -0.8
CTNND1-219ENST00000528621 CIZ1Q9ULV3 898 aaPredicted RBP10.08□□□□□ -0.8
CTNND1-219ENST00000528621 NSD2O96028 1365 aa10.08□□□□□ -0.8
CTNND1-219ENST00000528621 CBFA2T2O43439 604 aa10.07□□□□□ -0.8
CTNND1-219ENST00000528621 RAB11FIP3O75154 756 aa10.07□□□□□ -0.8
CTNND1-219ENST00000528621 CCDC57Q2TAC2 916 aa10.07□□□□□ -0.8
CTNND1-219ENST00000528621 NOL7Q9UMY1 257 aaKnown RBP10.07□□□□□ -0.8
CTNND1-219ENST00000528621 THOC2Q8NI27 1593 aaKnown RBP10.07□□□□□ -0.8
CTNND1-219ENST00000528621 ALDH1L2Q3SY69 923 aa10.07□□□□□ -0.8
CTNND1-219ENST00000528621 WASF1Q92558 559 aa10.07□□□□□ -0.8
CTNND1-219ENST00000528621 AACSQ86V21 672 aa10.07□□□□□ -0.8
CTNND1-219ENST00000528621 DDX54Q8TDD1 881 aaKnown RBP10.06□□□□□ -0.8
CTNND1-219ENST00000528621 GNAT3A8MTJ3 354 aa10.06□□□□□ -0.8
CTNND1-219ENST00000528621 STIM1Q13586 685 aa10.06□□□□□ -0.8
CTNND1-219ENST00000528621 PPP6R1Q9UPN7 881 aa10.06□□□□□ -0.8
CTNND1-219ENST00000528621 ARHGEF11O15085 1522 aa10.06□□□□□ -0.8
CTNND1-219ENST00000528621 CCDC192P0DO97 292 aa10.06□□□□□ -0.8
CTNND1-219ENST00000528621 STK3Q13188 491 aa10.06□□□□□ -0.8
CTNND1-219ENST00000528621 SYCP1Q15431 976 aa10.06□□□□□ -0.8
CTNND1-219ENST00000528621 NCOA1Q15788 1441 aa10.06□□□□□ -0.8
CTNND1-219ENST00000528621 ZFYVE27Q5T4F4 411 aa10.06□□□□□ -0.8
CTNND1-219ENST00000528621 LUC7LQ9NQ29 371 aaKnown RBP10.06□□□□□ -0.8
CTNND1-219ENST00000528621 PDRG1Q9NUG6 133 aa10.06□□□□□ -0.8
CTNND1-219ENST00000528621 DCTN1Q14203 1278 aa10.05□□□□□ -0.8
CTNND1-219ENST00000528621 RRS1Q15050 365 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms