RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 GBP3Q9H0R5 595 aa16.1■□□□□ 0.17
LRRK1-202ENST00000525284 CALCOCO1Q9P1Z2 691 aa16.1■□□□□ 0.17
LRRK1-202ENST00000525284 TMCO5BA8MYB1 307 aa16.1■□□□□ 0.17
LRRK1-202ENST00000525284 RAB3GAP2Q9H2M9 1393 aa16.09■□□□□ 0.17
LRRK1-202ENST00000525284 CCDC175P0C221 793 aa16.09■□□□□ 0.17
LRRK1-202ENST00000525284 SLC3A2P08195 630 aaKnown RBP16.09■□□□□ 0.17
LRRK1-202ENST00000525284 ZHX1Q9UKY1 873 aaPredicted RBP16.08■□□□□ 0.17
LRRK1-202ENST00000525284 CCDC178Q5BJE1 867 aa16.08■□□□□ 0.16
LRRK1-202ENST00000525284 DNA2P51530 1060 aa16.08■□□□□ 0.16
LRRK1-202ENST00000525284 CARMIL1Q5VZK9 1371 aa16.08■□□□□ 0.16
LRRK1-202ENST00000525284 UBTFL1P0CB47 393 aaPredicted RBP16.08■□□□□ 0.16
LRRK1-202ENST00000525284 DAAM2Q86T65 1068 aa16.08■□□□□ 0.16
LRRK1-202ENST00000525284 PANK1Q8TE04 598 aa16.08■□□□□ 0.16
LRRK1-202ENST00000525284 TSPYL4Q9UJ04 414 aa16.08■□□□□ 0.16
LRRK1-202ENST00000525284 CCDC160A6NGH7 325 aa16.07■□□□□ 0.16
LRRK1-202ENST00000525284 CTNNBL1Q8WYA6 563 aaPredicted RBP16.07■□□□□ 0.16
LRRK1-202ENST00000525284 GCOM1H8Y6P7 765 aaPredicted RBP16.07■□□□□ 0.16
LRRK1-202ENST00000525284 MYZAPP0CAP1 466 aa16.07■□□□□ 0.16
LRRK1-202ENST00000525284 UPF3BQ9BZI7 483 aaKnown RBP16.07■□□□□ 0.16
LRRK1-202ENST00000525284 TOP2AP11388 1531 aaKnown RBP16.07■□□□□ 0.16
LRRK1-202ENST00000525284 FAM177BA6PVY3 158 aa16.07■□□□□ 0.16
LRRK1-202ENST00000525284 LUZP1Q86V48 1076 aa16.07■□□□□ 0.16
LRRK1-202ENST00000525284 SRRTQ9BXP5 876 aaKnown RBP16.07■□□□□ 0.16
LRRK1-202ENST00000525284 COMMD10Q9Y6G5 202 aa16.07■□□□□ 0.16
LRRK1-202ENST00000525284 ANKRD18BA2A2Z9 1011 aa16.06■□□□□ 0.16
LRRK1-202ENST00000525284 MAP9Q49MG5 647 aa16.06■□□□□ 0.16
LRRK1-202ENST00000525284 CASQ1P31415 396 aa16.06■□□□□ 0.16
LRRK1-202ENST00000525284 CETN2P41208 172 aa16.06■□□□□ 0.16
LRRK1-202ENST00000525284 MNAT1P51948 309 aa16.06■□□□□ 0.16
LRRK1-202ENST00000525284 RAI14Q9P0K7 980 aa16.06■□□□□ 0.16
LRRK1-202ENST00000525284 ZBED9Q6R2W3 1325 aa16.06■□□□□ 0.16
LRRK1-202ENST00000525284 TMX1Q9H3N1 280 aa16.06■□□□□ 0.16
LRRK1-202ENST00000525284 ESPNB1AK53 854 aa16.05■□□□□ 0.16
LRRK1-202ENST00000525284 L3MBTL2Q969R5 705 aa16.05■□□□□ 0.16
LRRK1-202ENST00000525284 NUP133Q8WUM0 1156 aa16.05■□□□□ 0.16
LRRK1-202ENST00000525284 ATP2C2O75185 946 aa16.05■□□□□ 0.16
LRRK1-202ENST00000525284 SPECC1Q5M775 1068 aa16.05■□□□□ 0.16
LRRK1-202ENST00000525284 MCM2P49736 904 aa16.04■□□□□ 0.16
LRRK1-202ENST00000525284 CFAP100Q494V2 611 aa16.04■□□□□ 0.16
LRRK1-202ENST00000525284 CEP57L1Q8IYX8 460 aa16.04■□□□□ 0.16
LRRK1-202ENST00000525284 ZNF397Q8NF99 534 aaPredicted RBP16.04■□□□□ 0.16
LRRK1-202ENST00000525284 DIAPH1O60610 1272 aaKnown RBP16.04■□□□□ 0.16
LRRK1-202ENST00000525284 TRIM22Q8IYM9 498 aa16.04■□□□□ 0.16
LRRK1-202ENST00000525284 URI1O94763 535 aaPredicted RBP16.04■□□□□ 0.16
LRRK1-202ENST00000525284 KRT85P78386 507 aa16.04■□□□□ 0.16
LRRK1-202ENST00000525284 MACROD2A1Z1Q3 448 aa16.04■□□□□ 0.16
LRRK1-202ENST00000525284 GTF2A1P52655 376 aaPredicted RBP16.04■□□□□ 0.16
LRRK1-202ENST00000525284 SPA17Q15506 151 aa16.04■□□□□ 0.16
LRRK1-202ENST00000525284 FAM107BQ9H098 131 aa16.04■□□□□ 0.16
LRRK1-202ENST00000525284 BMP2KQ9NSY1 1161 aaPredicted RBP16.04■□□□□ 0.16
LRRK1-202ENST00000525284 ZWINTO95229 277 aa16.03■□□□□ 0.16
LRRK1-202ENST00000525284 POTEJP0CG39 1038 aa16.03■□□□□ 0.16
LRRK1-202ENST00000525284 HOOK3Q86VS8 718 aa16.03■□□□□ 0.16
LRRK1-202ENST00000525284 PTPN14Q15678 1187 aa16.03■□□□□ 0.16
LRRK1-202ENST00000525284 SOGA3Q5TF21 947 aa16.03■□□□□ 0.16
LRRK1-202ENST00000525284 CCDC69A6NI79 296 aa16.03■□□□□ 0.16
LRRK1-202ENST00000525284 C6orf163Q5TEZ5 329 aa16.03■□□□□ 0.16
LRRK1-202ENST00000525284 FHAD1B1AJZ9 1412 aa16.03■□□□□ 0.16
LRRK1-202ENST00000525284 RAPGEF2Q9Y4G8 1499 aa16.03■□□□□ 0.16
LRRK1-202ENST00000525284 SURF6O75683 361 aaKnown RBP16.03■□□□□ 0.16
LRRK1-202ENST00000525284 SPATA32Q96LK8 384 aa16.03■□□□□ 0.16
LRRK1-202ENST00000525284 FBF1Q8TES7 1133 aa16.02■□□□□ 0.16
LRRK1-202ENST00000525284 TTC16Q8NEE8 873 aa16.02■□□□□ 0.16
LRRK1-202ENST00000525284 ARHGAP35Q9NRY4 1499 aa16.02■□□□□ 0.16
LRRK1-202ENST00000525284 MPHOSPH10O00566 681 aaKnown RBP16.02■□□□□ 0.16
LRRK1-202ENST00000525284 TIGD1Q96MW7 591 aa16.02■□□□□ 0.16
LRRK1-202ENST00000525284 KIF4BQ2VIQ3 1234 aa16.02■□□□□ 0.15
LRRK1-202ENST00000525284 GIGYF2Q6Y7W6 1299 aaKnown RBP16.02■□□□□ 0.15
LRRK1-202ENST00000525284 DNAAF4Q8WXU2 420 aa16.02■□□□□ 0.15
LRRK1-202ENST00000525284 IMMTQ16891 758 aaKnown RBP16.02■□□□□ 0.15
LRRK1-202ENST00000525284 LARP1BQ659C4 914 aaKnown RBP16.02■□□□□ 0.15
LRRK1-202ENST00000525284 LARP1Q6PKG0 1096 aaKnown RBP16.02■□□□□ 0.15
LRRK1-202ENST00000525284 NUP62CLQ9H1M0 184 aa16.02■□□□□ 0.15
LRRK1-202ENST00000525284 HOMER2Q9NSB8 354 aa16.02■□□□□ 0.15
LRRK1-202ENST00000525284 SMARCC1Q92922 1105 aaPredicted RBP16.01■□□□□ 0.15
LRRK1-202ENST00000525284 NOL7Q9UMY1 257 aaKnown RBP16.01■□□□□ 0.15
LRRK1-202ENST00000525284 CYP46A1Q9Y6A2 500 aa16.01■□□□□ 0.15
LRRK1-202ENST00000525284 SMTNL1A8MU46 457 aa16.01■□□□□ 0.15
LRRK1-202ENST00000525284 FERP16591 822 aa16.01■□□□□ 0.15
LRRK1-202ENST00000525284 SEPT6Q14141 434 aa16.01■□□□□ 0.15
LRRK1-202ENST00000525284 WDR33Q9C0J8 1336 aaKnown RBP16.01■□□□□ 0.15
LRRK1-202ENST00000525284 ST20-MTHFSA0A0A6YYL1 179 aa16.01■□□□□ 0.15
LRRK1-202ENST00000525284 KIF5CO60282 957 aa16.01■□□□□ 0.15
LRRK1-202ENST00000525284 TTC39AQ5SRH9 613 aa16.01■□□□□ 0.15
LRRK1-202ENST00000525284 APBB1IPQ7Z5R6 666 aaPredicted RBP16■□□□□ 0.15
LRRK1-202ENST00000525284 ERC1Q8IUD2 1116 aa16■□□□□ 0.15
LRRK1-202ENST00000525284 FEZ1Q99689 392 aa16■□□□□ 0.15
LRRK1-202ENST00000525284 CCDC57Q2TAC2 916 aa16■□□□□ 0.15
LRRK1-202ENST00000525284 CHMP4BP1P59074 171 aa16■□□□□ 0.15
LRRK1-202ENST00000525284 NAP1L3Q99457 506 aaPredicted RBP16■□□□□ 0.15
LRRK1-202ENST00000525284 PLCD3Q8N3E9 789 aa16■□□□□ 0.15
LRRK1-202ENST00000525284 CAMK4Q16566 473 aa16■□□□□ 0.15
LRRK1-202ENST00000525284 SPECC1LQ69YQ0 1117 aa16■□□□□ 0.15
LRRK1-202ENST00000525284 LMAN1P49257 510 aa16■□□□□ 0.15
LRRK1-202ENST00000525284 MCM3P25205 808 aa15.99■□□□□ 0.15
LRRK1-202ENST00000525284 PIBF1Q8WXW3 757 aa15.99■□□□□ 0.15
LRRK1-202ENST00000525284 HIP1O00291 1037 aa15.99■□□□□ 0.15
LRRK1-202ENST00000525284 CTR9Q6PD62 1173 aa15.99■□□□□ 0.15
LRRK1-202ENST00000525284 HLTFQ14527 1009 aaKnown RBP eCLIP15.99■□□□□ 0.15
LRRK1-202ENST00000525284 MAP4K4O95819 1239 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 236.3 ms