RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 ZBTB7CA1YPR0 619 aa20.32■□□□□ 0.84
CTNNA1-236ENST00000522792 WWC1Q8IX03 1113 aa20.32■□□□□ 0.84
CTNNA1-236ENST00000522792 PNNQ9H307 717 aaKnown RBP20.32■□□□□ 0.84
CTNNA1-236ENST00000522792 LTN1O94822 1766 aa20.32■□□□□ 0.84
CTNNA1-236ENST00000522792 PXDNQ92626 1479 aa20.31■□□□□ 0.84
CTNNA1-236ENST00000522792 HOXC9P31274 260 aa20.31■□□□□ 0.84
CTNNA1-236ENST00000522792 KCNH5Q8NCM2 988 aa20.31■□□□□ 0.84
CTNNA1-236ENST00000522792 SLIT3O75094 1523 aa20.3■□□□□ 0.84
CTNNA1-236ENST00000522792 NEFLP07196 543 aa20.29■□□□□ 0.84
CTNNA1-236ENST00000522792 TMPOP42166 694 aaKnown RBP20.29■□□□□ 0.84
CTNNA1-236ENST00000522792 SPINK5Q9NQ38 1064 aaPredicted RBP20.29■□□□□ 0.84
CTNNA1-236ENST00000522792 USP19O94966 1318 aa20.29■□□□□ 0.84
CTNNA1-236ENST00000522792 GCP02774 474 aa20.29■□□□□ 0.84
CTNNA1-236ENST00000522792 FKBP8Q14318 412 aa20.29■□□□□ 0.84
CTNNA1-236ENST00000522792 AEBP1Q8IUX7 1158 aa20.29■□□□□ 0.84
CTNNA1-236ENST00000522792 KIF24Q5T7B8 1368 aa20.28■□□□□ 0.84
CTNNA1-236ENST00000522792 RGPD1P0DJD0 1748 aa20.28■□□□□ 0.84
CTNNA1-236ENST00000522792 SULT6B1Q6IMI4 303 aa20.28■□□□□ 0.84
CTNNA1-236ENST00000522792 PHACTR3Q96KR7 559 aa20.28■□□□□ 0.84
CTNNA1-236ENST00000522792 TNS3Q68CZ2 1445 aa20.28■□□□□ 0.84
CTNNA1-236ENST00000522792 NEFMP07197 916 aa20.27■□□□□ 0.84
CTNNA1-236ENST00000522792 SLFN5Q08AF3 891 aa20.27■□□□□ 0.84
CTNNA1-236ENST00000522792 LTBP4Q8N2S1 1624 aa20.27■□□□□ 0.84
CTNNA1-236ENST00000522792 DUSP27Q5VZP5 1158 aa20.27■□□□□ 0.84
CTNNA1-236ENST00000522792 LTV1Q96GA3 475 aaPredicted RBP20.27■□□□□ 0.84
CTNNA1-236ENST00000522792 MED1Q15648 1581 aaPredicted RBP20.27■□□□□ 0.83
CTNNA1-236ENST00000522792 RTL1A6NKG5 1358 aa20.27■□□□□ 0.83
CTNNA1-236ENST00000522792 CCDC27Q2M243 656 aa20.26■□□□□ 0.83
CTNNA1-236ENST00000522792 IRX6P78412 446 aaPredicted RBP20.26■□□□□ 0.83
CTNNA1-236ENST00000522792 RIPK4P57078 832 aa20.25■□□□□ 0.83
CTNNA1-236ENST00000522792 PELP1Q8IZL8 1130 aaKnown RBP20.25■□□□□ 0.83
CTNNA1-236ENST00000522792 SPATA31A3Q5VYP0 1347 aa20.25■□□□□ 0.83
CTNNA1-236ENST00000522792 E9PSI1 815 aa20.24■□□□□ 0.83
CTNNA1-236ENST00000522792 IP6K1Q92551 441 aa20.24■□□□□ 0.83
CTNNA1-236ENST00000522792 TRIM35Q9UPQ4 493 aa20.24■□□□□ 0.83
CTNNA1-236ENST00000522792 ARHGEF10O15013 1369 aa20.24■□□□□ 0.83
CTNNA1-236ENST00000522792 NCBP3Q53F19 620 aaKnown RBP20.23■□□□□ 0.83
CTNNA1-236ENST00000522792 CABLES1Q8TDN4 633 aa20.23■□□□□ 0.83
CTNNA1-236ENST00000522792 EYA1Q99502 592 aa20.23■□□□□ 0.83
CTNNA1-236ENST00000522792 RCAN3Q9UKA8 241 aa20.23■□□□□ 0.83
CTNNA1-236ENST00000522792 ARHGEF25Q86VW2 580 aa20.22■□□□□ 0.83
CTNNA1-236ENST00000522792 TRMT2AQ8IZ69 625 aaKnown RBP20.22■□□□□ 0.83
CTNNA1-236ENST00000522792 PHRF1Q9P1Y6 1649 aaKnown RBP20.22■□□□□ 0.83
CTNNA1-236ENST00000522792 NFE2L2Q16236 605 aa20.22■□□□□ 0.83
CTNNA1-236ENST00000522792 WDR63Q8IWG1 891 aa20.22■□□□□ 0.83
CTNNA1-236ENST00000522792 IGSF1Q8N6C5 1336 aa20.21■□□□□ 0.83
CTNNA1-236ENST00000522792 ZC3H6P61129 1189 aaKnown RBP20.21■□□□□ 0.83
CTNNA1-236ENST00000522792 SOS2Q07890 1332 aaPredicted RBP20.21■□□□□ 0.83
CTNNA1-236ENST00000522792 NHSL1Q5SYE7 1610 aa20.19■□□□□ 0.82
CTNNA1-236ENST00000522792 CRYBG1Q9Y4K1 1723 aa20.17■□□□□ 0.82
CTNNA1-236ENST00000522792 USHBP1Q8N6Y0 703 aa20.17■□□□□ 0.82
CTNNA1-236ENST00000522792 KDRP35968 1356 aa20.17■□□□□ 0.82
CTNNA1-236ENST00000522792 RNF123Q5XPI4 1314 aa20.16■□□□□ 0.82
CTNNA1-236ENST00000522792 AXIN2Q9Y2T1 843 aa20.15■□□□□ 0.82
CTNNA1-236ENST00000522792 DLG5Q8TDM6 1919 aa20.15■□□□□ 0.82
CTNNA1-236ENST00000522792 ROBO1Q9Y6N7 1651 aa20.15■□□□□ 0.82
CTNNA1-236ENST00000522792 LRRC59Q96AG4 307 aaKnown RBP20.14■□□□□ 0.81
CTNNA1-236ENST00000522792 THUMPD2Q9BTF0 503 aaKnown RBP20.14■□□□□ 0.81
CTNNA1-236ENST00000522792 NBPF6Q5VWK0 638 aa20.14■□□□□ 0.81
CTNNA1-236ENST00000522792 ANKRD24Q8TF21 1146 aa20.14■□□□□ 0.81
CTNNA1-236ENST00000522792 NBPF4Q96M43 638 aa20.14■□□□□ 0.81
CTNNA1-236ENST00000522792 RGPD2P0DJD1 1756 aa20.14■□□□□ 0.81
CTNNA1-236ENST00000522792 RGPD5Q99666 1765 aa20.13■□□□□ 0.81
CTNNA1-236ENST00000522792 RRP1P56182 461 aaKnown RBP20.13■□□□□ 0.81
CTNNA1-236ENST00000522792 MYH16Q9H6N6 1097 aa20.13■□□□□ 0.81
CTNNA1-236ENST00000522792 FAM83GA6ND36 823 aa20.12■□□□□ 0.81
CTNNA1-236ENST00000522792 TSR2Q969E8 191 aaKnown RBP20.12■□□□□ 0.81
CTNNA1-236ENST00000522792 CHRNA2Q15822 529 aa20.12■□□□□ 0.81
CTNNA1-236ENST00000522792 KIAA0232Q92628 1395 aa20.11■□□□□ 0.81
CTNNA1-236ENST00000522792 LMOD3Q0VAK6 560 aa20.1■□□□□ 0.81
CTNNA1-236ENST00000522792 DCTN1Q14203 1278 aa20.1■□□□□ 0.81
CTNNA1-236ENST00000522792 MTHFSDQ2M296 383 aaKnown RBP20.1■□□□□ 0.81
CTNNA1-236ENST00000522792 IL16Q14005 1332 aa20.1■□□□□ 0.81
CTNNA1-236ENST00000522792 FANCIQ9NVI1 1328 aa20.1■□□□□ 0.81
CTNNA1-236ENST00000522792 HAP1P54257 671 aaPredicted RBP20.09■□□□□ 0.81
CTNNA1-236ENST00000522792 LAS1LQ9Y4W2 734 aaKnown RBP20.09■□□□□ 0.81
CTNNA1-236ENST00000522792 COL18A1P39060 1754 aa20.09■□□□□ 0.81
CTNNA1-236ENST00000522792 ABCA3Q99758 1704 aa20.08■□□□□ 0.81
CTNNA1-236ENST00000522792 PLIN1O60240 522 aa20.07■□□□□ 0.8
CTNNA1-236ENST00000522792 ERBB3P21860 1342 aa20.07■□□□□ 0.8
CTNNA1-236ENST00000522792 CPDO75976 1380 aa20.07■□□□□ 0.8
CTNNA1-236ENST00000522792 AHDC1Q5TGY3 1603 aaPredicted RBP20.06■□□□□ 0.8
CTNNA1-236ENST00000522792 CALD1Q05682 793 aaKnown RBP20.06■□□□□ 0.8
CTNNA1-236ENST00000522792 MCM10Q7L590 875 aa20.06■□□□□ 0.8
CTNNA1-236ENST00000522792 GAS2L2Q8NHY3 880 aa20.05■□□□□ 0.8
CTNNA1-236ENST00000522792 EXOSC9Q06265 439 aaKnown RBP20.05■□□□□ 0.8
CTNNA1-236ENST00000522792 CAMTA1Q9Y6Y1 1673 aa20.04■□□□□ 0.8
CTNNA1-236ENST00000522792 PIP4K2BP78356 416 aa20.04■□□□□ 0.8
CTNNA1-236ENST00000522792 PRDM11Q9NQV5 511 aa20.04■□□□□ 0.8
CTNNA1-236ENST00000522792 BCAR3O75815 825 aa20.03■□□□□ 0.8
CTNNA1-236ENST00000522792 ABCC6O95255 1503 aa20.03■□□□□ 0.8
CTNNA1-236ENST00000522792 CSB-PGBD3P0DP91 1061 aa20.03■□□□□ 0.8
CTNNA1-236ENST00000522792 NCAPD2Q15021 1401 aa20.03■□□□□ 0.8
CTNNA1-236ENST00000522792 IFT57Q9NWB7 429 aa20.02■□□□□ 0.8
CTNNA1-236ENST00000522792 NLRP2Q9NX02 1062 aa20.02■□□□□ 0.8
CTNNA1-236ENST00000522792 TOM1O60784 492 aa20.02■□□□□ 0.79
CTNNA1-236ENST00000522792 GNAI1P63096 354 aa20.02■□□□□ 0.79
CTNNA1-236ENST00000522792 RTF1Q92541 710 aaKnown RBP20.02■□□□□ 0.79
CTNNA1-236ENST00000522792 LMO7Q8WWI1 1683 aa20.01■□□□□ 0.79
CTNNA1-236ENST00000522792 PHLPP1O60346 1717 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms