RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 CHMP5Q9NZZ3 219 aa15.93■□□□□ 0.14
PCDHGB1-201ENST00000523390 KIF3AQ9Y496 699 aa15.92■□□□□ 0.14
PCDHGB1-201ENST00000523390 SIL1Q9H173 461 aa15.92■□□□□ 0.14
PCDHGB1-201ENST00000523390 NCKAP5LQ9HCH0 1330 aa15.92■□□□□ 0.14
PCDHGB1-201ENST00000523390 ZMYM3Q14202 1370 aa15.92■□□□□ 0.14
PCDHGB1-201ENST00000523390 MSNP26038 577 aaKnown RBP15.92■□□□□ 0.14
PCDHGB1-201ENST00000523390 TTC21BQ7Z4L5 1316 aa15.92■□□□□ 0.14
PCDHGB1-201ENST00000523390 H3BQV1 296 aa15.92■□□□□ 0.14
PCDHGB1-201ENST00000523390 IFFO2Q5TF58 517 aa15.92■□□□□ 0.14
PCDHGB1-201ENST00000523390 MPRIPQ6WCQ1 1025 aa15.92■□□□□ 0.14
PCDHGB1-201ENST00000523390 CHD1LQ86WJ1 897 aa15.91■□□□□ 0.14
PCDHGB1-201ENST00000523390 NRDCO43847 1150 aa15.91■□□□□ 0.14
PCDHGB1-201ENST00000523390 PIP4K2BP78356 416 aa15.91■□□□□ 0.14
PCDHGB1-201ENST00000523390 VPS37DQ86XT2 251 aa15.91■□□□□ 0.14
PCDHGB1-201ENST00000523390 FSD1Q9BTV5 496 aa15.91■□□□□ 0.14
PCDHGB1-201ENST00000523390 KRT28Q7Z3Y7 464 aa15.91■□□□□ 0.14
PCDHGB1-201ENST00000523390 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.91■□□□□ 0.14
PCDHGB1-201ENST00000523390 RNF20Q5VTR2 975 aa15.9■□□□□ 0.14
PCDHGB1-201ENST00000523390 MBD5Q9P267 1494 aa15.9■□□□□ 0.14
PCDHGB1-201ENST00000523390 ABCA8O94911 1581 aa15.9■□□□□ 0.14
PCDHGB1-201ENST00000523390 SRGAP3O43295 1099 aa15.9■□□□□ 0.14
PCDHGB1-201ENST00000523390 GSE1Q14687 1217 aa15.9■□□□□ 0.14
PCDHGB1-201ENST00000523390 F6X3S4 739 aa15.9■□□□□ 0.14
PCDHGB1-201ENST00000523390 TAF7Q15545 349 aaPredicted RBP15.9■□□□□ 0.14
PCDHGB1-201ENST00000523390 PPIP5K1Q6PFW1 1433 aa15.9■□□□□ 0.14
PCDHGB1-201ENST00000523390 TRIM27P14373 513 aa15.89■□□□□ 0.13
PCDHGB1-201ENST00000523390 SF3A1Q15459 793 aaKnown RBP15.89■□□□□ 0.13
PCDHGB1-201ENST00000523390 IL1RAPL2Q9NP60 686 aa15.89■□□□□ 0.13
PCDHGB1-201ENST00000523390 UHRF1BP1Q6BDS2 1440 aa15.89■□□□□ 0.13
PCDHGB1-201ENST00000523390 PTCD1O75127 700 aaKnown RBP15.89■□□□□ 0.13
PCDHGB1-201ENST00000523390 CNTROBQ8N137 903 aa15.89■□□□□ 0.13
PCDHGB1-201ENST00000523390 LRRCC1Q9C099 1032 aa15.89■□□□□ 0.13
PCDHGB1-201ENST00000523390 EIF2AK4Q9P2K8 1649 aaKnown RBP15.89■□□□□ 0.13
PCDHGB1-201ENST00000523390 MAST1Q9Y2H9 1570 aa15.89■□□□□ 0.13
PCDHGB1-201ENST00000523390 WASHC4Q2M389 1173 aa15.89■□□□□ 0.13
PCDHGB1-201ENST00000523390 BRPF3Q9ULD4 1205 aa15.89■□□□□ 0.13
PCDHGB1-201ENST00000523390 EXOC6BQ9Y2D4 811 aa15.89■□□□□ 0.13
PCDHGB1-201ENST00000523390 CSPP1Q1MSJ5 1256 aa15.89■□□□□ 0.13
PCDHGB1-201ENST00000523390 LRPPRCP42704 1394 aaKnown RBP15.89■□□□□ 0.13
PCDHGB1-201ENST00000523390 ALDH1L2Q3SY69 923 aa15.88■□□□□ 0.13
PCDHGB1-201ENST00000523390 MCTP1Q6DN14 999 aa15.88■□□□□ 0.13
PCDHGB1-201ENST00000523390 KIF6Q6ZMV9 814 aa15.88■□□□□ 0.13
PCDHGB1-201ENST00000523390 DNAJC2Q99543 621 aaKnown RBP15.88■□□□□ 0.13
PCDHGB1-201ENST00000523390 POLKQ9UBT6 870 aa15.88■□□□□ 0.13
PCDHGB1-201ENST00000523390 AEBP1Q8IUX7 1158 aa15.87■□□□□ 0.13
PCDHGB1-201ENST00000523390 RPAP2Q8IXW5 612 aaPredicted RBP15.87■□□□□ 0.13
PCDHGB1-201ENST00000523390 MBIPQ9NS73 344 aa15.86■□□□□ 0.13
PCDHGB1-201ENST00000523390 VPS37CA5D8V6 355 aaPredicted RBP15.86■□□□□ 0.13
PCDHGB1-201ENST00000523390 COL17A1Q9UMD9 1497 aaPredicted RBP15.86■□□□□ 0.13
PCDHGB1-201ENST00000523390 MAP4K4O95819 1239 aaPredicted RBP15.86■□□□□ 0.13
PCDHGB1-201ENST00000523390 NEK4P51957 841 aa15.86■□□□□ 0.13
PCDHGB1-201ENST00000523390 NFKBIBQ15653 356 aa15.86■□□□□ 0.13
PCDHGB1-201ENST00000523390 ATP6V1DQ9Y5K8 247 aa15.86■□□□□ 0.13
PCDHGB1-201ENST00000523390 CHRNA2Q15822 529 aa15.85■□□□□ 0.13
PCDHGB1-201ENST00000523390 A0A1W2PP64 1363 aa15.85■□□□□ 0.13
PCDHGB1-201ENST00000523390 KDM6BO15054 1643 aa15.85■□□□□ 0.13
PCDHGB1-201ENST00000523390 YTHDC2Q9H6S0 1430 aaKnown RBP15.85■□□□□ 0.13
PCDHGB1-201ENST00000523390 KCNA6P17658 529 aa15.85■□□□□ 0.13
PCDHGB1-201ENST00000523390 TRDNQ13061 729 aa15.85■□□□□ 0.13
PCDHGB1-201ENST00000523390 AMOTQ4VCS5 1084 aa15.85■□□□□ 0.13
PCDHGB1-201ENST00000523390 SMC3Q9UQE7 1217 aa15.84■□□□□ 0.13
PCDHGB1-201ENST00000523390 CPLX2Q6PUV4 134 aaKnown RBP15.84■□□□□ 0.13
PCDHGB1-201ENST00000523390 ERC1Q8IUD2 1116 aa15.84■□□□□ 0.13
PCDHGB1-201ENST00000523390 CPLX1O14810 134 aa15.84■□□□□ 0.13
PCDHGB1-201ENST00000523390 SYNE3Q6ZMZ3 975 aa15.83■□□□□ 0.13
PCDHGB1-201ENST00000523390 PUS7Q96PZ0 661 aaKnown RBP15.83■□□□□ 0.13
PCDHGB1-201ENST00000523390 ATP10AO60312 1499 aa15.83■□□□□ 0.12
PCDHGB1-201ENST00000523390 GCC2Q8IWJ2 1684 aa15.83■□□□□ 0.12
PCDHGB1-201ENST00000523390 POLR3AO14802 1390 aaPredicted RBP15.83■□□□□ 0.12
PCDHGB1-201ENST00000523390 FOSBP53539 338 aa15.82■□□□□ 0.12
PCDHGB1-201ENST00000523390 CADPS2Q86UW7 1296 aa15.82■□□□□ 0.12
PCDHGB1-201ENST00000523390 RASSF8Q8NHQ8 419 aa15.82■□□□□ 0.12
PCDHGB1-201ENST00000523390 CCDC85AQ96PX6 553 aaPredicted RBP15.82■□□□□ 0.12
PCDHGB1-201ENST00000523390 SMARCA5O60264 1052 aaPredicted RBP15.82■□□□□ 0.12
PCDHGB1-201ENST00000523390 EIF4A2Q14240 407 aaKnown RBP15.82■□□□□ 0.12
PCDHGB1-201ENST00000523390 ADAMTS2O95450 1211 aa15.82■□□□□ 0.12
PCDHGB1-201ENST00000523390 TTC21AQ8NDW8 1320 aa15.81■□□□□ 0.12
PCDHGB1-201ENST00000523390 AKAP17AQ02040 695 aaKnown RBP15.81■□□□□ 0.12
PCDHGB1-201ENST00000523390 PLEKHH1Q9ULM0 1364 aa15.81■□□□□ 0.12
PCDHGB1-201ENST00000523390 ARHGEF5Q12774 1597 aa15.81■□□□□ 0.12
PCDHGB1-201ENST00000523390 NUCB2P80303 420 aa15.81■□□□□ 0.12
PCDHGB1-201ENST00000523390 ANKRD24Q8TF21 1146 aa15.81■□□□□ 0.12
PCDHGB1-201ENST00000523390 YEATS2Q9ULM3 1422 aa15.81■□□□□ 0.12
PCDHGB1-201ENST00000523390 AACSQ86V21 672 aa15.81■□□□□ 0.12
PCDHGB1-201ENST00000523390 CNNM1Q9NRU3 951 aa15.81■□□□□ 0.12
PCDHGB1-201ENST00000523390 HSPA2P54652 639 aa15.8■□□□□ 0.12
PCDHGB1-201ENST00000523390 SKOR2Q2VWA4 1001 aaPredicted RBP15.8■□□□□ 0.12
PCDHGB1-201ENST00000523390 RALYLQ86SE5 291 aaKnown RBP15.8■□□□□ 0.12
PCDHGB1-201ENST00000523390 ANXA1P04083 346 aa15.8■□□□□ 0.12
PCDHGB1-201ENST00000523390 FLIIQ13045 1269 aa15.8■□□□□ 0.12
PCDHGB1-201ENST00000523390 FBXW7Q969H0 707 aa15.8■□□□□ 0.12
PCDHGB1-201ENST00000523390 NOL10Q9BSC4 688 aaKnown RBP15.8■□□□□ 0.12
PCDHGB1-201ENST00000523390 NPATQ14207 1427 aa15.8■□□□□ 0.12
PCDHGB1-201ENST00000523390 PHF14O94880 888 aa15.8■□□□□ 0.12
PCDHGB1-201ENST00000523390 KIAA2012Q0VF49 1180 aa15.8■□□□□ 0.12
PCDHGB1-201ENST00000523390 SAMD9LQ8IVG5 1584 aa15.8■□□□□ 0.12
PCDHGB1-201ENST00000523390 ABCC1P33527 1531 aa15.8■□□□□ 0.12
PCDHGB1-201ENST00000523390 NUTM1Q86Y26 1132 aa15.79■□□□□ 0.12
PCDHGB1-201ENST00000523390 CHMP4CQ96CF2 233 aa15.79■□□□□ 0.12
PCDHGB1-201ENST00000523390 MYO5CQ9NQX4 1742 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms