RNA–Protein interactions for RNA: ENST00000524361.5

LINC00534-204, long intergenic non-protein coding RNA 534, humanhuman

TSL 3

Gene LINC00534, Length 620 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-204ENST00000524361 ACIN1Q9UKV3 1341 aaKnown RBP9.04□□□□□ -0.96
LINC00534-204ENST00000524361 SEPT12Q8IYM1 358 aa9.03□□□□□ -0.96
LINC00534-204ENST00000524361 CDC42BPGQ6DT37 1551 aa9.03□□□□□ -0.96
LINC00534-204ENST00000524361 PRR36Q9H6K5 1346 aa9.03□□□□□ -0.96
LINC00534-204ENST00000524361 A0A0G2JS52 829 aa9.02□□□□□ -0.97
LINC00534-204ENST00000524361 WASLO00401 505 aaPredicted RBP9.02□□□□□ -0.97
LINC00534-204ENST00000524361 MYT1Q01538 1121 aa9.02□□□□□ -0.97
LINC00534-204ENST00000524361 NUTM2GQ5VZR2 741 aa9.02□□□□□ -0.97
LINC00534-204ENST00000524361 SLAIN1Q8ND83 568 aa9.02□□□□□ -0.97
LINC00534-204ENST00000524361 NGDNQ8NEJ9 315 aaKnown RBP9.02□□□□□ -0.97
LINC00534-204ENST00000524361 DEFB132Q7Z7B7 95 aa9.01□□□□□ -0.97
LINC00534-204ENST00000524361 SPRYD3Q8NCJ5 442 aa9.01□□□□□ -0.97
LINC00534-204ENST00000524361 BTG4Q9NY30 223 aa9.01□□□□□ -0.97
LINC00534-204ENST00000524361 LAMC1P11047 1609 aa9.01□□□□□ -0.97
LINC00534-204ENST00000524361 NRXN1Q9ULB1 1477 aa9.01□□□□□ -0.97
LINC00534-204ENST00000524361 PDAP1Q13442 181 aaKnown RBP9□□□□□ -0.97
LINC00534-204ENST00000524361 VPS72Q15906 364 aa9□□□□□ -0.97
LINC00534-204ENST00000524361 FAM98CQ17RN3 349 aaKnown RBP9□□□□□ -0.97
LINC00534-204ENST00000524361 NBPF1Q3BBV0 1214 aa9□□□□□ -0.97
LINC00534-204ENST00000524361 FAM182BQ5T319 152 aa9□□□□□ -0.97
LINC00534-204ENST00000524361 NUDT16Q96DE0 195 aaKnown RBP9□□□□□ -0.97
LINC00534-204ENST00000524361 CDK19Q9BWU1 502 aa9□□□□□ -0.97
LINC00534-204ENST00000524361 PLSCR2Q9NRY7 297 aa9□□□□□ -0.97
LINC00534-204ENST00000524361 RALGAPBQ86X10 1494 aa9□□□□□ -0.97
LINC00534-204ENST00000524361 SBNO1A3KN83 1393 aa8.99□□□□□ -0.97
LINC00534-204ENST00000524361 TNS3Q68CZ2 1445 aa8.99□□□□□ -0.97
LINC00534-204ENST00000524361 HRCP23327 699 aa8.99□□□□□ -0.97
LINC00534-204ENST00000524361 CCDC125Q86Z20 511 aa8.99□□□□□ -0.97
LINC00534-204ENST00000524361 TSHZ2Q9NRE2 1034 aa8.99□□□□□ -0.97
LINC00534-204ENST00000524361 SLIT2O94813 1529 aa8.99□□□□□ -0.97
LINC00534-204ENST00000524361 GPRASP1Q5JY77 1395 aa8.99□□□□□ -0.97
LINC00534-204ENST00000524361 ONECUT3O60422 494 aaPredicted RBP8.98□□□□□ -0.97
LINC00534-204ENST00000524361 ZC3H6P61129 1189 aaKnown RBP8.98□□□□□ -0.97
LINC00534-204ENST00000524361 CHRNA2Q15822 529 aa8.98□□□□□ -0.97
LINC00534-204ENST00000524361 KRT27Q7Z3Y8 459 aa8.98□□□□□ -0.97
LINC00534-204ENST00000524361 ARHGEF10O15013 1369 aa8.98□□□□□ -0.97
LINC00534-204ENST00000524361 COL22A1Q8NFW1 1626 aaPredicted RBP8.98□□□□□ -0.97
LINC00534-204ENST00000524361 MKRN3Q13064 507 aaKnown RBP8.97□□□□□ -0.97
LINC00534-204ENST00000524361 SF3B2Q13435 895 aaKnown RBP8.97□□□□□ -0.97
LINC00534-204ENST00000524361 SRCAPQ6ZRS2 3230 aa8.97□□□□□ -0.97
LINC00534-204ENST00000524361 ADGRB1O14514 1584 aa8.96□□□□□ -0.97
LINC00534-204ENST00000524361 NBPF8Q3BBV2 869 aa8.96□□□□□ -0.98
LINC00534-204ENST00000524361 STAC3Q96MF2 364 aa8.96□□□□□ -0.98
LINC00534-204ENST00000524361 PRDM11Q9NQV5 511 aa8.96□□□□□ -0.98
LINC00534-204ENST00000524361 STRN4Q9NRL3 753 aa8.96□□□□□ -0.98
LINC00534-204ENST00000524361 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.96□□□□□ -0.98
LINC00534-204ENST00000524361 USP35Q9P2H5 1018 aa8.96□□□□□ -0.98
LINC00534-204ENST00000524361 IFT172Q9UG01 1749 aa8.96□□□□□ -0.98
LINC00534-204ENST00000524361 ANKARQ7Z5J8 1434 aa8.96□□□□□ -0.98
LINC00534-204ENST00000524361 FMN2Q9NZ56 1722 aa8.95□□□□□ -0.98
LINC00534-204ENST00000524361 GOLGA2Q08379 1002 aa8.95□□□□□ -0.98
LINC00534-204ENST00000524361 NEUROD1Q13562 356 aa8.95□□□□□ -0.98
LINC00534-204ENST00000524361 SIN3AQ96ST3 1273 aa8.95□□□□□ -0.98
LINC00534-204ENST00000524361 CABP2Q9NPB3 220 aa8.95□□□□□ -0.98
LINC00534-204ENST00000524361 ACEP12821 1306 aa8.95□□□□□ -0.98
LINC00534-204ENST00000524361 ST18O60284 1047 aa8.94□□□□□ -0.98
LINC00534-204ENST00000524361 EVA1CP58658 441 aa8.94□□□□□ -0.98
LINC00534-204ENST00000524361 SRPK2P78362 688 aaKnown RBP8.94□□□□□ -0.98
LINC00534-204ENST00000524361 DPY19L2Q6NUT2 758 aa8.94□□□□□ -0.98
LINC00534-204ENST00000524361 PCDH10Q9P2E7 1040 aa8.94□□□□□ -0.98
LINC00534-204ENST00000524361 DLC1Q96QB1 1528 aa8.94□□□□□ -0.98
LINC00534-204ENST00000524361 GLI3P10071 1580 aa8.94□□□□□ -0.98
LINC00534-204ENST00000524361 ZBTB7CA1YPR0 619 aa8.93□□□□□ -0.98
LINC00534-204ENST00000524361 PSDA5PKW4 1024 aaPredicted RBP8.93□□□□□ -0.98
LINC00534-204ENST00000524361 EN1Q05925 392 aaPredicted RBP8.93□□□□□ -0.98
LINC00534-204ENST00000524361 ABTB2Q8N961 1025 aa8.93□□□□□ -0.98
LINC00534-204ENST00000524361 L3MBTL2Q969R5 705 aa8.93□□□□□ -0.98
LINC00534-204ENST00000524361 SPATA31A5Q5VU36 1347 aa8.93□□□□□ -0.98
LINC00534-204ENST00000524361 SPATA31A7Q8IWB4 1347 aa8.93□□□□□ -0.98
LINC00534-204ENST00000524361 KIAA0232Q92628 1395 aa8.93□□□□□ -0.98
LINC00534-204ENST00000524361 BLMP54132 1417 aaPredicted RBP8.93□□□□□ -0.98
LINC00534-204ENST00000524361 KNDC1Q76NI1 1749 aa8.93□□□□□ -0.98
LINC00534-204ENST00000524361 KIF1AQ12756 1690 aa8.92□□□□□ -0.98
LINC00534-204ENST00000524361 USP32Q8NFA0 1604 aa8.92□□□□□ -0.98
LINC00534-204ENST00000524361 EIF3AQ14152 1382 aaKnown RBP8.92□□□□□ -0.98
LINC00534-204ENST00000524361 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.92□□□□□ -0.98
LINC00534-204ENST00000524361 RGPD8O14715 1765 aaPredicted RBP8.91□□□□□ -0.98
LINC00534-204ENST00000524361 TULP4Q9NRJ4 1543 aa8.91□□□□□ -0.98
LINC00534-204ENST00000524361 PLEKHG3A1L390 1219 aa8.91□□□□□ -0.98
LINC00534-204ENST00000524361 CABP1Q9NZU7 370 aa8.91□□□□□ -0.98
LINC00534-204ENST00000524361 EP400Q96L91 3159 aa8.9□□□□□ -0.98
LINC00534-204ENST00000524361 SPATA31A1Q5TZJ5 1347 aa8.9□□□□□ -0.98
LINC00534-204ENST00000524361 ECM2O94769 699 aaPredicted RBP8.9□□□□□ -0.98
LINC00534-204ENST00000524361 TRIM37O94972 964 aa8.9□□□□□ -0.98
LINC00534-204ENST00000524361 BAG6P46379 1132 aa8.9□□□□□ -0.98
LINC00534-204ENST00000524361 LARP1Q6PKG0 1096 aaKnown RBP8.9□□□□□ -0.98
LINC00534-204ENST00000524361 RNF25Q96BH1 459 aaPredicted RBP8.9□□□□□ -0.98
LINC00534-204ENST00000524361 L3MBTL3Q96JM7 780 aaPredicted RBP8.9□□□□□ -0.98
LINC00534-204ENST00000524361 CENPJQ9HC77 1338 aaPredicted RBP8.89□□□□□ -0.99
LINC00534-204ENST00000524361 GCP02774 474 aa8.89□□□□□ -0.99
LINC00534-204ENST00000524361 EZH2Q15910 746 aaKnown RBP8.89□□□□□ -0.99
LINC00534-204ENST00000524361 ATP7BP35670 1465 aa8.89□□□□□ -0.99
LINC00534-204ENST00000524361 SOX12O15370 315 aa8.88□□□□□ -0.99
LINC00534-204ENST00000524361 APBA3O96018 575 aa8.88□□□□□ -0.99
LINC00534-204ENST00000524361 NLRP6P59044 892 aa8.88□□□□□ -0.99
LINC00534-204ENST00000524361 PDE3BQ13370 1112 aa8.88□□□□□ -0.99
LINC00534-204ENST00000524361 R3HDM1Q15032 1099 aaKnown RBP8.88□□□□□ -0.99
LINC00534-204ENST00000524361 NLRP13Q86W25 1043 aa8.88□□□□□ -0.99
LINC00534-204ENST00000524361 POLR3AO14802 1390 aaPredicted RBP8.87□□□□□ -0.99
LINC00534-204ENST00000524361 ADGRB2O60241 1585 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms