RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 PTMAP06454 111 aaKnown RBP5.04□□□□□ -1.6
PTPN22-207ENST00000528414 MMP14P50281 582 aa5.04□□□□□ -1.6
PTPN22-207ENST00000528414 C4AP0C0L4 1744 aa5.04□□□□□ -1.6
PTPN22-207ENST00000528414 C4BP0C0L5 1744 aa5.04□□□□□ -1.6
PTPN22-207ENST00000528414 CDCA8Q53HL2 280 aa5.04□□□□□ -1.6
PTPN22-207ENST00000528414 PRDM4Q9UKN5 801 aa5.04□□□□□ -1.6
PTPN22-207ENST00000528414 RIMS2Q9UQ26 1411 aa5.04□□□□□ -1.6
PTPN22-207ENST00000528414 HSP90AB4PQ58FF6 505 aa5.03□□□□□ -1.6
PTPN22-207ENST00000528414 TMCO4Q5TGY1 634 aa5.03□□□□□ -1.6
PTPN22-207ENST00000528414 AEBP1Q8IUX7 1158 aa5.03□□□□□ -1.6
PTPN22-207ENST00000528414 MSH6P52701 1360 aa5.03□□□□□ -1.6
PTPN22-207ENST00000528414 CCNB3Q8WWL7 1395 aa5.03□□□□□ -1.6
PTPN22-207ENST00000528414 NEFMP07197 916 aa5.03□□□□□ -1.6
PTPN22-207ENST00000528414 NEUROD2Q15784 382 aa5.03□□□□□ -1.6
PTPN22-207ENST00000528414 COL5A3P25940 1745 aaPredicted RBP5.03□□□□□ -1.6
PTPN22-207ENST00000528414 NAIPQ13075 1403 aa5.03□□□□□ -1.6
PTPN22-207ENST00000528414 RPGRIP1LQ68CZ1 1315 aa5.03□□□□□ -1.6
PTPN22-207ENST00000528414 CCDC82Q8N4S0 544 aa5.03□□□□□ -1.6
PTPN22-207ENST00000528414 ADCY9O60503 1353 aa5.02□□□□□ -1.61
PTPN22-207ENST00000528414 AFDNP55196 1824 aaKnown RBP5.02□□□□□ -1.61
PTPN22-207ENST00000528414 IFNLR1Q8IU57 520 aaPredicted RBP5.02□□□□□ -1.61
PTPN22-207ENST00000528414 FAM9BQ8IZU0 186 aa5.02□□□□□ -1.61
PTPN22-207ENST00000528414 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.02□□□□□ -1.61
PTPN22-207ENST00000528414 GZF1Q9H116 711 aaPredicted RBP5.02□□□□□ -1.61
PTPN22-207ENST00000528414 ADAMTSL1Q8N6G6 1762 aa5.02□□□□□ -1.61
PTPN22-207ENST00000528414 SMG6Q86US8 1419 aaKnown RBP5.02□□□□□ -1.61
PTPN22-207ENST00000528414 EIF3AQ14152 1382 aaKnown RBP5.02□□□□□ -1.61
PTPN22-207ENST00000528414 FOXD4L6Q3SYB3 417 aaPredicted RBP5.01□□□□□ -1.61
PTPN22-207ENST00000528414 FOXD4L3Q6VB84 417 aaPredicted RBP5.01□□□□□ -1.61
PTPN22-207ENST00000528414 ZC3H4Q9UPT8 1303 aaKnown RBP5.01□□□□□ -1.61
PTPN22-207ENST00000528414 PHF14O94880 888 aa5.01□□□□□ -1.61
PTPN22-207ENST00000528414 CANXP27824 592 aaKnown RBP5.01□□□□□ -1.61
PTPN22-207ENST00000528414 NME8Q8N427 588 aa5.01□□□□□ -1.61
PTPN22-207ENST00000528414 NCAPD2Q15021 1401 aa5.01□□□□□ -1.61
PTPN22-207ENST00000528414 PIK3C2GO75747 1445 aa5□□□□□ -1.61
PTPN22-207ENST00000528414 VGFO15240 615 aaPredicted RBP5□□□□□ -1.61
PTPN22-207ENST00000528414 TOGARAM1Q9Y4F4 1720 aa5□□□□□ -1.61
PTPN22-207ENST00000528414 PATL2C9JE40 543 aaKnown RBP5□□□□□ -1.61
PTPN22-207ENST00000528414 IL27Q8NEV9 243 aa5□□□□□ -1.61
PTPN22-207ENST00000528414 EVI5LQ96CN4 794 aa5□□□□□ -1.61
PTPN22-207ENST00000528414 ZNF830Q96NB3 372 aaPredicted RBP5□□□□□ -1.61
PTPN22-207ENST00000528414 CPDO75976 1380 aa4.99□□□□□ -1.61
PTPN22-207ENST00000528414 DICER1Q9UPY3 1922 aaKnown RBP4.99□□□□□ -1.61
PTPN22-207ENST00000528414 SOX12O15370 315 aa4.99□□□□□ -1.61
PTPN22-207ENST00000528414 SMARCA5O60264 1052 aaPredicted RBP4.99□□□□□ -1.61
PTPN22-207ENST00000528414 SPTY2D1Q68D10 685 aaPredicted RBP4.99□□□□□ -1.61
PTPN22-207ENST00000528414 NCKAP5LQ9HCH0 1330 aa4.99□□□□□ -1.61
PTPN22-207ENST00000528414 SPATA31E1Q6ZUB1 1445 aa4.99□□□□□ -1.61
PTPN22-207ENST00000528414 MAP2P11137 1827 aaKnown RBP4.99□□□□□ -1.61
PTPN22-207ENST00000528414 LRPPRCP42704 1394 aaKnown RBP4.98□□□□□ -1.61
PTPN22-207ENST00000528414 IRF5Q13568 498 aa4.98□□□□□ -1.61
PTPN22-207ENST00000528414 SH3BP1Q9Y3L3 701 aa4.98□□□□□ -1.61
PTPN22-207ENST00000528414 RPS6KL1Q9Y6S9 549 aa4.98□□□□□ -1.61
PTPN22-207ENST00000528414 ZNF622Q969S3 477 aaKnown RBP eCLIP4.98□□□□□ -1.61
PTPN22-207ENST00000528414 UNCXA6NJT0 531 aa4.97□□□□□ -1.61
PTPN22-207ENST00000528414 PSEN1P49768 467 aa4.97□□□□□ -1.61
PTPN22-207ENST00000528414 TNS3Q68CZ2 1445 aa4.97□□□□□ -1.61
PTPN22-207ENST00000528414 KANK1Q14678 1352 aa4.97□□□□□ -1.61
PTPN22-207ENST00000528414 ABCC11Q96J66 1382 aa4.97□□□□□ -1.61
PTPN22-207ENST00000528414 CLGNO14967 610 aa4.97□□□□□ -1.61
PTPN22-207ENST00000528414 SUGT1Q9Y2Z0 365 aa4.97□□□□□ -1.61
PTPN22-207ENST00000528414 RBM6P78332 1123 aaKnown RBP4.97□□□□□ -1.61
PTPN22-207ENST00000528414 MKRN3Q13064 507 aaKnown RBP4.97□□□□□ -1.61
PTPN22-207ENST00000528414 POTEAQ6S8J7 498 aa4.97□□□□□ -1.61
PTPN22-207ENST00000528414 PPP4R3CPQ6ZMV5 832 aa4.97□□□□□ -1.61
PTPN22-207ENST00000528414 UBAP1LF5GYI3 381 aa4.96□□□□□ -1.62
PTPN22-207ENST00000528414 BCORQ6W2J9 1755 aa4.96□□□□□ -1.62
PTPN22-207ENST00000528414 TESPA1A2RU30 521 aaPredicted RBP4.95□□□□□ -1.62
PTPN22-207ENST00000528414 MSH5O43196 834 aa4.95□□□□□ -1.62
PTPN22-207ENST00000528414 CNGB1Q14028 1251 aaPredicted RBP4.95□□□□□ -1.62
PTPN22-207ENST00000528414 TSHZ1Q6ZSZ6 1077 aa4.95□□□□□ -1.62
PTPN22-207ENST00000528414 DHX57Q6P158 1386 aaKnown RBP4.95□□□□□ -1.62
PTPN22-207ENST00000528414 MARCH6O60337 910 aa4.95□□□□□ -1.62
PTPN22-207ENST00000528414 MYCNP04198 464 aaPredicted RBP4.95□□□□□ -1.62
PTPN22-207ENST00000528414 HSPA2P54652 639 aa4.95□□□□□ -1.62
PTPN22-207ENST00000528414 LMOD2Q6P5Q4 547 aa4.95□□□□□ -1.62
PTPN22-207ENST00000528414 GPBP1L1Q9HC44 474 aaPredicted RBP4.95□□□□□ -1.62
PTPN22-207ENST00000528414 SLC24A3Q9HC58 644 aa4.95□□□□□ -1.62
PTPN22-207ENST00000528414 TERF2IPQ9NYB0 399 aa4.95□□□□□ -1.62
PTPN22-207ENST00000528414 INSRP06213 1382 aa4.95□□□□□ -1.62
PTPN22-207ENST00000528414 NFAT5O94916 1531 aa4.95□□□□□ -1.62
PTPN22-207ENST00000528414 RINLQ6ZS11 566 aa4.94□□□□□ -1.62
PTPN22-207ENST00000528414 PLCD3Q8N3E9 789 aa4.94□□□□□ -1.62
PTPN22-207ENST00000528414 NSD3Q9BZ95 1437 aa4.94□□□□□ -1.62
PTPN22-207ENST00000528414 SPATA32Q96LK8 384 aa4.94□□□□□ -1.62
PTPN22-207ENST00000528414 SPINK5Q9NQ38 1064 aaPredicted RBP4.94□□□□□ -1.62
PTPN22-207ENST00000528414 PPME1Q9Y570 386 aa4.94□□□□□ -1.62
PTPN22-207ENST00000528414 ANKRD30AQ9BXX3 1397 aa4.94□□□□□ -1.62
PTPN22-207ENST00000528414 ARHGEF10O15013 1369 aa4.94□□□□□ -1.62
PTPN22-207ENST00000528414 RGL2O15211 777 aa4.94□□□□□ -1.62
PTPN22-207ENST00000528414 HMGB2P26583 209 aaKnown RBP4.94□□□□□ -1.62
PTPN22-207ENST00000528414 HDGFP51858 240 aaKnown RBP4.94□□□□□ -1.62
PTPN22-207ENST00000528414 CCDC96Q2M329 555 aa4.94□□□□□ -1.62
PTPN22-207ENST00000528414 DNAJC14Q6Y2X3 702 aaPredicted RBP4.94□□□□□ -1.62
PTPN22-207ENST00000528414 NOL8Q76FK4 1167 aaKnown RBP4.94□□□□□ -1.62
PTPN22-207ENST00000528414 SSH2Q76I76 1423 aa4.94□□□□□ -1.62
PTPN22-207ENST00000528414 CADPS2Q86UW7 1296 aa4.94□□□□□ -1.62
PTPN22-207ENST00000528414 UBR3Q6ZT12 1888 aa4.93□□□□□ -1.62
PTPN22-207ENST00000528414 BTAF1O14981 1849 aa4.93□□□□□ -1.62
PTPN22-207ENST00000528414 POLR3AO14802 1390 aaPredicted RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms