RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 FBXO31Q5XUX0 539 aaPredicted RBP8.41□□□□□ -1.06
TGFBR3-207ENST00000525962 CCAR2Q8N163 923 aaKnown RBP8.41□□□□□ -1.06
TGFBR3-207ENST00000525962 SIL1Q9H173 461 aa8.41□□□□□ -1.06
TGFBR3-207ENST00000525962 KDM5BQ9UGL1 1544 aa8.41□□□□□ -1.06
TGFBR3-207ENST00000525962 ERBB4Q15303 1308 aa8.41□□□□□ -1.06
TGFBR3-207ENST00000525962 TCOF1Q13428 1488 aaKnown RBP8.4□□□□□ -1.06
TGFBR3-207ENST00000525962 AEBP1Q8IUX7 1158 aa8.4□□□□□ -1.06
TGFBR3-207ENST00000525962 IFT140Q96RY7 1462 aa8.4□□□□□ -1.06
TGFBR3-207ENST00000525962 ANTXR1Q9H6X2 564 aa8.4□□□□□ -1.06
TGFBR3-207ENST00000525962 ZBTB40Q9NUA8 1239 aa8.4□□□□□ -1.06
TGFBR3-207ENST00000525962 CCDC39Q9UFE4 941 aa8.4□□□□□ -1.06
TGFBR3-207ENST00000525962 SPG7Q9UQ90 795 aa8.4□□□□□ -1.06
TGFBR3-207ENST00000525962 SYNJ2O15056 1496 aa8.4□□□□□ -1.06
TGFBR3-207ENST00000525962 MAGI2Q86UL8 1455 aa8.4□□□□□ -1.06
TGFBR3-207ENST00000525962 GOLGA6L6A8MZA4 724 aa8.4□□□□□ -1.07
TGFBR3-207ENST00000525962 FYB1O15117 783 aa8.4□□□□□ -1.07
TGFBR3-207ENST00000525962 HCLS1P14317 486 aaPredicted RBP8.4□□□□□ -1.07
TGFBR3-207ENST00000525962 CPA1P15085 419 aa8.4□□□□□ -1.07
TGFBR3-207ENST00000525962 NRDCO43847 1150 aa8.39□□□□□ -1.07
TGFBR3-207ENST00000525962 C9orf78Q9NZ63 289 aaPredicted RBP8.39□□□□□ -1.07
TGFBR3-207ENST00000525962 CCDC141Q6ZP82 1450 aa8.39□□□□□ -1.07
TGFBR3-207ENST00000525962 BCORL1Q5H9F3 1711 aa8.39□□□□□ -1.07
TGFBR3-207ENST00000525962 BECN2A8MW95 431 aa8.39□□□□□ -1.07
TGFBR3-207ENST00000525962 H3BQV1 296 aa8.39□□□□□ -1.07
TGFBR3-207ENST00000525962 NFE2L2Q16236 605 aa8.39□□□□□ -1.07
TGFBR3-207ENST00000525962 BMP2KLQ5H9B9 411 aa8.39□□□□□ -1.07
TGFBR3-207ENST00000525962 IFFO2Q5TF58 517 aa8.39□□□□□ -1.07
TGFBR3-207ENST00000525962 CKAP2LQ8IYA6 745 aa8.39□□□□□ -1.07
TGFBR3-207ENST00000525962 JARID2Q92833 1246 aaPredicted RBP8.39□□□□□ -1.07
TGFBR3-207ENST00000525962 GNL2Q13823 731 aaKnown RBP8.39□□□□□ -1.07
TGFBR3-207ENST00000525962 GORABQ5T7V8 394 aa8.39□□□□□ -1.07
TGFBR3-207ENST00000525962 TRERF1Q96PN7 1200 aa8.39□□□□□ -1.07
TGFBR3-207ENST00000525962 TRIM5Q9C035 493 aa8.39□□□□□ -1.07
TGFBR3-207ENST00000525962 A2MP01023 1474 aa8.39□□□□□ -1.07
TGFBR3-207ENST00000525962 NOS1P29475 1434 aa8.39□□□□□ -1.07
TGFBR3-207ENST00000525962 UBTFL1P0CB47 393 aaPredicted RBP8.38□□□□□ -1.07
TGFBR3-207ENST00000525962 IDI1Q13907 227 aa8.38□□□□□ -1.07
TGFBR3-207ENST00000525962 GIMAP6Q6P9H5 292 aa8.38□□□□□ -1.07
TGFBR3-207ENST00000525962 CCDC83Q8IWF9 413 aa8.38□□□□□ -1.07
TGFBR3-207ENST00000525962 TFIP11Q9UBB9 837 aaKnown RBP8.38□□□□□ -1.07
TGFBR3-207ENST00000525962 CIZ1Q9ULV3 898 aaPredicted RBP8.38□□□□□ -1.07
TGFBR3-207ENST00000525962 AAMPQ13685 434 aa8.38□□□□□ -1.07
TGFBR3-207ENST00000525962 RAB3GAP1Q15042 981 aa8.38□□□□□ -1.07
TGFBR3-207ENST00000525962 USHBP1Q8N6Y0 703 aa8.38□□□□□ -1.07
TGFBR3-207ENST00000525962 GOLGA6L19H0YKK7 550 aa8.38□□□□□ -1.07
TGFBR3-207ENST00000525962 PDE4CQ08493 712 aa8.38□□□□□ -1.07
TGFBR3-207ENST00000525962 SF3A1Q15459 793 aaKnown RBP8.38□□□□□ -1.07
TGFBR3-207ENST00000525962 CSPP1Q1MSJ5 1256 aa8.38□□□□□ -1.07
TGFBR3-207ENST00000525962 CYB5RLQ6IPT4 315 aa8.38□□□□□ -1.07
TGFBR3-207ENST00000525962 ATP10BO94823 1461 aa8.38□□□□□ -1.07
TGFBR3-207ENST00000525962 CEP170Q5SW79 1584 aa8.38□□□□□ -1.07
TGFBR3-207ENST00000525962 TNNT3P45378 269 aaPredicted RBP8.37□□□□□ -1.07
TGFBR3-207ENST00000525962 HDAC1Q13547 482 aaPredicted RBP8.37□□□□□ -1.07
TGFBR3-207ENST00000525962 SMC5Q8IY18 1101 aa8.37□□□□□ -1.07
TGFBR3-207ENST00000525962 TRIM35Q9UPQ4 493 aa8.37□□□□□ -1.07
TGFBR3-207ENST00000525962 SAMD9Q5K651 1589 aa8.37□□□□□ -1.07
TGFBR3-207ENST00000525962 IFIT2P09913 472 aaKnown RBP8.37□□□□□ -1.07
TGFBR3-207ENST00000525962 KLHL40Q2TBA0 621 aa8.37□□□□□ -1.07
TGFBR3-207ENST00000525962 DDX11Q96FC9 970 aa8.37□□□□□ -1.07
TGFBR3-207ENST00000525962 ZNF521Q96K83 1311 aa8.37□□□□□ -1.07
TGFBR3-207ENST00000525962 FOXO3O43524 673 aa8.37□□□□□ -1.07
TGFBR3-207ENST00000525962 FCHSD2O94868 740 aa8.37□□□□□ -1.07
TGFBR3-207ENST00000525962 FAM184AQ8NB25 1140 aa8.37□□□□□ -1.07
TGFBR3-207ENST00000525962 TMX3Q96JJ7 454 aa8.37□□□□□ -1.07
TGFBR3-207ENST00000525962 SLC26A8Q96RN1 970 aa8.37□□□□□ -1.07
TGFBR3-207ENST00000525962 SCAF11Q99590 1463 aaKnown RBP8.37□□□□□ -1.07
TGFBR3-207ENST00000525962 GNAI2P04899 355 aa8.36□□□□□ -1.07
TGFBR3-207ENST00000525962 FILIP1Q7Z7B0 1213 aa8.36□□□□□ -1.07
TGFBR3-207ENST00000525962 LRRCC1Q9C099 1032 aa8.36□□□□□ -1.07
TGFBR3-207ENST00000525962 SRGAP3O43295 1099 aa8.36□□□□□ -1.07
TGFBR3-207ENST00000525962 NECAB1Q8N987 351 aa8.36□□□□□ -1.07
TGFBR3-207ENST00000525962 FAM135AQ9P2D6 1515 aa8.36□□□□□ -1.07
TGFBR3-207ENST00000525962 COL17A1Q9UMD9 1497 aaPredicted RBP8.36□□□□□ -1.07
TGFBR3-207ENST00000525962 VAMP4O75379 141 aa8.36□□□□□ -1.07
TGFBR3-207ENST00000525962 MBD3O95983 291 aa8.36□□□□□ -1.07
TGFBR3-207ENST00000525962 NLRP6P59044 892 aa8.36□□□□□ -1.07
TGFBR3-207ENST00000525962 SKIDA1Q1XH10 827 aa8.36□□□□□ -1.07
TGFBR3-207ENST00000525962 FAM173BQ6P4H8 233 aa8.36□□□□□ -1.07
TGFBR3-207ENST00000525962 JAKMIP1Q96N16 626 aaKnown RBP8.36□□□□□ -1.07
TGFBR3-207ENST00000525962 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.36□□□□□ -1.07
TGFBR3-207ENST00000525962 CNPY2Q9Y2B0 182 aa8.36□□□□□ -1.07
TGFBR3-207ENST00000525962 V9GYY5 206 aaPredicted RBP8.36□□□□□ -1.07
TGFBR3-207ENST00000525962 BLMP54132 1417 aaPredicted RBP8.36□□□□□ -1.07
TGFBR3-207ENST00000525962 CASTP20810 708 aaKnown RBP8.35□□□□□ -1.07
TGFBR3-207ENST00000525962 TTC22Q5TAA0 569 aa8.35□□□□□ -1.07
TGFBR3-207ENST00000525962 PLEKHM2Q8IWE5 1019 aa8.35□□□□□ -1.07
TGFBR3-207ENST00000525962 FAM177A1Q8N128 213 aaPredicted RBP8.35□□□□□ -1.07
TGFBR3-207ENST00000525962 PDCL3Q9H2J4 239 aa8.35□□□□□ -1.07
TGFBR3-207ENST00000525962 ZMYM4Q5VZL5 1548 aa8.35□□□□□ -1.07
TGFBR3-207ENST00000525962 ASXL1Q8IXJ9 1541 aa8.35□□□□□ -1.07
TGFBR3-207ENST00000525962 ADCY5O95622 1261 aa8.35□□□□□ -1.07
TGFBR3-207ENST00000525962 ZKSCAN1P17029 563 aaPredicted RBP8.35□□□□□ -1.07
TGFBR3-207ENST00000525962 TEFQ10587 303 aa8.35□□□□□ -1.07
TGFBR3-207ENST00000525962 TPD52L1Q16890 204 aaPredicted RBP8.35□□□□□ -1.07
TGFBR3-207ENST00000525962 C16orf45Q96MC5 204 aaPredicted RBP8.35□□□□□ -1.07
TGFBR3-207ENST00000525962 LRRFIP2Q9Y608 721 aaKnown RBP8.35□□□□□ -1.07
TGFBR3-207ENST00000525962 NINLQ9Y2I6 1382 aa8.35□□□□□ -1.07
TGFBR3-207ENST00000525962 ERICH4A6NGS2 130 aa8.35□□□□□ -1.07
TGFBR3-207ENST00000525962 ZBTB7BO15156 539 aaPredicted RBP8.35□□□□□ -1.07
TGFBR3-207ENST00000525962 GRIN2AQ12879 1464 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms