RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 SF3B2Q13435 895 aaKnown RBP12.15□□□□□ -0.46
CTNNA1-242ENST00000524292 DCAF8Q5TAQ9 597 aa12.15□□□□□ -0.46
CTNNA1-242ENST00000524292 KRT27Q7Z3Y8 459 aa12.15□□□□□ -0.46
CTNNA1-242ENST00000524292 ABTB2Q8N961 1025 aa12.15□□□□□ -0.46
CTNNA1-242ENST00000524292 CABP2Q9NPB3 220 aa12.15□□□□□ -0.46
CTNNA1-242ENST00000524292 BRD4O60885 1362 aaPredicted RBP12.15□□□□□ -0.46
CTNNA1-242ENST00000524292 KIAA0232Q92628 1395 aa12.15□□□□□ -0.46
CTNNA1-242ENST00000524292 TRPM1Q7Z4N2 1603 aa12.15□□□□□ -0.47
CTNNA1-242ENST00000524292 EVC2Q86UK5 1308 aa12.14□□□□□ -0.47
CTNNA1-242ENST00000524292 FAM98CQ17RN3 349 aaKnown RBP12.14□□□□□ -0.47
CTNNA1-242ENST00000524292 NUTM2GQ5VZR2 741 aa12.14□□□□□ -0.47
CTNNA1-242ENST00000524292 PHRF1Q9P1Y6 1649 aaKnown RBP12.14□□□□□ -0.47
CTNNA1-242ENST00000524292 SPATA31A5Q5VU36 1347 aa12.13□□□□□ -0.47
CTNNA1-242ENST00000524292 SPATA31A7Q8IWB4 1347 aa12.13□□□□□ -0.47
CTNNA1-242ENST00000524292 ZC3H6P61129 1189 aaKnown RBP12.13□□□□□ -0.47
CTNNA1-242ENST00000524292 GSE1Q14687 1217 aa12.13□□□□□ -0.47
CTNNA1-242ENST00000524292 BRWD3Q6RI45 1802 aa12.13□□□□□ -0.47
CTNNA1-242ENST00000524292 CHRNA2Q15822 529 aa12.12□□□□□ -0.47
CTNNA1-242ENST00000524292 NLRP13Q86W25 1043 aa12.12□□□□□ -0.47
CTNNA1-242ENST00000524292 USP19O94966 1318 aa12.11□□□□□ -0.47
CTNNA1-242ENST00000524292 NRKQ7Z2Y5 1582 aa12.11□□□□□ -0.47
CTNNA1-242ENST00000524292 STRN4Q9NRL3 753 aa12.11□□□□□ -0.47
CTNNA1-242ENST00000524292 CABP1Q9NZU7 370 aa12.11□□□□□ -0.47
CTNNA1-242ENST00000524292 CPDO75976 1380 aa12.1□□□□□ -0.47
CTNNA1-242ENST00000524292 TONSLQ96HA7 1378 aa12.1□□□□□ -0.47
CTNNA1-242ENST00000524292 EVA1CP58658 441 aa12.1□□□□□ -0.47
CTNNA1-242ENST00000524292 USP6P35125 1406 aa12.1□□□□□ -0.47
CTNNA1-242ENST00000524292 KIF12Q96FN5 646 aa12.09□□□□□ -0.47
CTNNA1-242ENST00000524292 SPATA31A1Q5TZJ5 1347 aa12.09□□□□□ -0.47
CTNNA1-242ENST00000524292 SRCAPQ6ZRS2 3230 aa12.09□□□□□ -0.47
CTNNA1-242ENST00000524292 THSD7AQ9UPZ6 1657 aa12.08□□□□□ -0.48
CTNNA1-242ENST00000524292 GALR2O43603 387 aaPredicted RBP12.08□□□□□ -0.48
CTNNA1-242ENST00000524292 GCP02774 474 aa12.08□□□□□ -0.48
CTNNA1-242ENST00000524292 NLRP6P59044 892 aa12.08□□□□□ -0.48
CTNNA1-242ENST00000524292 SSH2Q76I76 1423 aa12.08□□□□□ -0.48
CTNNA1-242ENST00000524292 BAG6P46379 1132 aa12.07□□□□□ -0.48
CTNNA1-242ENST00000524292 CARD11Q9BXL7 1154 aa12.07□□□□□ -0.48
CTNNA1-242ENST00000524292 SBNO2Q9Y2G9 1366 aa12.06□□□□□ -0.48
CTNNA1-242ENST00000524292 DEFB132Q7Z7B7 95 aa12.06□□□□□ -0.48
CTNNA1-242ENST00000524292 MS4A3Q96HJ5 214 aa12.06□□□□□ -0.48
CTNNA1-242ENST00000524292 USP35Q9P2H5 1018 aa12.06□□□□□ -0.48
CTNNA1-242ENST00000524292 CIZ1Q9ULV3 898 aaPredicted RBP12.06□□□□□ -0.48
CTNNA1-242ENST00000524292 ZBTB7CA1YPR0 619 aa12.05□□□□□ -0.48
CTNNA1-242ENST00000524292 MAP3K13O43283 966 aa12.05□□□□□ -0.48
CTNNA1-242ENST00000524292 TRIM26Q12899 539 aaPredicted RBP12.05□□□□□ -0.48
CTNNA1-242ENST00000524292 BARGINQ6ZT62 677 aa12.05□□□□□ -0.48
CTNNA1-242ENST00000524292 TCP11L2Q8N4U5 519 aa12.05□□□□□ -0.48
CTNNA1-242ENST00000524292 LMO7Q8WWI1 1683 aa12.05□□□□□ -0.48
CTNNA1-242ENST00000524292 CAMTA1Q9Y6Y1 1673 aa12.05□□□□□ -0.48
CTNNA1-242ENST00000524292 LARP1Q6PKG0 1096 aaKnown RBP12.04□□□□□ -0.48
CTNNA1-242ENST00000524292 THRAP3Q9Y2W1 955 aaKnown RBP12.04□□□□□ -0.48
CTNNA1-242ENST00000524292 SLIT3O75094 1523 aa12.04□□□□□ -0.48
CTNNA1-242ENST00000524292 TTC21AQ8NDW8 1320 aa12.04□□□□□ -0.48
CTNNA1-242ENST00000524292 AATKQ6ZMQ8 1374 aa12.04□□□□□ -0.48
CTNNA1-242ENST00000524292 RGPD1P0DJD0 1748 aa12.03□□□□□ -0.48
CTNNA1-242ENST00000524292 COL5A2P05997 1499 aaPredicted RBP12.03□□□□□ -0.48
CTNNA1-242ENST00000524292 PYGBP11216 843 aa12.03□□□□□ -0.48
CTNNA1-242ENST00000524292 PDE3BQ13370 1112 aa12.03□□□□□ -0.48
CTNNA1-242ENST00000524292 FAM182BQ5T319 152 aa12.03□□□□□ -0.48
CTNNA1-242ENST00000524292 FAM196AQ6ZSG2 479 aa12.03□□□□□ -0.48
CTNNA1-242ENST00000524292 TTC21BQ7Z4L5 1316 aa12.03□□□□□ -0.48
CTNNA1-242ENST00000524292 PIK3C2AO00443 1686 aa12.03□□□□□ -0.48
CTNNA1-242ENST00000524292 KTN1Q86UP2 1357 aaKnown RBP12.03□□□□□ -0.48
CTNNA1-242ENST00000524292 KCNH5Q8NCM2 988 aa12.02□□□□□ -0.49
CTNNA1-242ENST00000524292 SGIP1Q9BQI5 828 aa12.02□□□□□ -0.49
CTNNA1-242ENST00000524292 AKAP12Q02952 1782 aa12.02□□□□□ -0.49
CTNNA1-242ENST00000524292 CRB1P82279 1406 aa12.02□□□□□ -0.49
CTNNA1-242ENST00000524292 CPSF1Q10570 1443 aaKnown RBP12.02□□□□□ -0.49
CTNNA1-242ENST00000524292 PCDHB13Q9Y5F0 798 aa12.01□□□□□ -0.49
CTNNA1-242ENST00000524292 DISP2A7MBM2 1401 aa12.01□□□□□ -0.49
CTNNA1-242ENST00000524292 HDGFL2Q7Z4V5 671 aaPredicted RBP12□□□□□ -0.49
CTNNA1-242ENST00000524292 C11orf95C9JLR9 678 aaPredicted RBP11.99□□□□□ -0.49
CTNNA1-242ENST00000524292 SOX12O15370 315 aa11.99□□□□□ -0.49
CTNNA1-242ENST00000524292 TRIM37O94972 964 aa11.99□□□□□ -0.49
CTNNA1-242ENST00000524292 EN1Q05925 392 aaPredicted RBP11.99□□□□□ -0.49
CTNNA1-242ENST00000524292 TOM1L2Q6ZVM7 507 aa11.99□□□□□ -0.49
CTNNA1-242ENST00000524292 TMC1Q8TDI8 760 aa11.99□□□□□ -0.49
CTNNA1-242ENST00000524292 MON2Q7Z3U7 1717 aa11.98□□□□□ -0.49
CTNNA1-242ENST00000524292 TNS1Q9HBL0 1735 aaKnown RBP11.98□□□□□ -0.49
CTNNA1-242ENST00000524292 SLC24A1O60721 1099 aa11.98□□□□□ -0.49
CTNNA1-242ENST00000524292 CHRM1P11229 460 aaPredicted RBP11.98□□□□□ -0.49
CTNNA1-242ENST00000524292 ARHGEF25Q86VW2 580 aa11.98□□□□□ -0.49
CTNNA1-242ENST00000524292 DCBLD2Q96PD2 775 aa11.98□□□□□ -0.49
CTNNA1-242ENST00000524292 TERF2IPQ9NYB0 399 aa11.98□□□□□ -0.49
CTNNA1-242ENST00000524292 PARD3Q8TEW0 1356 aa11.97□□□□□ -0.49
CTNNA1-242ENST00000524292 WDR17Q8IZU2 1322 aa11.97□□□□□ -0.49
CTNNA1-242ENST00000524292 CSB-PGBD3P0DP91 1061 aa11.97□□□□□ -0.49
CTNNA1-242ENST00000524292 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.97□□□□□ -0.49
CTNNA1-242ENST00000524292 PUS7Q96PZ0 661 aaKnown RBP11.97□□□□□ -0.49
CTNNA1-242ENST00000524292 PARP4Q9UKK3 1724 aaKnown RBP11.97□□□□□ -0.49
CTNNA1-242ENST00000524292 ABCC6O95255 1503 aa11.96□□□□□ -0.49
CTNNA1-242ENST00000524292 EDC4Q6P2E9 1401 aaKnown RBP11.96□□□□□ -0.49
CTNNA1-242ENST00000524292 NINLQ9Y2I6 1382 aa11.96□□□□□ -0.49
CTNNA1-242ENST00000524292 APBA3O96018 575 aa11.96□□□□□ -0.49
CTNNA1-242ENST00000524292 CDCA7Q9BWT1 371 aaPredicted RBP11.96□□□□□ -0.49
CTNNA1-242ENST00000524292 NFAT5O94916 1531 aa11.96□□□□□ -0.5
CTNNA1-242ENST00000524292 OVOS2A0A0G2JMS6 1433 aa11.95□□□□□ -0.5
CTNNA1-242ENST00000524292 OVOS2A0A0J9YW53 1432 aa11.95□□□□□ -0.5
CTNNA1-242ENST00000524292 OVOS2Q6IE36 1432 aa11.95□□□□□ -0.5
CTNNA1-242ENST00000524292 COL18A1P39060 1754 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms