RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 RIMS1Q86UR5 1692 aaKnown RBP19.58■□□□□ 0.73
USH1C-207ENST00000527720 PTCH1Q13635 1447 aa19.58■□□□□ 0.72
USH1C-207ENST00000527720 HMOX1P09601 288 aa19.58■□□□□ 0.72
USH1C-207ENST00000527720 PHACTR3Q96KR7 559 aa19.58■□□□□ 0.72
USH1C-207ENST00000527720 OVOS2A0A0J9YW53 1432 aa19.57■□□□□ 0.72
USH1C-207ENST00000527720 OVOS2Q6IE36 1432 aa19.57■□□□□ 0.72
USH1C-207ENST00000527720 PTPRUQ92729 1446 aa19.57■□□□□ 0.72
USH1C-207ENST00000527720 GNAI1P63096 354 aa19.57■□□□□ 0.72
USH1C-207ENST00000527720 IFT57Q9NWB7 429 aa19.57■□□□□ 0.72
USH1C-207ENST00000527720 TTC21BQ7Z4L5 1316 aa19.57■□□□□ 0.72
USH1C-207ENST00000527720 NOB1Q9ULX3 412 aaKnown RBP19.56■□□□□ 0.72
USH1C-207ENST00000527720 USP6P35125 1406 aa19.56■□□□□ 0.72
USH1C-207ENST00000527720 TBX22Q9Y458 520 aa19.55■□□□□ 0.72
USH1C-207ENST00000527720 ACEP12821 1306 aa19.55■□□□□ 0.72
USH1C-207ENST00000527720 HDAC1Q13547 482 aaPredicted RBP19.55■□□□□ 0.72
USH1C-207ENST00000527720 PDZRN3Q9UPQ7 1066 aa19.54■□□□□ 0.72
USH1C-207ENST00000527720 ZNF853P0CG23 659 aa19.54■□□□□ 0.72
USH1C-207ENST00000527720 NBR1Q14596 966 aa19.54■□□□□ 0.72
USH1C-207ENST00000527720 RRS1Q15050 365 aaKnown RBP19.54■□□□□ 0.72
USH1C-207ENST00000527720 RGPD1P0DJD0 1748 aa19.53■□□□□ 0.72
USH1C-207ENST00000527720 ITPRIPQ8IWB1 547 aa19.53■□□□□ 0.72
USH1C-207ENST00000527720 USP31Q70CQ4 1352 aa19.52■□□□□ 0.72
USH1C-207ENST00000527720 FMN2Q9NZ56 1722 aa19.52■□□□□ 0.72
USH1C-207ENST00000527720 SSH2Q76I76 1423 aa19.52■□□□□ 0.72
USH1C-207ENST00000527720 CEBPAP49715 358 aaPredicted RBP19.52■□□□□ 0.72
USH1C-207ENST00000527720 ARHGAP45Q92619 1136 aa19.52■□□□□ 0.72
USH1C-207ENST00000527720 XRN1Q8IZH2 1706 aaKnown RBP19.52■□□□□ 0.72
USH1C-207ENST00000527720 RTL5Q5HYW3 569 aaPredicted RBP19.51■□□□□ 0.71
USH1C-207ENST00000527720 PEAK1Q9H792 1746 aa19.51■□□□□ 0.71
USH1C-207ENST00000527720 RGPD8O14715 1765 aaPredicted RBP19.5■□□□□ 0.71
USH1C-207ENST00000527720 THEMISQ8N1K5 641 aaPredicted RBP19.5■□□□□ 0.71
USH1C-207ENST00000527720 TMEM57Q8N5G2 664 aa19.5■□□□□ 0.71
USH1C-207ENST00000527720 CFAP44Q96MT7 982 aa19.5■□□□□ 0.71
USH1C-207ENST00000527720 CHMP4BQ9H444 224 aaKnown RBP19.5■□□□□ 0.71
USH1C-207ENST00000527720 USP35Q9P2H5 1018 aa19.5■□□□□ 0.71
USH1C-207ENST00000527720 DAXXQ9UER7 740 aaPredicted RBP19.5■□□□□ 0.71
USH1C-207ENST00000527720 TTC21AQ8NDW8 1320 aa19.5■□□□□ 0.71
USH1C-207ENST00000527720 VAMP4O75379 141 aa19.5■□□□□ 0.71
USH1C-207ENST00000527720 ZBTB40Q9NUA8 1239 aa19.5■□□□□ 0.71
USH1C-207ENST00000527720 AMOTL2Q9Y2J4 779 aa19.5■□□□□ 0.71
USH1C-207ENST00000527720 LAS1LQ9Y4W2 734 aaKnown RBP19.5■□□□□ 0.71
USH1C-207ENST00000527720 SLC26A8Q96RN1 970 aa19.49■□□□□ 0.71
USH1C-207ENST00000527720 PIK3R4Q99570 1358 aa19.49■□□□□ 0.71
USH1C-207ENST00000527720 MBIPQ9NS73 344 aa19.48■□□□□ 0.71
USH1C-207ENST00000527720 EIF4A2Q14240 407 aaKnown RBP19.47■□□□□ 0.71
USH1C-207ENST00000527720 MRPL50Q8N5N7 158 aaKnown RBP19.47■□□□□ 0.71
USH1C-207ENST00000527720 SMC5Q8IY18 1101 aa19.46■□□□□ 0.71
USH1C-207ENST00000527720 USP19O94966 1318 aa19.46■□□□□ 0.71
USH1C-207ENST00000527720 THUMPD2Q9BTF0 503 aaKnown RBP19.46■□□□□ 0.71
USH1C-207ENST00000527720 ANKARQ7Z5J8 1434 aa19.45■□□□□ 0.7
USH1C-207ENST00000527720 USP54Q70EL1 1684 aa19.44■□□□□ 0.7
USH1C-207ENST00000527720 TWISTNBQ3B726 338 aaPredicted RBP19.44■□□□□ 0.7
USH1C-207ENST00000527720 HAP1P54257 671 aaPredicted RBP19.43■□□□□ 0.7
USH1C-207ENST00000527720 ARHGEF10O15013 1369 aa19.43■□□□□ 0.7
USH1C-207ENST00000527720 SULT6B1Q6IMI4 303 aa19.42■□□□□ 0.7
USH1C-207ENST00000527720 TSPYL6Q8N831 410 aa19.42■□□□□ 0.7
USH1C-207ENST00000527720 UPF2Q9HAU5 1272 aaKnown RBP19.42■□□□□ 0.7
USH1C-207ENST00000527720 PIK3C2AO00443 1686 aa19.42■□□□□ 0.7
USH1C-207ENST00000527720 CEP170BQ9Y4F5 1589 aaPredicted RBP19.42■□□□□ 0.7
USH1C-207ENST00000527720 NUTM2FA1L443 756 aa19.41■□□□□ 0.7
USH1C-207ENST00000527720 ABCC4O15439 1325 aa19.41■□□□□ 0.7
USH1C-207ENST00000527720 SBNO1A3KN83 1393 aa19.4■□□□□ 0.7
USH1C-207ENST00000527720 SEC24BO95487 1268 aa19.4■□□□□ 0.7
USH1C-207ENST00000527720 KIF24Q5T7B8 1368 aa19.4■□□□□ 0.7
USH1C-207ENST00000527720 DEKP35659 375 aaKnown RBP19.4■□□□□ 0.7
USH1C-207ENST00000527720 FLT4P35916 1363 aa19.39■□□□□ 0.7
USH1C-207ENST00000527720 ZBTB7BO15156 539 aaPredicted RBP19.39■□□□□ 0.69
USH1C-207ENST00000527720 AEBP1Q8IUX7 1158 aa19.39■□□□□ 0.69
USH1C-207ENST00000527720 API5Q9BZZ5 524 aaKnown RBP19.39■□□□□ 0.69
USH1C-207ENST00000527720 FAM83GA6ND36 823 aa19.39■□□□□ 0.69
USH1C-207ENST00000527720 HSP90AB2PQ58FF8 381 aa19.39■□□□□ 0.69
USH1C-207ENST00000527720 C8orf58Q8NAV2 365 aa19.39■□□□□ 0.69
USH1C-207ENST00000527720 NGDNQ8NEJ9 315 aaKnown RBP19.38■□□□□ 0.69
USH1C-207ENST00000527720 KIAA0232Q92628 1395 aa19.38■□□□□ 0.69
USH1C-207ENST00000527720 CHD2O14647 1828 aaKnown RBP19.38■□□□□ 0.69
USH1C-207ENST00000527720 MARF1Q9Y4F3 1742 aaKnown RBP19.37■□□□□ 0.69
USH1C-207ENST00000527720 NUCB1Q02818 461 aa19.37■□□□□ 0.69
USH1C-207ENST00000527720 MAP3K19Q56UN5 1328 aa19.37■□□□□ 0.69
USH1C-207ENST00000527720 ZNF142P52746 1687 aaPredicted RBP19.36■□□□□ 0.69
USH1C-207ENST00000527720 CHL1O00533 1208 aa19.36■□□□□ 0.69
USH1C-207ENST00000527720 SLC4A3P48751 1232 aa19.36■□□□□ 0.69
USH1C-207ENST00000527720 BECN1Q14457 450 aa19.36■□□□□ 0.69
USH1C-207ENST00000527720 TBC1D32Q96NH3 1257 aa19.36■□□□□ 0.69
USH1C-207ENST00000527720 KDRP35968 1356 aa19.36■□□□□ 0.69
USH1C-207ENST00000527720 GCC1Q96CN9 775 aa19.36■□□□□ 0.69
USH1C-207ENST00000527720 DCTN1Q14203 1278 aa19.35■□□□□ 0.69
USH1C-207ENST00000527720 ELL2O00472 640 aaPredicted RBP19.35■□□□□ 0.69
USH1C-207ENST00000527720 CRB1P82279 1406 aa19.33■□□□□ 0.68
USH1C-207ENST00000527720 PLPPR3Q6T4P5 718 aa19.32■□□□□ 0.68
USH1C-207ENST00000527720 CHD1LQ86WJ1 897 aa19.32■□□□□ 0.68
USH1C-207ENST00000527720 IGSF1Q8N6C5 1336 aa19.32■□□□□ 0.68
USH1C-207ENST00000527720 KCNA6P17658 529 aa19.31■□□□□ 0.68
USH1C-207ENST00000527720 AMPHP49418 695 aa19.3■□□□□ 0.68
USH1C-207ENST00000527720 LRRC37A3O60309 1634 aa19.3■□□□□ 0.68
USH1C-207ENST00000527720 NFKBIBQ15653 356 aa19.29■□□□□ 0.68
USH1C-207ENST00000527720 INTS3Q68E01 1043 aaKnown RBP19.29■□□□□ 0.68
USH1C-207ENST00000527720 MCM10Q7L590 875 aa19.29■□□□□ 0.68
USH1C-207ENST00000527720 CACNA1FO60840 1977 aa19.29■□□□□ 0.68
USH1C-207ENST00000527720 SETD1BQ9UPS6 1966 aaKnown RBP19.29■□□□□ 0.68
USH1C-207ENST00000527720 PTPRCP08575 1304 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms