RNA–Protein interactions for RNA: ENST00000526955.1

PKNOX2-202, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 1 (best)

Gene PKNOX2, Length 4,531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-202ENST00000526955 NLRP6P59044 892 aa12.57□□□□□ -0.4
PKNOX2-202ENST00000526955 NUCB1Q02818 461 aa12.57□□□□□ -0.4
PKNOX2-202ENST00000526955 TSR2Q969E8 191 aaKnown RBP12.57□□□□□ -0.4
PKNOX2-202ENST00000526955 RBM33Q96EV2 1170 aaKnown RBP12.57□□□□□ -0.4
PKNOX2-202ENST00000526955 MCM5P33992 734 aa12.56□□□□□ -0.4
PKNOX2-202ENST00000526955 INTS3Q68E01 1043 aaKnown RBP12.56□□□□□ -0.4
PKNOX2-202ENST00000526955 AMOTL1Q8IY63 956 aa12.56□□□□□ -0.4
PKNOX2-202ENST00000526955 TMEM57Q8N5G2 664 aa12.56□□□□□ -0.4
PKNOX2-202ENST00000526955 OFD1O75665 1012 aa12.56□□□□□ -0.4
PKNOX2-202ENST00000526955 SSH1Q8WYL5 1049 aa12.56□□□□□ -0.4
PKNOX2-202ENST00000526955 TOMM22Q9NS69 142 aa12.56□□□□□ -0.4
PKNOX2-202ENST00000526955 MBD3O95983 291 aa12.56□□□□□ -0.4
PKNOX2-202ENST00000526955 CARD14Q9BXL6 1004 aa12.56□□□□□ -0.4
PKNOX2-202ENST00000526955 API5Q9BZZ5 524 aaKnown RBP12.56□□□□□ -0.4
PKNOX2-202ENST00000526955 SLC12A5Q9H2X9 1139 aa12.56□□□□□ -0.4
PKNOX2-202ENST00000526955 REC8O95072 547 aa12.55□□□□□ -0.4
PKNOX2-202ENST00000526955 CAVIN1Q6NZI2 390 aaKnown RBP12.55□□□□□ -0.4
PKNOX2-202ENST00000526955 STRN4Q9NRL3 753 aa12.55□□□□□ -0.4
PKNOX2-202ENST00000526955 CHAF1AQ13111 956 aaPredicted RBP12.55□□□□□ -0.4
PKNOX2-202ENST00000526955 MADDQ8WXG6 1647 aa12.55□□□□□ -0.4
PKNOX2-202ENST00000526955 DIAPH1O60610 1272 aaKnown RBP12.54□□□□□ -0.4
PKNOX2-202ENST00000526955 TMPOP42166 694 aaKnown RBP12.54□□□□□ -0.4
PKNOX2-202ENST00000526955 VPS37DQ86XT2 251 aa12.54□□□□□ -0.4
PKNOX2-202ENST00000526955 TNNQ9UQP3 1299 aa12.54□□□□□ -0.4
PKNOX2-202ENST00000526955 SBNO2Q9Y2G9 1366 aa12.54□□□□□ -0.4
PKNOX2-202ENST00000526955 TRPM2O94759 1503 aa12.54□□□□□ -0.4
PKNOX2-202ENST00000526955 NLRP1Q9C000 1473 aa12.54□□□□□ -0.4
PKNOX2-202ENST00000526955 DDX58O95786 925 aaKnown RBP12.54□□□□□ -0.4
PKNOX2-202ENST00000526955 BAG4O95429 457 aaKnown RBP12.53□□□□□ -0.4
PKNOX2-202ENST00000526955 HSP90B1P14625 803 aaKnown RBP12.53□□□□□ -0.4
PKNOX2-202ENST00000526955 PPP1R9BQ96SB3 815 aa12.53□□□□□ -0.4
PKNOX2-202ENST00000526955 IQGAP1P46940 1657 aa12.53□□□□□ -0.4
PKNOX2-202ENST00000526955 TPRNQ4KMQ1 711 aa12.53□□□□□ -0.4
PKNOX2-202ENST00000526955 SSFA2P28290 1259 aa12.53□□□□□ -0.4
PKNOX2-202ENST00000526955 FBXW7Q969H0 707 aa12.53□□□□□ -0.4
PKNOX2-202ENST00000526955 NRDCO43847 1150 aa12.52□□□□□ -0.4
PKNOX2-202ENST00000526955 PRDM11Q9NQV5 511 aa12.52□□□□□ -0.4
PKNOX2-202ENST00000526955 PUS7Q96PZ0 661 aaKnown RBP12.52□□□□□ -0.4
PKNOX2-202ENST00000526955 IBTKQ9P2D0 1353 aaPredicted RBP12.52□□□□□ -0.41
PKNOX2-202ENST00000526955 RBM10P98175 930 aaKnown RBP12.52□□□□□ -0.41
PKNOX2-202ENST00000526955 SLC52A1Q9NWF4 448 aa12.52□□□□□ -0.41
PKNOX2-202ENST00000526955 RAPGEF3O95398 923 aa12.52□□□□□ -0.41
PKNOX2-202ENST00000526955 GNAI1P63096 354 aa12.52□□□□□ -0.41
PKNOX2-202ENST00000526955 LRRFIP1Q32MZ4 808 aaKnown RBP12.52□□□□□ -0.41
PKNOX2-202ENST00000526955 PLCH2O75038 1416 aa12.51□□□□□ -0.41
PKNOX2-202ENST00000526955 ERVK-7P63135 1459 aa12.51□□□□□ -0.41
PKNOX2-202ENST00000526955 UQCRHLA0A096LP55 91 aa12.51□□□□□ -0.41
PKNOX2-202ENST00000526955 UQCRHP07919 91 aa12.51□□□□□ -0.41
PKNOX2-202ENST00000526955 HOMEZQ8IX15 550 aa12.51□□□□□ -0.41
PKNOX2-202ENST00000526955 ABTB2Q8N961 1025 aa12.51□□□□□ -0.41
PKNOX2-202ENST00000526955 CCDC34Q96HJ3 373 aa12.51□□□□□ -0.41
PKNOX2-202ENST00000526955 ZBTB40Q9NUA8 1239 aa12.51□□□□□ -0.41
PKNOX2-202ENST00000526955 RPGRIP1LQ68CZ1 1315 aa12.51□□□□□ -0.41
PKNOX2-202ENST00000526955 RTEL1-TNFRSF6BF6WH68 1400 aa12.51□□□□□ -0.41
PKNOX2-202ENST00000526955 MARCH6O60337 910 aa12.5□□□□□ -0.41
PKNOX2-202ENST00000526955 ADGRF5Q8IZF2 1346 aa12.5□□□□□ -0.41
PKNOX2-202ENST00000526955 ADGRL1O94910 1474 aa12.5□□□□□ -0.41
PKNOX2-202ENST00000526955 MCM2P49736 904 aa12.5□□□□□ -0.41
PKNOX2-202ENST00000526955 VPS53Q5VIR6 699 aa12.5□□□□□ -0.41
PKNOX2-202ENST00000526955 DYNC1I1O14576 645 aa12.5□□□□□ -0.41
PKNOX2-202ENST00000526955 TBC1D9Q6ZT07 1266 aa12.5□□□□□ -0.41
PKNOX2-202ENST00000526955 HMGN5P82970 282 aaKnown RBP12.5□□□□□ -0.41
PKNOX2-202ENST00000526955 PRPF40AO75400 957 aaKnown RBP12.49□□□□□ -0.41
PKNOX2-202ENST00000526955 ZNF445P59923 1031 aa12.49□□□□□ -0.41
PKNOX2-202ENST00000526955 SASS6Q6UVJ0 657 aa12.49□□□□□ -0.41
PKNOX2-202ENST00000526955 MYOM2P54296 1465 aa12.49□□□□□ -0.41
PKNOX2-202ENST00000526955 NUTM2GQ5VZR2 741 aa12.48□□□□□ -0.41
PKNOX2-202ENST00000526955 TOM1L2Q6ZVM7 507 aa12.48□□□□□ -0.41
PKNOX2-202ENST00000526955 ARHGAP45Q92619 1136 aa12.48□□□□□ -0.41
PKNOX2-202ENST00000526955 PTPRTO14522 1441 aa12.48□□□□□ -0.41
PKNOX2-202ENST00000526955 GOLGA6L6A8MZA4 724 aa12.48□□□□□ -0.41
PKNOX2-202ENST00000526955 EIF2S2P20042 333 aaKnown RBP12.48□□□□□ -0.41
PKNOX2-202ENST00000526955 CDC42BPBQ9Y5S2 1711 aa12.48□□□□□ -0.41
PKNOX2-202ENST00000526955 ZSCAN23Q3MJ62 389 aa12.47□□□□□ -0.41
PKNOX2-202ENST00000526955 KRI1Q8N9T8 703 aaKnown RBP12.47□□□□□ -0.41
PKNOX2-202ENST00000526955 ANKRD36BQ8N2N9 1353 aa12.47□□□□□ -0.41
PKNOX2-202ENST00000526955 TSPY26PQ9H489 355 aa12.47□□□□□ -0.41
PKNOX2-202ENST00000526955 C9orf78Q9NZ63 289 aaPredicted RBP12.47□□□□□ -0.41
PKNOX2-202ENST00000526955 TCEAL9Q9UHQ7 104 aa12.47□□□□□ -0.41
PKNOX2-202ENST00000526955 SPHKAPQ2M3C7 1700 aa12.47□□□□□ -0.41
PKNOX2-202ENST00000526955 ZNF518AQ6AHZ1 1483 aa12.47□□□□□ -0.41
PKNOX2-202ENST00000526955 SHROOM2Q13796 1616 aa12.47□□□□□ -0.41
PKNOX2-202ENST00000526955 NOL7Q9UMY1 257 aaKnown RBP12.47□□□□□ -0.41
PKNOX2-202ENST00000526955 SLC26A8Q96RN1 970 aa12.47□□□□□ -0.41
PKNOX2-202ENST00000526955 FCHSD2O94868 740 aa12.46□□□□□ -0.41
PKNOX2-202ENST00000526955 GAS2L3Q86XJ1 694 aa12.46□□□□□ -0.41
PKNOX2-202ENST00000526955 KIAA1210Q9ULL0 1709 aa12.46□□□□□ -0.41
PKNOX2-202ENST00000526955 TOM1O60784 492 aa12.46□□□□□ -0.41
PKNOX2-202ENST00000526955 ZKSCAN5Q9Y2L8 839 aa12.46□□□□□ -0.41
PKNOX2-202ENST00000526955 NCOA3Q9Y6Q9 1424 aa12.46□□□□□ -0.41
PKNOX2-202ENST00000526955 RAD21O60216 631 aa12.46□□□□□ -0.42
PKNOX2-202ENST00000526955 CCAR1Q8IX12 1150 aaKnown RBP12.46□□□□□ -0.42
PKNOX2-202ENST00000526955 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.45□□□□□ -0.42
PKNOX2-202ENST00000526955 RASSF8Q8NHQ8 419 aa12.45□□□□□ -0.42
PKNOX2-202ENST00000526955 ZNF692Q9BU19 519 aaPredicted RBP12.45□□□□□ -0.42
PKNOX2-202ENST00000526955 TATP17735 454 aaPredicted RBP12.45□□□□□ -0.42
PKNOX2-202ENST00000526955 GAS2L2Q8NHY3 880 aa12.45□□□□□ -0.42
PKNOX2-202ENST00000526955 GGNBP2Q9H3C7 697 aa12.45□□□□□ -0.42
PKNOX2-202ENST00000526955 FAM184AQ8NB25 1140 aa12.45□□□□□ -0.42
PKNOX2-202ENST00000526955 C14orf93Q9H972 538 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms