RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 PRAG1Q86YV5 1406 aa12.54□□□□□ -0.4
SPIDR-224ENST00000524126 HMGN5P82970 282 aaKnown RBP12.54□□□□□ -0.4
SPIDR-224ENST00000524126 WWC1Q8IX03 1113 aa12.54□□□□□ -0.4
SPIDR-224ENST00000524126 TRPM1Q7Z4N2 1603 aa12.54□□□□□ -0.4
SPIDR-224ENST00000524126 TMF1P82094 1093 aa12.54□□□□□ -0.4
SPIDR-224ENST00000524126 LRSAM1Q6UWE0 723 aa12.54□□□□□ -0.4
SPIDR-224ENST00000524126 CERS3Q8IU89 383 aa12.54□□□□□ -0.4
SPIDR-224ENST00000524126 TRPM2O94759 1503 aa12.53□□□□□ -0.4
SPIDR-224ENST00000524126 EFCAB6Q5THR3 1501 aa12.53□□□□□ -0.4
SPIDR-224ENST00000524126 NOLC1Q14978 699 aaKnown RBP eCLIP12.53□□□□□ -0.4
SPIDR-224ENST00000524126 PTPRTO14522 1441 aa12.52□□□□□ -0.4
SPIDR-224ENST00000524126 FBXO31Q5XUX0 539 aaPredicted RBP12.52□□□□□ -0.4
SPIDR-224ENST00000524126 RNF17Q9BXT8 1623 aaKnown RBP12.52□□□□□ -0.41
SPIDR-224ENST00000524126 MVPQ14764 893 aaKnown RBP12.52□□□□□ -0.41
SPIDR-224ENST00000524126 TTC12Q9H892 705 aaPredicted RBP12.52□□□□□ -0.41
SPIDR-224ENST00000524126 MROH2AA6NES4 1674 aa12.52□□□□□ -0.41
SPIDR-224ENST00000524126 ARHGAP31Q2M1Z3 1444 aa12.51□□□□□ -0.41
SPIDR-224ENST00000524126 PIBF1Q8WXW3 757 aa12.51□□□□□ -0.41
SPIDR-224ENST00000524126 LNPKQ9C0E8 428 aa12.51□□□□□ -0.41
SPIDR-224ENST00000524126 ABCC3O15438 1527 aa12.5□□□□□ -0.41
SPIDR-224ENST00000524126 ADGRF5Q8IZF2 1346 aa12.5□□□□□ -0.41
SPIDR-224ENST00000524126 FOXD4L5Q5VV16 416 aaPredicted RBP12.5□□□□□ -0.41
SPIDR-224ENST00000524126 FOXD4L4Q8WXT5 416 aaPredicted RBP12.5□□□□□ -0.41
SPIDR-224ENST00000524126 ZFP91Q96JP5 570 aaPredicted RBP12.5□□□□□ -0.41
SPIDR-224ENST00000524126 KIF16BQ96L93 1317 aa12.49□□□□□ -0.41
SPIDR-224ENST00000524126 RIOK3O14730 519 aaKnown RBP12.48□□□□□ -0.41
SPIDR-224ENST00000524126 PIK3C2GO75747 1445 aa12.48□□□□□ -0.41
SPIDR-224ENST00000524126 CYP2E1P05181 493 aaPredicted RBP12.48□□□□□ -0.41
SPIDR-224ENST00000524126 CFAP70Q5T0N1 1121 aa12.47□□□□□ -0.41
SPIDR-224ENST00000524126 ANKRD7Q92527 254 aa12.47□□□□□ -0.41
SPIDR-224ENST00000524126 ZBTB9Q96C00 473 aa12.47□□□□□ -0.41
SPIDR-224ENST00000524126 CAMSAP1Q5T5Y3 1602 aa12.47□□□□□ -0.41
SPIDR-224ENST00000524126 FKBP5Q13451 457 aaPredicted RBP12.47□□□□□ -0.41
SPIDR-224ENST00000524126 AEBP1Q8IUX7 1158 aa12.47□□□□□ -0.41
SPIDR-224ENST00000524126 SLFN14P0C7P3 912 aa12.46□□□□□ -0.41
SPIDR-224ENST00000524126 PLPPR3Q6T4P5 718 aa12.46□□□□□ -0.41
SPIDR-224ENST00000524126 ILDR1Q86SU0 546 aaPredicted RBP12.46□□□□□ -0.41
SPIDR-224ENST00000524126 DZIP1LQ8IYY4 767 aaKnown RBP12.46□□□□□ -0.41
SPIDR-224ENST00000524126 ZGPATQ8N5A5 531 aaKnown RBP12.46□□□□□ -0.41
SPIDR-224ENST00000524126 ITPRIPQ8IWB1 547 aa12.46□□□□□ -0.42
SPIDR-224ENST00000524126 GPRASP1Q5JY77 1395 aa12.46□□□□□ -0.42
SPIDR-224ENST00000524126 NUCB2P80303 420 aa12.45□□□□□ -0.42
SPIDR-224ENST00000524126 HDAC1Q13547 482 aaPredicted RBP12.45□□□□□ -0.42
SPIDR-224ENST00000524126 TBC1D9Q6ZT07 1266 aa12.45□□□□□ -0.42
SPIDR-224ENST00000524126 TRERF1Q96PN7 1200 aa12.45□□□□□ -0.42
SPIDR-224ENST00000524126 OGFRQ9NZT2 677 aa12.45□□□□□ -0.42
SPIDR-224ENST00000524126 ZDHHC9Q9Y397 364 aa12.45□□□□□ -0.42
SPIDR-224ENST00000524126 LMTK2Q8IWU2 1503 aa12.45□□□□□ -0.42
SPIDR-224ENST00000524126 CAPN2P17655 700 aa12.45□□□□□ -0.42
SPIDR-224ENST00000524126 TSPY26PQ9H489 355 aa12.45□□□□□ -0.42
SPIDR-224ENST00000524126 USP25Q9UHP3 1055 aa12.45□□□□□ -0.42
SPIDR-224ENST00000524126 MADDQ8WXG6 1647 aa12.45□□□□□ -0.42
SPIDR-224ENST00000524126 IDI1Q13907 227 aa12.44□□□□□ -0.42
SPIDR-224ENST00000524126 SYNMO15061 1565 aa12.44□□□□□ -0.42
SPIDR-224ENST00000524126 ERICH4A6NGS2 130 aa12.44□□□□□ -0.42
SPIDR-224ENST00000524126 ZKSCAN2Q63HK3 967 aa12.44□□□□□ -0.42
SPIDR-224ENST00000524126 NOS1P29475 1434 aa12.44□□□□□ -0.42
SPIDR-224ENST00000524126 KIF1BO60333 1816 aa12.44□□□□□ -0.42
SPIDR-224ENST00000524126 ASXL1Q8IXJ9 1541 aa12.43□□□□□ -0.42
SPIDR-224ENST00000524126 TRIM6-TRIM34B2RNG4 842 aa12.43□□□□□ -0.42
SPIDR-224ENST00000524126 IRX3P78415 501 aaPredicted RBP12.43□□□□□ -0.42
SPIDR-224ENST00000524126 TRIM34Q9BYJ4 488 aa12.43□□□□□ -0.42
SPIDR-224ENST00000524126 SPTLC3Q9NUV7 552 aa12.43□□□□□ -0.42
SPIDR-224ENST00000524126 NUCB1Q02818 461 aa12.42□□□□□ -0.42
SPIDR-224ENST00000524126 GABPB1Q06547 395 aaPredicted RBP12.42□□□□□ -0.42
SPIDR-224ENST00000524126 TMEM132EQ6IEE7 984 aa12.42□□□□□ -0.42
SPIDR-224ENST00000524126 DNAJC2Q99543 621 aaKnown RBP12.42□□□□□ -0.42
SPIDR-224ENST00000524126 FEZ1Q99689 392 aa12.42□□□□□ -0.42
SPIDR-224ENST00000524126 NCBP1Q09161 790 aaKnown RBP12.42□□□□□ -0.42
SPIDR-224ENST00000524126 NAA30Q147X3 362 aaPredicted RBP12.42□□□□□ -0.42
SPIDR-224ENST00000524126 MYO5BQ9ULV0 1848 aa12.42□□□□□ -0.42
SPIDR-224ENST00000524126 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.41□□□□□ -0.42
SPIDR-224ENST00000524126 SECISBP2LQ93073 1101 aaKnown RBP12.41□□□□□ -0.42
SPIDR-224ENST00000524126 TIGD1Q96MW7 591 aa12.41□□□□□ -0.42
SPIDR-224ENST00000524126 CTNNA3Q9UI47 895 aa12.41□□□□□ -0.42
SPIDR-224ENST00000524126 PYCARDQ9ULZ3 195 aa12.41□□□□□ -0.42
SPIDR-224ENST00000524126 ADCY5O95622 1261 aa12.41□□□□□ -0.42
SPIDR-224ENST00000524126 TRIM27P14373 513 aa12.41□□□□□ -0.42
SPIDR-224ENST00000524126 BMP2KLQ5H9B9 411 aa12.41□□□□□ -0.42
SPIDR-224ENST00000524126 CHD1LQ86WJ1 897 aa12.41□□□□□ -0.42
SPIDR-224ENST00000524126 CLTCQ00610 1675 aaKnown RBP12.4□□□□□ -0.42
SPIDR-224ENST00000524126 CTIFO43310 598 aaKnown RBP12.4□□□□□ -0.42
SPIDR-224ENST00000524126 TPRNQ4KMQ1 711 aa12.4□□□□□ -0.42
SPIDR-224ENST00000524126 TCP11L2Q8N4U5 519 aa12.4□□□□□ -0.42
SPIDR-224ENST00000524126 CHMP4CQ96CF2 233 aa12.4□□□□□ -0.42
SPIDR-224ENST00000524126 CCDC66A2RUB6 948 aa12.4□□□□□ -0.43
SPIDR-224ENST00000524126 TERF2Q15554 542 aa12.4□□□□□ -0.43
SPIDR-224ENST00000524126 SMC4Q9NTJ3 1288 aa12.4□□□□□ -0.43
SPIDR-224ENST00000524126 FOXD4L6Q3SYB3 417 aaPredicted RBP12.39□□□□□ -0.43
SPIDR-224ENST00000524126 FOXD4L3Q6VB84 417 aaPredicted RBP12.39□□□□□ -0.43
SPIDR-224ENST00000524126 RGS22Q8NE09 1264 aa12.39□□□□□ -0.43
SPIDR-224ENST00000524126 DIAPH3Q9NSV4 1193 aa12.39□□□□□ -0.43
SPIDR-224ENST00000524126 ADGRB3O60242 1522 aa12.39□□□□□ -0.43
SPIDR-224ENST00000524126 SLC20A2Q08357 652 aa12.39□□□□□ -0.43
SPIDR-224ENST00000524126 CHAF1AQ13111 956 aaPredicted RBP12.39□□□□□ -0.43
SPIDR-224ENST00000524126 ANKRD45Q5TZF3 282 aa12.39□□□□□ -0.43
SPIDR-224ENST00000524126 TMEM57Q8N5G2 664 aa12.39□□□□□ -0.43
SPIDR-224ENST00000524126 TSR2Q969E8 191 aaKnown RBP12.39□□□□□ -0.43
SPIDR-224ENST00000524126 PLCB2Q00722 1185 aa12.38□□□□□ -0.43
SPIDR-224ENST00000524126 CDCA8Q53HL2 280 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms