RNA–Protein interactions for RNA: ENST00000528021.5

SDHD-204, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3 BASIC

Gene SDHD, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-204ENST00000528021 TMC1Q8TDI8 760 aa17.01■□□□□ 0.31
SDHD-204ENST00000528021 POLR3AO14802 1390 aaPredicted RBP17.01■□□□□ 0.31
SDHD-204ENST00000528021 ATAD2Q6PL18 1390 aa17.01■□□□□ 0.31
SDHD-204ENST00000528021 KIF1AQ12756 1690 aa17.01■□□□□ 0.31
SDHD-204ENST00000528021 TRPM1Q7Z4N2 1603 aa17■□□□□ 0.31
SDHD-204ENST00000528021 TRPC5Q9UL62 973 aaPredicted RBP17■□□□□ 0.31
SDHD-204ENST00000528021 ARHGEF28Q8N1W1 1705 aaKnown RBP16.99■□□□□ 0.31
SDHD-204ENST00000528021 NUTM2GQ5VZR2 741 aa16.99■□□□□ 0.31
SDHD-204ENST00000528021 RBM6P78332 1123 aaKnown RBP16.98■□□□□ 0.31
SDHD-204ENST00000528021 NLRP13Q86W25 1043 aa16.98■□□□□ 0.31
SDHD-204ENST00000528021 IFNL1Q8IU54 200 aa16.98■□□□□ 0.31
SDHD-204ENST00000528021 PUS7Q96PZ0 661 aaKnown RBP16.98■□□□□ 0.31
SDHD-204ENST00000528021 SBNO2Q9Y2G9 1366 aa16.98■□□□□ 0.31
SDHD-204ENST00000528021 TMF1P82094 1093 aa16.97■□□□□ 0.31
SDHD-204ENST00000528021 BRD4O60885 1362 aaPredicted RBP16.97■□□□□ 0.31
SDHD-204ENST00000528021 HDGFL2Q7Z4V5 671 aaPredicted RBP16.96■□□□□ 0.31
SDHD-204ENST00000528021 UNC5CLQ8IV45 518 aa16.96■□□□□ 0.31
SDHD-204ENST00000528021 USP32Q8NFA0 1604 aa16.96■□□□□ 0.3
SDHD-204ENST00000528021 USP47Q96K76 1375 aa16.95■□□□□ 0.3
SDHD-204ENST00000528021 NLRP6P59044 892 aa16.95■□□□□ 0.3
SDHD-204ENST00000528021 CDCA8Q53HL2 280 aa16.95■□□□□ 0.3
SDHD-204ENST00000528021 TERF2IPQ9NYB0 399 aa16.95■□□□□ 0.3
SDHD-204ENST00000528021 FAM83GA6ND36 823 aa16.94■□□□□ 0.3
SDHD-204ENST00000528021 TESK2Q96S53 571 aa16.94■□□□□ 0.3
SDHD-204ENST00000528021 TMEM106CQ9BVX2 250 aa16.94■□□□□ 0.3
SDHD-204ENST00000528021 PRDM11Q9NQV5 511 aa16.94■□□□□ 0.3
SDHD-204ENST00000528021 CCDC9Q9Y3X0 531 aaKnown RBP16.94■□□□□ 0.3
SDHD-204ENST00000528021 SLC12A5Q9H2X9 1139 aa16.93■□□□□ 0.3
SDHD-204ENST00000528021 ZC3H6P61129 1189 aaKnown RBP16.91■□□□□ 0.3
SDHD-204ENST00000528021 GJD4Q96KN9 370 aaPredicted RBP16.91■□□□□ 0.3
SDHD-204ENST00000528021 TTC21BQ7Z4L5 1316 aa16.91■□□□□ 0.3
SDHD-204ENST00000528021 KTN1Q86UP2 1357 aaKnown RBP16.9■□□□□ 0.3
SDHD-204ENST00000528021 EIF4G2P78344 907 aaKnown RBP eCLIP16.9■□□□□ 0.3
SDHD-204ENST00000528021 BTG4Q9NY30 223 aa16.9■□□□□ 0.3
SDHD-204ENST00000528021 TTC21AQ8NDW8 1320 aa16.9■□□□□ 0.3
SDHD-204ENST00000528021 COL22A1Q8NFW1 1626 aaPredicted RBP16.89■□□□□ 0.29
SDHD-204ENST00000528021 USP6P35125 1406 aa16.89■□□□□ 0.29
SDHD-204ENST00000528021 GCP02774 474 aa16.89■□□□□ 0.29
SDHD-204ENST00000528021 PLCG2P16885 1265 aa16.89■□□□□ 0.29
SDHD-204ENST00000528021 EVA1CP58658 441 aa16.89■□□□□ 0.29
SDHD-204ENST00000528021 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.89■□□□□ 0.29
SDHD-204ENST00000528021 QRICH2Q9H0J4 1663 aa16.88■□□□□ 0.29
SDHD-204ENST00000528021 ZBTB7CA1YPR0 619 aa16.88■□□□□ 0.29
SDHD-204ENST00000528021 VPS72Q15906 364 aa16.88■□□□□ 0.29
SDHD-204ENST00000528021 SLAIN1Q8ND83 568 aa16.87■□□□□ 0.29
SDHD-204ENST00000528021 BCL9LQ86UU0 1499 aa16.86■□□□□ 0.29
SDHD-204ENST00000528021 CHRNA2Q15822 529 aa16.86■□□□□ 0.29
SDHD-204ENST00000528021 KCNH5Q8NCM2 988 aa16.86■□□□□ 0.29
SDHD-204ENST00000528021 RGPD8O14715 1765 aaPredicted RBP16.86■□□□□ 0.29
SDHD-204ENST00000528021 KIAA0232Q92628 1395 aa16.86■□□□□ 0.29
SDHD-204ENST00000528021 POLR3GLQ9BT43 218 aa16.85■□□□□ 0.29
SDHD-204ENST00000528021 USP19O94966 1318 aa16.85■□□□□ 0.29
SDHD-204ENST00000528021 NINLQ9Y2I6 1382 aa16.85■□□□□ 0.29
SDHD-204ENST00000528021 ATRNO75882 1429 aa16.85■□□□□ 0.29
SDHD-204ENST00000528021 CPSF1Q10570 1443 aaKnown RBP16.85■□□□□ 0.29
SDHD-204ENST00000528021 FKBP8Q14318 412 aa16.84■□□□□ 0.29
SDHD-204ENST00000528021 STRN4Q9NRL3 753 aa16.84■□□□□ 0.29
SDHD-204ENST00000528021 SLIT2O94813 1529 aa16.84■□□□□ 0.29
SDHD-204ENST00000528021 A0A0G2JS52 829 aa16.83■□□□□ 0.28
SDHD-204ENST00000528021 SOX12O15370 315 aa16.83■□□□□ 0.28
SDHD-204ENST00000528021 HSPA5P11021 654 aaKnown RBP16.83■□□□□ 0.28
SDHD-204ENST00000528021 MYT1Q01538 1121 aa16.83■□□□□ 0.28
SDHD-204ENST00000528021 ITSN1Q15811 1721 aa16.83■□□□□ 0.28
SDHD-204ENST00000528021 SSH2Q76I76 1423 aa16.82■□□□□ 0.28
SDHD-204ENST00000528021 CDK12Q9NYV4 1490 aaPredicted RBP16.81■□□□□ 0.28
SDHD-204ENST00000528021 IRX5P78411 483 aaPredicted RBP16.81■□□□□ 0.28
SDHD-204ENST00000528021 NME9Q86XW9 330 aa16.81■□□□□ 0.28
SDHD-204ENST00000528021 CDAN1Q8IWY9 1227 aa16.81■□□□□ 0.28
SDHD-204ENST00000528021 CPDO75976 1380 aa16.79■□□□□ 0.28
SDHD-204ENST00000528021 SEPT12Q8IYM1 358 aa16.79■□□□□ 0.28
SDHD-204ENST00000528021 TRPM3Q9HCF6 1732 aaPredicted RBP16.79■□□□□ 0.28
SDHD-204ENST00000528021 TOPAZ1Q8N9V7 1692 aa16.78■□□□□ 0.28
SDHD-204ENST00000528021 A0A1W2PP64 1363 aa16.78■□□□□ 0.28
SDHD-204ENST00000528021 DCAF8Q5TAQ9 597 aa16.78■□□□□ 0.28
SDHD-204ENST00000528021 COG3Q96JB2 828 aa16.78■□□□□ 0.28
SDHD-204ENST00000528021 EDC4Q6P2E9 1401 aaKnown RBP16.78■□□□□ 0.28
SDHD-204ENST00000528021 FAM98CQ17RN3 349 aaKnown RBP16.77■□□□□ 0.28
SDHD-204ENST00000528021 SPATA31A5Q5VU36 1347 aa16.76■□□□□ 0.27
SDHD-204ENST00000528021 SPATA31A7Q8IWB4 1347 aa16.76■□□□□ 0.27
SDHD-204ENST00000528021 ONECUT3O60422 494 aaPredicted RBP16.76■□□□□ 0.27
SDHD-204ENST00000528021 ARHGEF25Q86VW2 580 aa16.76■□□□□ 0.27
SDHD-204ENST00000528021 OCEL1Q9H607 264 aa16.76■□□□□ 0.27
SDHD-204ENST00000528021 USP35Q9P2H5 1018 aa16.76■□□□□ 0.27
SDHD-204ENST00000528021 RGS12O14924 1447 aa16.76■□□□□ 0.27
SDHD-204ENST00000528021 USP31Q70CQ4 1352 aa16.76■□□□□ 0.27
SDHD-204ENST00000528021 ANKRD36BQ8N2N9 1353 aa16.76■□□□□ 0.27
SDHD-204ENST00000528021 ALS2Q96Q42 1657 aa16.75■□□□□ 0.27
SDHD-204ENST00000528021 ST18O60284 1047 aa16.75■□□□□ 0.27
SDHD-204ENST00000528021 UPF1Q92900 1129 aaKnown RBP eCLIP16.75■□□□□ 0.271e-6■□□□□ 9.2
SDHD-204ENST00000528021 AATKQ6ZMQ8 1374 aa16.75■□□□□ 0.27
SDHD-204ENST00000528021 CSB-PGBD3P0DP91 1061 aa16.74■□□□□ 0.27
SDHD-204ENST00000528021 LARP1Q6PKG0 1096 aaKnown RBP16.74■□□□□ 0.27
SDHD-204ENST00000528021 CD163L1Q9NR16 1453 aa16.73■□□□□ 0.27
SDHD-204ENST00000528021 TOM1L2Q6ZVM7 507 aa16.73■□□□□ 0.27
SDHD-204ENST00000528021 KRT27Q7Z3Y8 459 aa16.73■□□□□ 0.27
SDHD-204ENST00000528021 SPATA31A1Q5TZJ5 1347 aa16.72■□□□□ 0.27
SDHD-204ENST00000528021 TCP11L2Q8N4U5 519 aa16.72■□□□□ 0.27
SDHD-204ENST00000528021 FBXO3Q9UK99 471 aa16.72■□□□□ 0.27
SDHD-204ENST00000528021 FYB1O15117 783 aa16.71■□□□□ 0.27
SDHD-204ENST00000528021 PYGBP11216 843 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms