RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 ZFAND3Q9H8U3 227 aa9.66□□□□□ -0.86
PCM1-219ENST00000523540 ZIC2O95409 532 aaPredicted RBP9.65□□□□□ -0.86
PCM1-219ENST00000523540 NR3C2P08235 984 aa9.65□□□□□ -0.86
PCM1-219ENST00000523540 LRRN4Q8WUT4 740 aa9.65□□□□□ -0.86
PCM1-219ENST00000523540 FOXJ1Q92949 421 aa9.65□□□□□ -0.86
PCM1-219ENST00000523540 ITPKCQ96DU7 683 aa9.65□□□□□ -0.86
PCM1-219ENST00000523540 MAP10Q9P2G4 905 aa9.65□□□□□ -0.86
PCM1-219ENST00000523540 GPSM3Q9Y4H4 160 aa9.65□□□□□ -0.86
PCM1-219ENST00000523540 PPFIA3O75145 1194 aa9.64□□□□□ -0.87
PCM1-219ENST00000523540 CTHP32929 405 aa9.64□□□□□ -0.87
PCM1-219ENST00000523540 HMX1Q9NP08 348 aaPredicted RBP9.64□□□□□ -0.87
PCM1-219ENST00000523540 GRM5P41594 1212 aa9.63□□□□□ -0.87
PCM1-219ENST00000523540 NR5A1Q13285 461 aa9.63□□□□□ -0.87
PCM1-219ENST00000523540 C4orf48Q5BLP8 95 aa9.63□□□□□ -0.87
PCM1-219ENST00000523540 MAN1A2O60476 641 aa9.62□□□□□ -0.87
PCM1-219ENST00000523540 SUZ12Q15022 739 aaKnown RBP9.62□□□□□ -0.87
PCM1-219ENST00000523540 GJD4Q96KN9 370 aaPredicted RBP9.62□□□□□ -0.87
PCM1-219ENST00000523540 FKBPLQ9UIM3 349 aa9.62□□□□□ -0.87
PCM1-219ENST00000523540 PDXDC2PQ6P474 469 aa9.61□□□□□ -0.87
PCM1-219ENST00000523540 MEIOBQ8N635 442 aa9.61□□□□□ -0.87
PCM1-219ENST00000523540 TRIM34Q9BYJ4 488 aa9.61□□□□□ -0.87
PCM1-219ENST00000523540 C6orf118Q5T5N4 469 aa9.6□□□□□ -0.87
PCM1-219ENST00000523540 TIMELESSQ9UNS1 1208 aa9.6□□□□□ -0.87
PCM1-219ENST00000523540 SOS2Q07890 1332 aaPredicted RBP9.59□□□□□ -0.87
PCM1-219ENST00000523540 ARID5BQ14865 1188 aa9.59□□□□□ -0.87
PCM1-219ENST00000523540 SH3BP5LQ7L8J4 393 aa9.59□□□□□ -0.87
PCM1-219ENST00000523540 SH3RF1Q7Z6J0 888 aa9.59□□□□□ -0.87
PCM1-219ENST00000523540 C14orf37Q86TY3 774 aa9.59□□□□□ -0.87
PCM1-219ENST00000523540 LINC00528Q8N1L1 170 aa9.59□□□□□ -0.87
PCM1-219ENST00000523540 EPS8L1Q8TE68 723 aa9.59□□□□□ -0.87
PCM1-219ENST00000523540 PRM3Q9NNZ6 103 aa9.59□□□□□ -0.87
PCM1-219ENST00000523540 KRT76Q01546 638 aa9.58□□□□□ -0.88
PCM1-219ENST00000523540 NR6A1Q15406 480 aa9.58□□□□□ -0.88
PCM1-219ENST00000523540 ERICH6Q7L0X2 663 aa9.58□□□□□ -0.88
PCM1-219ENST00000523540 BPHLQ86WA6 291 aaPredicted RBP9.58□□□□□ -0.88
PCM1-219ENST00000523540 C1QTNF2Q9BXJ5 285 aa9.58□□□□□ -0.88
PCM1-219ENST00000523540 DNMT3LQ9UJW3 386 aa9.58□□□□□ -0.88
PCM1-219ENST00000523540 NDUFB9Q9Y6M9 179 aa9.58□□□□□ -0.88
PCM1-219ENST00000523540 UBTFP17480 764 aaKnown RBP9.57□□□□□ -0.88
PCM1-219ENST00000523540 BMP2P12643 396 aa9.56□□□□□ -0.88
PCM1-219ENST00000523540 TRMT44Q8IYL2 757 aaKnown RBP9.56□□□□□ -0.88
PCM1-219ENST00000523540 KCTD17Q8N5Z5 321 aa9.56□□□□□ -0.88
PCM1-219ENST00000523540 ZNF592Q92610 1267 aa9.56□□□□□ -0.88
PCM1-219ENST00000523540 POM121Q96HA1 1249 aa9.56□□□□□ -0.88
PCM1-219ENST00000523540 COG6Q9Y2V7 657 aa9.56□□□□□ -0.88
PCM1-219ENST00000523540 GPR37L1O60883 481 aa9.55□□□□□ -0.88
PCM1-219ENST00000523540 GPR161Q8N6U8 529 aaKnown RBP9.55□□□□□ -0.88
PCM1-219ENST00000523540 MAP4K5Q9Y4K4 846 aa9.55□□□□□ -0.88
PCM1-219ENST00000523540 PTK2Q05397 1052 aa9.54□□□□□ -0.88
PCM1-219ENST00000523540 CLUAP1Q96AJ1 413 aa9.54□□□□□ -0.88
PCM1-219ENST00000523540 ZMYND15Q9H091 742 aa9.54□□□□□ -0.88
PCM1-219ENST00000523540 CDV3Q9UKY7 258 aaKnown RBP9.54□□□□□ -0.88
PCM1-219ENST00000523540 TBC1D2BQ9UPU7 963 aa9.54□□□□□ -0.88
PCM1-219ENST00000523540 UPP2O95045 317 aa9.53□□□□□ -0.88
PCM1-219ENST00000523540 GDPD2Q9HCC8 539 aa9.53□□□□□ -0.88
PCM1-219ENST00000523540 A6NJR5 290 aa9.52□□□□□ -0.89
PCM1-219ENST00000523540 MCCD1P59942 119 aaPredicted RBP9.51□□□□□ -0.89
PCM1-219ENST00000523540 RASSF7Q02833 373 aa9.51□□□□□ -0.89
PCM1-219ENST00000523540 AGERQ15109 404 aa9.51□□□□□ -0.89
PCM1-219ENST00000523540 TMEM151AQ8N4L1 468 aa9.51□□□□□ -0.89
PCM1-219ENST00000523540 TSEN34Q9BSV6 310 aaKnown RBP9.51□□□□□ -0.89
PCM1-219ENST00000523540 RAD21O60216 631 aa9.5□□□□□ -0.89
PCM1-219ENST00000523540 FSHRP23945 695 aa9.5□□□□□ -0.89
PCM1-219ENST00000523540 NANOS1Q8WY41 292 aaKnown RBP9.5□□□□□ -0.89
PCM1-219ENST00000523540 ADAMTS8Q9UP79 889 aa9.5□□□□□ -0.89
PCM1-219ENST00000523540 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.49□□□□□ -0.892e-6■■■■□ 20.8
PCM1-219ENST00000523540 FNBP4Q8N3X1 1017 aaPredicted RBP9.49□□□□□ -0.89
PCM1-219ENST00000523540 CNTNAP3BQ96NU0 1288 aa9.49□□□□□ -0.89
PCM1-219ENST00000523540 ARHGAP9Q9BRR9 750 aa9.49□□□□□ -0.89
PCM1-219ENST00000523540 CNTNAP3Q9BZ76 1288 aa9.49□□□□□ -0.89
PCM1-219ENST00000523540 ZBBXA8MT70 800 aa9.48□□□□□ -0.89
PCM1-219ENST00000523540 GDF11O95390 407 aa9.48□□□□□ -0.89
PCM1-219ENST00000523540 PTSQ03393 145 aa9.48□□□□□ -0.89
PCM1-219ENST00000523540 IRF5Q13568 498 aa9.48□□□□□ -0.89
PCM1-219ENST00000523540 CCDC125Q86Z20 511 aa9.48□□□□□ -0.89
PCM1-219ENST00000523540 EMILIN1Q9Y6C2 1016 aa9.48□□□□□ -0.89
PCM1-219ENST00000523540 ABL2P42684 1182 aa9.47□□□□□ -0.89
PCM1-219ENST00000523540 OCSTAMPQ9BR26 566 aa9.47□□□□□ -0.89
PCM1-219ENST00000523540 ZNF330Q9Y3S2 320 aaPredicted RBP9.47□□□□□ -0.89
PCM1-219ENST00000523540 TTLL8A6PVC2 850 aa9.46□□□□□ -0.9
PCM1-219ENST00000523540 RNF225M0QZC1 329 aaPredicted RBP9.46□□□□□ -0.9
PCM1-219ENST00000523540 NR1H3Q13133 447 aa9.46□□□□□ -0.9
PCM1-219ENST00000523540 ERFEQ4G0M1 354 aa9.46□□□□□ -0.9
PCM1-219ENST00000523540 ZNF385CQ66K41 422 aaPredicted RBP9.46□□□□□ -0.9
PCM1-219ENST00000523540 VASH1Q7L8A9 365 aaPredicted RBP9.46□□□□□ -0.9
PCM1-219ENST00000523540 PROSER2Q86WR7 435 aaPredicted RBP9.46□□□□□ -0.9
PCM1-219ENST00000523540 CCDC116Q8IYX3 515 aa9.46□□□□□ -0.9
PCM1-219ENST00000523540 COL25A1Q9BXS0 654 aaPredicted RBP9.46□□□□□ -0.9
PCM1-219ENST00000523540 WASHC4Q2M389 1173 aa9.45□□□□□ -0.9
PCM1-219ENST00000523540 Q6ZVU0 165 aa9.45□□□□□ -0.9
PCM1-219ENST00000523540 TRAK2O60296 914 aa9.44□□□□□ -0.9
PCM1-219ENST00000523540 RNFT1Q5M7Z0 435 aa9.44□□□□□ -0.9
PCM1-219ENST00000523540 ZBTB33Q86T24 672 aa9.44□□□□□ -0.9
PCM1-219ENST00000523540 SLC35F4A4IF30 521 aa9.43□□□□□ -0.9
PCM1-219ENST00000523540 SPINT1O43278 529 aa9.43□□□□□ -0.9
PCM1-219ENST00000523540 SLURP2P0DP57 97 aa9.43□□□□□ -0.9
PCM1-219ENST00000523540 SOX11P35716 441 aa9.43□□□□□ -0.9
PCM1-219ENST00000523540 NBPF20Q3BBV1 942 aa9.43□□□□□ -0.9
PCM1-219ENST00000523540 WWC1Q8IX03 1113 aa9.43□□□□□ -0.9
PCM1-219ENST00000523540 CCDC155Q8N6L0 562 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms