RNA–Protein interactions for RNA: ENST00000521835.1

DENND3-217, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best)

Gene DENND3, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-217ENST00000521835 GNAI1P63096 354 aa15.23■□□□□ 0.03
DENND3-217ENST00000521835 HSP90AB2PQ58FF8 381 aa15.23■□□□□ 0.03
DENND3-217ENST00000521835 PUS7Q96PZ0 661 aaKnown RBP15.23■□□□□ 0.03
DENND3-217ENST00000521835 HDAC1Q13547 482 aaPredicted RBP15.22■□□□□ 0.03
DENND3-217ENST00000521835 RBM33Q96EV2 1170 aaKnown RBP15.22■□□□□ 0.03
DENND3-217ENST00000521835 CCDC61Q9Y6R9 512 aa15.22■□□□□ 0.03
DENND3-217ENST00000521835 LRRC7Q96NW7 1537 aa15.22■□□□□ 0.03
DENND3-217ENST00000521835 CT47B1P0C2W7 299 aaPredicted RBP15.22■□□□□ 0.03
DENND3-217ENST00000521835 IL13P35225 146 aa15.22■□□□□ 0.03
DENND3-217ENST00000521835 FOXO3O43524 673 aa15.21■□□□□ 0.03
DENND3-217ENST00000521835 ALKQ9UM73 1620 aa15.21■□□□□ 0.03
DENND3-217ENST00000521835 SMARCA5O60264 1052 aaPredicted RBP15.21■□□□□ 0.03
DENND3-217ENST00000521835 SMC5Q8IY18 1101 aa15.21■□□□□ 0.03
DENND3-217ENST00000521835 C16orf71Q8IYS4 520 aaPredicted RBP15.21■□□□□ 0.03
DENND3-217ENST00000521835 MRPL50Q8N5N7 158 aaKnown RBP15.21■□□□□ 0.03
DENND3-217ENST00000521835 AAMPQ13685 434 aa15.2■□□□□ 0.02
DENND3-217ENST00000521835 COL3A1P02461 1466 aaPredicted RBP15.2■□□□□ 0.02
DENND3-217ENST00000521835 NUCB1Q02818 461 aa15.2■□□□□ 0.02
DENND3-217ENST00000521835 FGD1P98174 961 aa15.19■□□□□ 0.02
DENND3-217ENST00000521835 NLRP1Q9C000 1473 aa15.19■□□□□ 0.02
DENND3-217ENST00000521835 IL16Q14005 1332 aa15.19■□□□□ 0.02
DENND3-217ENST00000521835 ARHGAP31Q2M1Z3 1444 aa15.18■□□□□ 0.02
DENND3-217ENST00000521835 F6X3S4 739 aa15.18■□□□□ 0.02
DENND3-217ENST00000521835 ZBTB7BO15156 539 aaPredicted RBP15.18■□□□□ 0.02
DENND3-217ENST00000521835 OTUD7AQ8TE49 926 aaPredicted RBP15.18■□□□□ 0.02
DENND3-217ENST00000521835 PRR36Q9H6K5 1346 aa15.18■□□□□ 0.02
DENND3-217ENST00000521835 ARHGEF40Q8TER5 1519 aa15.18■□□□□ 0.02
DENND3-217ENST00000521835 EIF4A2Q14240 407 aaKnown RBP15.18■□□□□ 0.02
DENND3-217ENST00000521835 CALD1Q05682 793 aaKnown RBP15.17■□□□□ 0.02
DENND3-217ENST00000521835 ALDH1L2Q3SY69 923 aa15.17■□□□□ 0.02
DENND3-217ENST00000521835 SIRT2Q8IXJ6 389 aa15.17■□□□□ 0.02
DENND3-217ENST00000521835 NGDNQ8NEJ9 315 aaKnown RBP15.17■□□□□ 0.02
DENND3-217ENST00000521835 ANTXR1Q9H6X2 564 aa15.17■□□□□ 0.02
DENND3-217ENST00000521835 TMEM131LA2VDJ0 1609 aa15.17■□□□□ 0.02
DENND3-217ENST00000521835 PREX1Q8TCU6 1659 aa15.17■□□□□ 0.02
DENND3-217ENST00000521835 TSHZ3Q63HK5 1081 aa15.17■□□□□ 0.02
DENND3-217ENST00000521835 ZNF428Q96B54 188 aa15.17■□□□□ 0.02
DENND3-217ENST00000521835 ACEP12821 1306 aa15.16■□□□□ 0.02
DENND3-217ENST00000521835 RBM10P98175 930 aaKnown RBP15.16■□□□□ 0.02
DENND3-217ENST00000521835 TBC1D9Q6ZT07 1266 aa15.16■□□□□ 0.02
DENND3-217ENST00000521835 IFT57Q9NWB7 429 aa15.16■□□□□ 0.02
DENND3-217ENST00000521835 CD2BP2O95400 341 aaKnown RBP15.16■□□□□ 0.02
DENND3-217ENST00000521835 CFAP44Q96MT7 982 aa15.15■□□□□ 0.02
DENND3-217ENST00000521835 FAM135BQ49AJ0 1406 aa15.15■□□□□ 0.02
DENND3-217ENST00000521835 PDIA4P13667 645 aaKnown RBP15.15■□□□□ 0.02
DENND3-217ENST00000521835 A2ML1A8K2U0 1454 aa15.15■□□□□ 0.02
DENND3-217ENST00000521835 MCM4P33991 863 aa15.14■□□□□ 0.01
DENND3-217ENST00000521835 AMPHP49418 695 aa15.14■□□□□ 0.01
DENND3-217ENST00000521835 ADGRB2O60241 1585 aa15.14■□□□□ 0.01
DENND3-217ENST00000521835 SLC4A2P04920 1241 aa15.14■□□□□ 0.01
DENND3-217ENST00000521835 TPRNQ4KMQ1 711 aa15.14■□□□□ 0.01
DENND3-217ENST00000521835 FOXD4L5Q5VV16 416 aaPredicted RBP15.14■□□□□ 0.01
DENND3-217ENST00000521835 NOL8Q76FK4 1167 aaKnown RBP15.14■□□□□ 0.01
DENND3-217ENST00000521835 FOXD4L4Q8WXT5 416 aaPredicted RBP15.14■□□□□ 0.01
DENND3-217ENST00000521835 PANK2Q9BZ23 570 aa15.14■□□□□ 0.01
DENND3-217ENST00000521835 CHMP5Q9NZZ3 219 aa15.14■□□□□ 0.01
DENND3-217ENST00000521835 RICTORQ6R327 1708 aa15.14■□□□□ 0.01
DENND3-217ENST00000521835 ZFYVE9O95405 1425 aa15.14■□□□□ 0.01
DENND3-217ENST00000521835 PNPLA6Q8IY17 1366 aa15.14■□□□□ 0.01
DENND3-217ENST00000521835 LMOD3Q0VAK6 560 aa15.14■□□□□ 0.01
DENND3-217ENST00000521835 MEIS3Q99687 375 aa15.14■□□□□ 0.01
DENND3-217ENST00000521835 RTF1Q92541 710 aaKnown RBP15.13■□□□□ 0.01
DENND3-217ENST00000521835 USP32Q8NFA0 1604 aa15.13■□□□□ 0.01
DENND3-217ENST00000521835 ZMYM3Q14202 1370 aa15.13■□□□□ 0.01
DENND3-217ENST00000521835 API5Q9BZZ5 524 aaKnown RBP15.12■□□□□ 0.01
DENND3-217ENST00000521835 TSPYL4Q9UJ04 414 aa15.12■□□□□ 0.01
DENND3-217ENST00000521835 LTKP29376 864 aa15.12■□□□□ 0.01
DENND3-217ENST00000521835 USHBP1Q8N6Y0 703 aa15.12■□□□□ 0.01
DENND3-217ENST00000521835 CPS1P31327 1500 aa15.12■□□□□ 0.01
DENND3-217ENST00000521835 TRAK2O60296 914 aa15.12■□□□□ 0.01
DENND3-217ENST00000521835 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.12■□□□□ 0.01
DENND3-217ENST00000521835 ROBO2Q9HCK4 1378 aa15.11■□□□□ 0.01
DENND3-217ENST00000521835 TTC21BQ7Z4L5 1316 aa15.11■□□□□ 0.01
DENND3-217ENST00000521835 G2E3Q7L622 706 aa15.11■□□□□ 0.01
DENND3-217ENST00000521835 CLTCQ00610 1675 aaKnown RBP15.11■□□□□ 0.01
DENND3-217ENST00000521835 EDC4Q6P2E9 1401 aaKnown RBP15.11■□□□□ 0.01
DENND3-217ENST00000521835 NCLP19338 710 aaKnown RBP15.1■□□□□ 0.01
DENND3-217ENST00000521835 MAP2P11137 1827 aaKnown RBP15.1■□□□□ 0.01
DENND3-217ENST00000521835 GCC1Q96CN9 775 aa15.1■□□□□ 0.01
DENND3-217ENST00000521835 GOLGA6L3A6NEY3 463 aa15.1■□□□□ 0.01
DENND3-217ENST00000521835 EXOC6BQ9Y2D4 811 aa15.09■□□□□ 0.01
DENND3-217ENST00000521835 GSPT1P15170 499 aaKnown RBP15.09■□□□□ 0.01
DENND3-217ENST00000521835 HDGFP51858 240 aaKnown RBP15.09■□□□□ 0.01
DENND3-217ENST00000521835 BMP2KLQ5H9B9 411 aa15.09■□□□□ 0.01
DENND3-217ENST00000521835 LMOD2Q6P5Q4 547 aa15.09■□□□□ 0.01
DENND3-217ENST00000521835 NLRP6P59044 892 aa15.08■□□□□ 0.01
DENND3-217ENST00000521835 MSH6P52701 1360 aa15.08■□□□□ 0
DENND3-217ENST00000521835 FOXD4L6Q3SYB3 417 aaPredicted RBP15.07■□□□□ 0
DENND3-217ENST00000521835 FOXD4L3Q6VB84 417 aaPredicted RBP15.07■□□□□ 0
DENND3-217ENST00000521835 TNPO1Q92973 898 aaKnown RBP15.07■□□□□ 0
DENND3-217ENST00000521835 CDC45O75419 566 aa15.07■□□□□ 0
DENND3-217ENST00000521835 ZNF853P0CG23 659 aa15.07■□□□□ 0
DENND3-217ENST00000521835 FKBP5Q13451 457 aaPredicted RBP15.07■□□□□ 0
DENND3-217ENST00000521835 MTHFSDQ2M296 383 aaKnown RBP15.07■□□□□ 0
DENND3-217ENST00000521835 BCL11BQ9C0K0 894 aaPredicted RBP15.07■□□□□ 0
DENND3-217ENST00000521835 AMOTL2Q9Y2J4 779 aa15.07■□□□□ 0
DENND3-217ENST00000521835 ABCC4O15439 1325 aa15.07■□□□□ 0
DENND3-217ENST00000521835 SSFA2P28290 1259 aa15.06■□□□□ 0
DENND3-217ENST00000521835 CHMP4BQ9H444 224 aaKnown RBP15.06■□□□□ 0
DENND3-217ENST00000521835 MAP3K19Q56UN5 1328 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms