RNA–Protein interactions for RNA: ENST00000524177.5

CSMD1-214, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-214ENST00000524177 DIXDC1Q155Q3 683 aa6.54□□□□□ -1.36
CSMD1-214ENST00000524177 PPP2R2DQ66LE6 453 aa6.54□□□□□ -1.36
CSMD1-214ENST00000524177 RSBN1LQ6PCB5 846 aaPredicted RBP6.54□□□□□ -1.36
CSMD1-214ENST00000524177 FNBP4Q8N3X1 1017 aaPredicted RBP6.54□□□□□ -1.36
CSMD1-214ENST00000524177 CCDC82Q8N4S0 544 aa6.54□□□□□ -1.36
CSMD1-214ENST00000524177 DNMT3LQ9UJW3 386 aa6.54□□□□□ -1.36
CSMD1-214ENST00000524177 ATP1B4Q9UN42 357 aaPredicted RBP6.54□□□□□ -1.36
CSMD1-214ENST00000524177 HRCP23327 699 aa6.53□□□□□ -1.36
CSMD1-214ENST00000524177 TUSC1Q2TAM9 212 aa6.53□□□□□ -1.36
CSMD1-214ENST00000524177 RIC3Q7Z5B4 369 aa6.53□□□□□ -1.36
CSMD1-214ENST00000524177 MEIOBQ8N635 442 aa6.53□□□□□ -1.36
CSMD1-214ENST00000524177 SNRKQ9NRH2 765 aa6.53□□□□□ -1.36
CSMD1-214ENST00000524177 COG6Q9Y2V7 657 aa6.53□□□□□ -1.36
CSMD1-214ENST00000524177 SOS2Q07890 1332 aaPredicted RBP6.52□□□□□ -1.37
CSMD1-214ENST00000524177 SPTLC1O15269 473 aa6.52□□□□□ -1.37
CSMD1-214ENST00000524177 KRT76Q01546 638 aa6.52□□□□□ -1.37
CSMD1-214ENST00000524177 BANK1Q8NDB2 785 aa6.52□□□□□ -1.37
CSMD1-214ENST00000524177 ZBTB3Q9H5J0 574 aa6.52□□□□□ -1.37
CSMD1-214ENST00000524177 PER1O15534 1290 aaPredicted RBP6.51□□□□□ -1.37
CSMD1-214ENST00000524177 FSHRP23945 695 aa6.51□□□□□ -1.37
CSMD1-214ENST00000524177 GJA5P36382 358 aa6.51□□□□□ -1.37
CSMD1-214ENST00000524177 BPHLQ86WA6 291 aaPredicted RBP6.51□□□□□ -1.37
CSMD1-214ENST00000524177 GPR161Q8N6U8 529 aaKnown RBP6.51□□□□□ -1.37
CSMD1-214ENST00000524177 CABLES1Q8TDN4 633 aa6.51□□□□□ -1.37
CSMD1-214ENST00000524177 CNTNAP3BQ96NU0 1288 aa6.51□□□□□ -1.37
CSMD1-214ENST00000524177 CNTNAP3Q9BZ76 1288 aa6.51□□□□□ -1.37
CSMD1-214ENST00000524177 CSPP1Q1MSJ5 1256 aa6.5□□□□□ -1.37
CSMD1-214ENST00000524177 MTMR14Q8NCE2 650 aa6.5□□□□□ -1.37
CSMD1-214ENST00000524177 TSC1Q92574 1164 aa6.5□□□□□ -1.37
CSMD1-214ENST00000524177 GDF11O95390 407 aa6.49□□□□□ -1.37
CSMD1-214ENST00000524177 QPCTQ16769 361 aa6.49□□□□□ -1.37
CSMD1-214ENST00000524177 RAD21O60216 631 aa6.48□□□□□ -1.37
CSMD1-214ENST00000524177 LILRB3O75022 631 aa6.48□□□□□ -1.37
CSMD1-214ENST00000524177 RASSF7Q02833 373 aa6.48□□□□□ -1.37
CSMD1-214ENST00000524177 TMEM259Q4ZIN3 620 aa6.48□□□□□ -1.37
CSMD1-214ENST00000524177 VASH1Q7L8A9 365 aaPredicted RBP6.48□□□□□ -1.37
CSMD1-214ENST00000524177 SH3RF1Q7Z6J0 888 aa6.48□□□□□ -1.37
CSMD1-214ENST00000524177 TMEM151AQ8N4L1 468 aa6.48□□□□□ -1.37
CSMD1-214ENST00000524177 C1QTNF2Q9BXJ5 285 aa6.48□□□□□ -1.37
CSMD1-214ENST00000524177 ZNF777Q9ULD5 760 aaPredicted RBP6.48□□□□□ -1.37
CSMD1-214ENST00000524177 ADAMTS8Q9UP79 889 aa6.48□□□□□ -1.37
CSMD1-214ENST00000524177 TTLL8A6PVC2 850 aa6.47□□□□□ -1.37
CSMD1-214ENST00000524177 PTSQ03393 145 aa6.47□□□□□ -1.37
CSMD1-214ENST00000524177 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.47□□□□□ -1.37
CSMD1-214ENST00000524177 PRPF38BQ5VTL8 546 aaKnown RBP6.47□□□□□ -1.37
CSMD1-214ENST00000524177 TSEN34Q9BSV6 310 aaKnown RBP6.47□□□□□ -1.37
CSMD1-214ENST00000524177 MAGEB6P1A0A0J9YX57 407 aa6.46□□□□□ -1.38
CSMD1-214ENST00000524177 FIGNL2A6NMB9 653 aa6.46□□□□□ -1.38
CSMD1-214ENST00000524177 RNF225M0QZC1 329 aaPredicted RBP6.46□□□□□ -1.38
CSMD1-214ENST00000524177 SOCS7O14512 581 aa6.46□□□□□ -1.38
CSMD1-214ENST00000524177 RTL5Q5HYW3 569 aaPredicted RBP6.46□□□□□ -1.38
CSMD1-214ENST00000524177 CCDC116Q8IYX3 515 aa6.46□□□□□ -1.38
CSMD1-214ENST00000524177 COL25A1Q9BXS0 654 aaPredicted RBP6.46□□□□□ -1.38
CSMD1-214ENST00000524177 MAP4K5Q9Y4K4 846 aa6.46□□□□□ -1.38
CSMD1-214ENST00000524177 EMILIN1Q9Y6C2 1016 aa6.46□□□□□ -1.38
CSMD1-214ENST00000524177 USP17L8P0C7I0 530 aa6.45□□□□□ -1.38
CSMD1-214ENST00000524177 NBPF14Q5TI25 921 aa6.45□□□□□ -1.38
CSMD1-214ENST00000524177 ZNF385CQ66K41 422 aaPredicted RBP6.45□□□□□ -1.38
CSMD1-214ENST00000524177 ARMC2Q8NEN0 867 aa6.45□□□□□ -1.38
CSMD1-214ENST00000524177 NUTM2BA6NNL0 878 aaPredicted RBP6.44□□□□□ -1.38
CSMD1-214ENST00000524177 NUTM2EB1AL46 878 aaPredicted RBP6.44□□□□□ -1.38
CSMD1-214ENST00000524177 CBLBQ13191 982 aa6.44□□□□□ -1.38
CSMD1-214ENST00000524177 RNFT1Q5M7Z0 435 aa6.44□□□□□ -1.38
CSMD1-214ENST00000524177 NUTM2DQ5VT03 806 aaPredicted RBP6.44□□□□□ -1.38
CSMD1-214ENST00000524177 SH3BP5LQ7L8J4 393 aa6.44□□□□□ -1.38
CSMD1-214ENST00000524177 NUTM2AQ8IVF1 878 aaPredicted RBP6.44□□□□□ -1.38
CSMD1-214ENST00000524177 TRMT44Q8IYL2 757 aaKnown RBP6.44□□□□□ -1.38
CSMD1-214ENST00000524177 SVOPQ8N4V2 548 aa6.44□□□□□ -1.38
CSMD1-214ENST00000524177 CARD14Q9BXL6 1004 aa6.44□□□□□ -1.38
CSMD1-214ENST00000524177 GDPD2Q9HCC8 539 aa6.44□□□□□ -1.38
CSMD1-214ENST00000524177 AP1G2O75843 785 aa6.43□□□□□ -1.38
CSMD1-214ENST00000524177 TRIM26Q12899 539 aaPredicted RBP6.43□□□□□ -1.38
CSMD1-214ENST00000524177 CCDC155Q8N6L0 562 aa6.43□□□□□ -1.38
CSMD1-214ENST00000524177 NANOS1Q8WY41 292 aaKnown RBP6.43□□□□□ -1.38
CSMD1-214ENST00000524177 PODXL2Q9NZ53 605 aa6.43□□□□□ -1.38
CSMD1-214ENST00000524177 TBC1D2BQ9UPU7 963 aa6.43□□□□□ -1.38
CSMD1-214ENST00000524177 PPP1R26Q5T8A7 1209 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-214ENST00000524177 WHAMMQ8TF30 809 aa6.42□□□□□ -1.38
CSMD1-214ENST00000524177 CCDC97Q96F63 343 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-214ENST00000524177 ZNF330Q9Y3S2 320 aaPredicted RBP6.42□□□□□ -1.38
CSMD1-214ENST00000524177 SPINT1O43278 529 aa6.41□□□□□ -1.38
CSMD1-214ENST00000524177 GPR37L1O60883 481 aa6.41□□□□□ -1.38
CSMD1-214ENST00000524177 ABL2P42684 1182 aa6.41□□□□□ -1.38
CSMD1-214ENST00000524177 ERFEQ4G0M1 354 aa6.41□□□□□ -1.38
CSMD1-214ENST00000524177 Q6ZVU0 165 aa6.41□□□□□ -1.38
CSMD1-214ENST00000524177 GJD4Q96KN9 370 aaPredicted RBP6.41□□□□□ -1.38
CSMD1-214ENST00000524177 PGPEP1Q9NXJ5 209 aa6.41□□□□□ -1.38
CSMD1-214ENST00000524177 SERPINA10Q9UK55 444 aa6.41□□□□□ -1.38
CSMD1-214ENST00000524177 CDC14CA4D256 554 aa6.4□□□□□ -1.38
CSMD1-214ENST00000524177 SLC35F4A4IF30 521 aa6.4□□□□□ -1.38
CSMD1-214ENST00000524177 POM121CA8CG34 1229 aa6.4□□□□□ -1.38
CSMD1-214ENST00000524177 IRS1P35568 1242 aa6.4□□□□□ -1.38
CSMD1-214ENST00000524177 GPAT2Q6NUI2 795 aa6.4□□□□□ -1.38
CSMD1-214ENST00000524177 HELBQ8NG08 1087 aaPredicted RBP6.4□□□□□ -1.38
CSMD1-214ENST00000524177 HMX1Q9NP08 348 aaPredicted RBP6.4□□□□□ -1.38
CSMD1-214ENST00000524177 ITGA6P23229 1130 aa6.39□□□□□ -1.39
CSMD1-214ENST00000524177 VWA5B2Q8N398 1253 aa6.39□□□□□ -1.39
CSMD1-214ENST00000524177 AGBL1Q96MI9 1066 aa6.39□□□□□ -1.39
CSMD1-214ENST00000524177 ARHGEF15O94989 841 aa6.38□□□□□ -1.39
CSMD1-214ENST00000524177 SLURP2P0DP57 97 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms