RNA–Protein interactions for RNA: ENST00000525528.1

BDNF-212, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 BASIC

Gene BDNF, Length 4,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-212ENST00000525528 C6orf229H3BNL8 230 aa8.39□□□□□ -1.07
BDNF-212ENST00000525528 FOXO3O43524 673 aa8.39□□□□□ -1.07
BDNF-212ENST00000525528 AAMPQ13685 434 aa8.39□□□□□ -1.07
BDNF-212ENST00000525528 CABP1Q9NZU7 370 aa8.39□□□□□ -1.07
BDNF-212ENST00000525528 MYL6BP14649 208 aa8.39□□□□□ -1.07
BDNF-212ENST00000525528 MAP7D2Q96T17 732 aa8.39□□□□□ -1.07
BDNF-212ENST00000525528 MSH6P52701 1360 aa8.39□□□□□ -1.07
BDNF-212ENST00000525528 TEX13AQ9BXU3 409 aaPredicted RBP8.38□□□□□ -1.07
BDNF-212ENST00000525528 RAD54L2Q9Y4B4 1467 aa8.38□□□□□ -1.07
BDNF-212ENST00000525528 CHMP5Q9NZZ3 219 aa8.38□□□□□ -1.07
BDNF-212ENST00000525528 RFC4P35249 363 aa8.38□□□□□ -1.07
BDNF-212ENST00000525528 OLFM4Q6UX06 510 aa8.38□□□□□ -1.07
BDNF-212ENST00000525528 ZNF622Q969S3 477 aaKnown RBP eCLIP8.38□□□□□ -1.07
BDNF-212ENST00000525528 FEZ1Q99689 392 aa8.38□□□□□ -1.07
BDNF-212ENST00000525528 ZNF219Q9P2Y4 722 aaPredicted RBP8.38□□□□□ -1.07
BDNF-212ENST00000525528 ABCF2Q9UG63 623 aa8.38□□□□□ -1.07
BDNF-212ENST00000525528 TDO2P48775 406 aa8.38□□□□□ -1.07
BDNF-212ENST00000525528 UBAC1Q9BSL1 405 aa8.38□□□□□ -1.07
BDNF-212ENST00000525528 ATAD2Q6PL18 1390 aa8.38□□□□□ -1.07
BDNF-212ENST00000525528 AMOTQ4VCS5 1084 aa8.37□□□□□ -1.07
BDNF-212ENST00000525528 JMYQ8N9B5 988 aa8.37□□□□□ -1.07
BDNF-212ENST00000525528 MYO6Q9UM54 1294 aa8.37□□□□□ -1.07
BDNF-212ENST00000525528 ZNF644Q9H582 1327 aaPredicted RBP8.37□□□□□ -1.07
BDNF-212ENST00000525528 A0A087WZG4 1122 aa8.37□□□□□ -1.07
BDNF-212ENST00000525528 BTBD11A6QL63 1104 aa8.37□□□□□ -1.07
BDNF-212ENST00000525528 FOXD4L6Q3SYB3 417 aaPredicted RBP8.37□□□□□ -1.07
BDNF-212ENST00000525528 FOXD4L3Q6VB84 417 aaPredicted RBP8.37□□□□□ -1.07
BDNF-212ENST00000525528 MPRIPQ6WCQ1 1025 aa8.37□□□□□ -1.07
BDNF-212ENST00000525528 SDF4Q9BRK5 362 aa8.37□□□□□ -1.07
BDNF-212ENST00000525528 ZHX3Q9H4I2 956 aa8.37□□□□□ -1.07
BDNF-212ENST00000525528 DDX49Q9Y6V7 483 aaKnown RBP8.37□□□□□ -1.07
BDNF-212ENST00000525528 DDX11L8A8MPP1 907 aa8.37□□□□□ -1.07
BDNF-212ENST00000525528 PDCP20941 246 aa8.37□□□□□ -1.07
BDNF-212ENST00000525528 CCDC97Q96F63 343 aaPredicted RBP8.37□□□□□ -1.07
BDNF-212ENST00000525528 NCAPD3P42695 1498 aa8.37□□□□□ -1.07
BDNF-212ENST00000525528 GNAI2P04899 355 aa8.37□□□□□ -1.07
BDNF-212ENST00000525528 POLR3DP05423 398 aaPredicted RBP8.37□□□□□ -1.07
BDNF-212ENST00000525528 LDHCP07864 332 aa8.37□□□□□ -1.07
BDNF-212ENST00000525528 MATR3P43243 847 aaKnown RBP eCLIP8.37□□□□□ -1.07
BDNF-212ENST00000525528 RBM10P98175 930 aaKnown RBP8.37□□□□□ -1.07
BDNF-212ENST00000525528 CTNNA3Q9UI47 895 aa8.37□□□□□ -1.07
BDNF-212ENST00000525528 CD109Q6YHK3 1445 aa8.36□□□□□ -1.07
BDNF-212ENST00000525528 TOP2BQ02880 1626 aa8.36□□□□□ -1.07
BDNF-212ENST00000525528 USP5P45974 858 aa8.36□□□□□ -1.07
BDNF-212ENST00000525528 FAM161AQ3B820 660 aa8.36□□□□□ -1.07
BDNF-212ENST00000525528 HFM1A2PYH4 1435 aa8.36□□□□□ -1.07
BDNF-212ENST00000525528 ANKRD30BQ9BXX2 1392 aa8.36□□□□□ -1.07
BDNF-212ENST00000525528 SASS6Q6UVJ0 657 aa8.36□□□□□ -1.07
BDNF-212ENST00000525528 DZIP1Q86YF9 867 aaKnown RBP8.36□□□□□ -1.07
BDNF-212ENST00000525528 OGFOD1Q8N543 542 aa8.36□□□□□ -1.07
BDNF-212ENST00000525528 DRC1Q96MC2 740 aa8.36□□□□□ -1.07
BDNF-212ENST00000525528 MAGEC2Q9UBF1 373 aaPredicted RBP8.36□□□□□ -1.07
BDNF-212ENST00000525528 HDAC9Q9UKV0 1011 aa8.36□□□□□ -1.07
BDNF-212ENST00000525528 NOL7Q9UMY1 257 aaKnown RBP8.36□□□□□ -1.07
BDNF-212ENST00000525528 CCDC69A6NI79 296 aa8.36□□□□□ -1.07
BDNF-212ENST00000525528 CCT4P50991 539 aaKnown RBP8.36□□□□□ -1.07
BDNF-212ENST00000525528 TWISTNBQ3B726 338 aaPredicted RBP8.36□□□□□ -1.07
BDNF-212ENST00000525528 WDR97A6NE52 1622 aa8.36□□□□□ -1.07
BDNF-212ENST00000525528 ST5P78524 1137 aa8.35□□□□□ -1.07
BDNF-212ENST00000525528 STIM1Q13586 685 aa8.35□□□□□ -1.07
BDNF-212ENST00000525528 JDP2Q8WYK2 163 aa8.35□□□□□ -1.07
BDNF-212ENST00000525528 CABP5Q9NP86 173 aa8.35□□□□□ -1.07
BDNF-212ENST00000525528 LUC7LQ9NQ29 371 aaKnown RBP8.35□□□□□ -1.07
BDNF-212ENST00000525528 SKOR2Q2VWA4 1001 aaPredicted RBP8.35□□□□□ -1.07
BDNF-212ENST00000525528 DDX46Q7L014 1031 aaKnown RBP8.35□□□□□ -1.07
BDNF-212ENST00000525528 SMARCC1Q92922 1105 aaPredicted RBP8.35□□□□□ -1.07
BDNF-212ENST00000525528 AKAP2Q9Y2D5 859 aa8.35□□□□□ -1.07
BDNF-212ENST00000525528 METTL24Q5JXM2 366 aa8.35□□□□□ -1.07
BDNF-212ENST00000525528 NUDT16Q96DE0 195 aaKnown RBP8.35□□□□□ -1.07
BDNF-212ENST00000525528 FGD6Q6ZV73 1430 aa8.35□□□□□ -1.07
BDNF-212ENST00000525528 FKBP4Q02790 459 aaKnown RBP eCLIP8.35□□□□□ -1.07
BDNF-212ENST00000525528 FILIP1LQ4L180 1135 aa8.35□□□□□ -1.07
BDNF-212ENST00000525528 C8orf37Q96NL8 207 aa8.35□□□□□ -1.07
BDNF-212ENST00000525528 NAT10Q9H0A0 1025 aaKnown RBP8.35□□□□□ -1.07
BDNF-212ENST00000525528 EHMT1Q9H9B1 1298 aa8.35□□□□□ -1.07
BDNF-212ENST00000525528 AMOTL2Q9Y2J4 779 aa8.35□□□□□ -1.07
BDNF-212ENST00000525528 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.35□□□□□ -1.07
BDNF-212ENST00000525528 SLC4A2P04920 1241 aa8.34□□□□□ -1.07
BDNF-212ENST00000525528 MKNK2Q9HBH9 465 aa8.34□□□□□ -1.07
BDNF-212ENST00000525528 LMOD1P29536 600 aaPredicted RBP8.34□□□□□ -1.07
BDNF-212ENST00000525528 KRT28Q7Z3Y7 464 aa8.34□□□□□ -1.07
BDNF-212ENST00000525528 VTI1AQ96AJ9 217 aa8.34□□□□□ -1.07
BDNF-212ENST00000525528 CRBNQ96SW2 442 aa8.34□□□□□ -1.07
BDNF-212ENST00000525528 CDC5LQ99459 802 aaKnown RBP8.34□□□□□ -1.07
BDNF-212ENST00000525528 FOSBP53539 338 aa8.34□□□□□ -1.07
BDNF-212ENST00000525528 FAM13BQ9NYF5 915 aa8.34□□□□□ -1.07
BDNF-212ENST00000525528 PRDM2Q13029 1718 aa8.34□□□□□ -1.07
BDNF-212ENST00000525528 AKNAQ7Z591 1439 aa8.34□□□□□ -1.07
BDNF-212ENST00000525528 IDH1O75874 414 aaKnown RBP8.34□□□□□ -1.07
BDNF-212ENST00000525528 MTERF4Q7Z6M4 381 aaKnown RBP8.34□□□□□ -1.07
BDNF-212ENST00000525528 HOMER1Q86YM7 354 aa8.34□□□□□ -1.07
BDNF-212ENST00000525528 NUP133Q8WUM0 1156 aa8.34□□□□□ -1.07
BDNF-212ENST00000525528 CUL5Q93034 780 aa8.34□□□□□ -1.07
BDNF-212ENST00000525528 NPHP3Q7Z494 1330 aa8.34□□□□□ -1.08
BDNF-212ENST00000525528 SSBP05455 408 aaKnown RBP eCLIP8.33□□□□□ -1.08
BDNF-212ENST00000525528 POTEJP0CG39 1038 aa8.33□□□□□ -1.08
BDNF-212ENST00000525528 TRMT112Q9UI30 125 aaKnown RBP8.33□□□□□ -1.08
BDNF-212ENST00000525528 CDKL5O76039 1030 aa8.33□□□□□ -1.08
BDNF-212ENST00000525528 LARP1Q6PKG0 1096 aaKnown RBP8.33□□□□□ -1.08
BDNF-212ENST00000525528 TCP11L2Q8N4U5 519 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms