RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.27□□□□□ -0.61
PKP3-202ENST00000524646 IL27Q8NEV9 243 aa11.27□□□□□ -0.61
PKP3-202ENST00000524646 TBC1D2Q9BYX2 928 aa11.27□□□□□ -0.61
PKP3-202ENST00000524646 IFT57Q9NWB7 429 aa11.27□□□□□ -0.61
PKP3-202ENST00000524646 ABCC4O15439 1325 aa11.27□□□□□ -0.61
PKP3-202ENST00000524646 METP08581 1390 aa11.27□□□□□ -0.61
PKP3-202ENST00000524646 OVOS2A0A0J9YW53 1432 aa11.26□□□□□ -0.61
PKP3-202ENST00000524646 OVOS2Q6IE36 1432 aa11.26□□□□□ -0.61
PKP3-202ENST00000524646 TUBGCP6Q96RT7 1819 aa11.26□□□□□ -0.61
PKP3-202ENST00000524646 WASLO00401 505 aaPredicted RBP11.26□□□□□ -0.61
PKP3-202ENST00000524646 GNAI1P63096 354 aa11.26□□□□□ -0.61
PKP3-202ENST00000524646 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.26□□□□□ -0.61
PKP3-202ENST00000524646 CHMP4BQ9H444 224 aaKnown RBP11.26□□□□□ -0.61
PKP3-202ENST00000524646 TNRQ92752 1358 aa11.26□□□□□ -0.61
PKP3-202ENST00000524646 IL13P35225 146 aa11.25□□□□□ -0.61
PKP3-202ENST00000524646 NUCB1Q02818 461 aa11.25□□□□□ -0.61
PKP3-202ENST00000524646 FAM69CQ0P6D2 419 aa11.25□□□□□ -0.61
PKP3-202ENST00000524646 WAPLQ7Z5K2 1190 aa11.25□□□□□ -0.61
PKP3-202ENST00000524646 ARHGAP45Q92619 1136 aa11.25□□□□□ -0.61
PKP3-202ENST00000524646 SIRT1Q96EB6 747 aa11.25□□□□□ -0.61
PKP3-202ENST00000524646 C22orf23Q9BZE7 217 aa11.25□□□□□ -0.61
PKP3-202ENST00000524646 SLKQ9H2G2 1235 aaPredicted RBP11.25□□□□□ -0.61
PKP3-202ENST00000524646 MARF1Q9Y4F3 1742 aaKnown RBP11.25□□□□□ -0.61
PKP3-202ENST00000524646 KIF24Q5T7B8 1368 aa11.25□□□□□ -0.61
PKP3-202ENST00000524646 CACNA1FO60840 1977 aa11.25□□□□□ -0.61
PKP3-202ENST00000524646 DIP2AQ14689 1571 aa11.24□□□□□ -0.61
PKP3-202ENST00000524646 MFAP1P55081 439 aaKnown RBP11.24□□□□□ -0.61
PKP3-202ENST00000524646 NME9Q86XW9 330 aa11.24□□□□□ -0.61
PKP3-202ENST00000524646 MRPL50Q8N5N7 158 aaKnown RBP11.24□□□□□ -0.61
PKP3-202ENST00000524646 EMILIN1Q9Y6C2 1016 aa11.24□□□□□ -0.61
PKP3-202ENST00000524646 XRN1Q8IZH2 1706 aaKnown RBP11.23□□□□□ -0.61
PKP3-202ENST00000524646 RGPD8O14715 1765 aaPredicted RBP11.23□□□□□ -0.61
PKP3-202ENST00000524646 ZNF853P0CG23 659 aa11.23□□□□□ -0.61
PKP3-202ENST00000524646 ADAMTS13Q76LX8 1427 aa11.23□□□□□ -0.61
PKP3-202ENST00000524646 PIK3C2AO00443 1686 aa11.23□□□□□ -0.61
PKP3-202ENST00000524646 FER1L4A9Z1Z3 1794 aa11.23□□□□□ -0.61
PKP3-202ENST00000524646 HMOX1P09601 288 aa11.22□□□□□ -0.61
PKP3-202ENST00000524646 COG3Q96JB2 828 aa11.22□□□□□ -0.61
PKP3-202ENST00000524646 BRPF3Q9ULD4 1205 aa11.22□□□□□ -0.61
PKP3-202ENST00000524646 RGS12O14924 1447 aa11.21□□□□□ -0.61
PKP3-202ENST00000524646 USP6P35125 1406 aa11.21□□□□□ -0.61
PKP3-202ENST00000524646 TMEM2Q9UHN6 1383 aa11.21□□□□□ -0.61
PKP3-202ENST00000524646 VAMP4O75379 141 aa11.21□□□□□ -0.61
PKP3-202ENST00000524646 BMP2KLQ5H9B9 411 aa11.21□□□□□ -0.61
PKP3-202ENST00000524646 CHD1LQ86WJ1 897 aa11.21□□□□□ -0.61
PKP3-202ENST00000524646 HSCBQ8IWL3 235 aa11.21□□□□□ -0.61
PKP3-202ENST00000524646 GCC1Q96CN9 775 aa11.21□□□□□ -0.61
PKP3-202ENST00000524646 NUDT16Q96DE0 195 aaKnown RBP11.21□□□□□ -0.61
PKP3-202ENST00000524646 PHACTR3Q96KR7 559 aa11.21□□□□□ -0.61
PKP3-202ENST00000524646 API5Q9BZZ5 524 aaKnown RBP11.21□□□□□ -0.61
PKP3-202ENST00000524646 MBIPQ9NS73 344 aa11.21□□□□□ -0.61
PKP3-202ENST00000524646 ATP10DQ9P241 1426 aa11.2□□□□□ -0.62
PKP3-202ENST00000524646 PLEKHG1Q9ULL1 1385 aa11.2□□□□□ -0.62
PKP3-202ENST00000524646 PRR36Q9H6K5 1346 aa11.2□□□□□ -0.62
PKP3-202ENST00000524646 RBM25P49756 843 aaKnown RBP11.2□□□□□ -0.62
PKP3-202ENST00000524646 CYB5RLQ6IPT4 315 aa11.2□□□□□ -0.62
PKP3-202ENST00000524646 THUMPD2Q9BTF0 503 aaKnown RBP11.2□□□□□ -0.62
PKP3-202ENST00000524646 LNPKQ9C0E8 428 aa11.2□□□□□ -0.62
PKP3-202ENST00000524646 CHMP5Q9NZZ3 219 aa11.2□□□□□ -0.62
PKP3-202ENST00000524646 ARHGEF10O15013 1369 aa11.19□□□□□ -0.62
PKP3-202ENST00000524646 ROBO2Q9HCK4 1378 aa11.19□□□□□ -0.62
PKP3-202ENST00000524646 TWISTNBQ3B726 338 aaPredicted RBP11.19□□□□□ -0.62
PKP3-202ENST00000524646 CFAP44Q96MT7 982 aa11.19□□□□□ -0.62
PKP3-202ENST00000524646 CCDC61Q9Y6R9 512 aa11.19□□□□□ -0.62
PKP3-202ENST00000524646 SLIT1O75093 1534 aa11.19□□□□□ -0.62
PKP3-202ENST00000524646 USP31Q70CQ4 1352 aa11.18□□□□□ -0.62
PKP3-202ENST00000524646 ZBTB7BO15156 539 aaPredicted RBP11.18□□□□□ -0.62
PKP3-202ENST00000524646 L1TD1Q5T7N2 865 aaKnown RBP11.18□□□□□ -0.62
PKP3-202ENST00000524646 TSPYL6Q8N831 410 aa11.18□□□□□ -0.62
PKP3-202ENST00000524646 SNX21Q969T3 373 aa11.18□□□□□ -0.62
PKP3-202ENST00000524646 ZRANB1Q9UGI0 708 aa11.18□□□□□ -0.62
PKP3-202ENST00000524646 KIAA0232Q92628 1395 aa11.17□□□□□ -0.62
PKP3-202ENST00000524646 FBLN1P23142 703 aa11.17□□□□□ -0.62
PKP3-202ENST00000524646 HDGFP51858 240 aaKnown RBP11.17□□□□□ -0.62
PKP3-202ENST00000524646 TXNDC2Q86VQ3 553 aa11.17□□□□□ -0.62
PKP3-202ENST00000524646 ARHGAP23Q9P227 1491 aa11.17□□□□□ -0.62
PKP3-202ENST00000524646 AK9Q5TCS8 1911 aa11.17□□□□□ -0.62
PKP3-202ENST00000524646 SSH2Q76I76 1423 aa11.17□□□□□ -0.62
PKP3-202ENST00000524646 LTN1O94822 1766 aa11.16□□□□□ -0.62
PKP3-202ENST00000524646 MCM4P33991 863 aa11.16□□□□□ -0.62
PKP3-202ENST00000524646 HAP1P54257 671 aaPredicted RBP11.16□□□□□ -0.62
PKP3-202ENST00000524646 MLECQ14165 292 aa11.16□□□□□ -0.62
PKP3-202ENST00000524646 RRS1Q15050 365 aaKnown RBP11.16□□□□□ -0.62
PKP3-202ENST00000524646 ZNF692Q9BU19 519 aaPredicted RBP11.16□□□□□ -0.62
PKP3-202ENST00000524646 C1orf115Q9H7X2 142 aa11.16□□□□□ -0.62
PKP3-202ENST00000524646 CIZ1Q9ULV3 898 aaPredicted RBP11.16□□□□□ -0.62
PKP3-202ENST00000524646 MSH6P52701 1360 aa11.16□□□□□ -0.62
PKP3-202ENST00000524646 TTC21BQ7Z4L5 1316 aa11.15□□□□□ -0.62
PKP3-202ENST00000524646 DDX11L8A8MPP1 907 aa11.15□□□□□ -0.62
PKP3-202ENST00000524646 EIF5BO60841 1220 aaKnown RBP11.15□□□□□ -0.62
PKP3-202ENST00000524646 DDIT3P35638 169 aa11.15□□□□□ -0.62
PKP3-202ENST00000524646 ESF1Q9H501 851 aaKnown RBP11.15□□□□□ -0.62
PKP3-202ENST00000524646 RTN4Q9NQC3 1192 aaKnown RBP11.15□□□□□ -0.62
PKP3-202ENST00000524646 CDC45O75419 566 aa11.14□□□□□ -0.63
PKP3-202ENST00000524646 EIF4A2Q14240 407 aaKnown RBP11.14□□□□□ -0.63
PKP3-202ENST00000524646 ANKRD45Q5TZF3 282 aa11.14□□□□□ -0.63
PKP3-202ENST00000524646 C8orf58Q8NAV2 365 aa11.14□□□□□ -0.63
PKP3-202ENST00000524646 CRB1P82279 1406 aa11.14□□□□□ -0.63
PKP3-202ENST00000524646 PTPRUQ92729 1446 aa11.14□□□□□ -0.63
PKP3-202ENST00000524646 NCKAP5LQ9HCH0 1330 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms